RNA–Protein interactions for RNA: ENST00000462451.1

VAMP5-202, Transcript of vesicle associated membrane protein 5, humanhuman

TSL 2

Gene VAMP5, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5-202ENST00000462451 LTN1O94822 1766 aa16.49■□□□□ 0.23
VAMP5-202ENST00000462451 MAP3K19Q56UN5 1328 aa16.48■□□□□ 0.23
VAMP5-202ENST00000462451 HOXC9P31274 260 aa16.48■□□□□ 0.23
VAMP5-202ENST00000462451 NSD2O96028 1365 aa16.48■□□□□ 0.23
VAMP5-202ENST00000462451 YBX3P16989 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
VAMP5-202ENST00000462451 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
VAMP5-202ENST00000462451 CCNL1Q9UK58 526 aaPredicted RBP16.47■□□□□ 0.23
VAMP5-202ENST00000462451 AMPHP49418 695 aa16.46■□□□□ 0.23
VAMP5-202ENST00000462451 COG3Q96JB2 828 aa16.46■□□□□ 0.23
VAMP5-202ENST00000462451 MSH5O43196 834 aa16.45■□□□□ 0.22
VAMP5-202ENST00000462451 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
VAMP5-202ENST00000462451 CEP350Q5VT06 3117 aa16.44■□□□□ 0.22
VAMP5-202ENST00000462451 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
VAMP5-202ENST00000462451 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
VAMP5-202ENST00000462451 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
VAMP5-202ENST00000462451 MSL1Q68DK7 614 aa16.43■□□□□ 0.22
VAMP5-202ENST00000462451 QSER1Q2KHR3 1735 aa16.42■□□□□ 0.22
VAMP5-202ENST00000462451 MEGF6O75095 1541 aa16.42■□□□□ 0.22
VAMP5-202ENST00000462451 TESK2Q96S53 571 aa16.42■□□□□ 0.22
VAMP5-202ENST00000462451 USP47Q96K76 1375 aa16.41■□□□□ 0.22
VAMP5-202ENST00000462451 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
VAMP5-202ENST00000462451 RRS1Q15050 365 aaKnown RBP16.4■□□□□ 0.22
VAMP5-202ENST00000462451 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
VAMP5-202ENST00000462451 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
VAMP5-202ENST00000462451 IFFO2Q5TF58 517 aa16.39■□□□□ 0.21
VAMP5-202ENST00000462451 TUBGCP6Q96RT7 1819 aa16.39■□□□□ 0.21
VAMP5-202ENST00000462451 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.21
VAMP5-202ENST00000462451 LY75O60449 1722 aa16.39■□□□□ 0.21
VAMP5-202ENST00000462451 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
VAMP5-202ENST00000462451 FYB1O15117 783 aa16.38■□□□□ 0.21
VAMP5-202ENST00000462451 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
VAMP5-202ENST00000462451 CD2APQ9Y5K6 639 aa16.38■□□□□ 0.21
VAMP5-202ENST00000462451 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
VAMP5-202ENST00000462451 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
VAMP5-202ENST00000462451 FLAD1Q8NFF5 587 aa16.36■□□□□ 0.21
VAMP5-202ENST00000462451 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
VAMP5-202ENST00000462451 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
VAMP5-202ENST00000462451 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
VAMP5-202ENST00000462451 HSP90AB2PQ58FF8 381 aa16.35■□□□□ 0.21
VAMP5-202ENST00000462451 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
VAMP5-202ENST00000462451 CYP27B1O15528 508 aa16.34■□□□□ 0.21
VAMP5-202ENST00000462451 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
VAMP5-202ENST00000462451 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
VAMP5-202ENST00000462451 TONSLQ96HA7 1378 aa16.34■□□□□ 0.21
VAMP5-202ENST00000462451 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.21
VAMP5-202ENST00000462451 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
VAMP5-202ENST00000462451 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.2
VAMP5-202ENST00000462451 SMIM5Q71RC9 77 aa16.33■□□□□ 0.2
VAMP5-202ENST00000462451 GPBP1L1Q9HC44 474 aaPredicted RBP16.33■□□□□ 0.2
VAMP5-202ENST00000462451 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.2
VAMP5-202ENST00000462451 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.2
VAMP5-202ENST00000462451 INSRP06213 1382 aa16.31■□□□□ 0.2
VAMP5-202ENST00000462451 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
VAMP5-202ENST00000462451 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
VAMP5-202ENST00000462451 PIGBQ92521 554 aa16.3■□□□□ 0.2
VAMP5-202ENST00000462451 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
VAMP5-202ENST00000462451 AK7Q96M32 723 aa16.3■□□□□ 0.2
VAMP5-202ENST00000462451 WWC3Q9ULE0 1092 aa16.3■□□□□ 0.2
VAMP5-202ENST00000462451 ADCY9O60503 1353 aa16.29■□□□□ 0.2
VAMP5-202ENST00000462451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.29■□□□□ 0.2
VAMP5-202ENST00000462451 PHF14O94880 888 aa16.29■□□□□ 0.2
VAMP5-202ENST00000462451 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
VAMP5-202ENST00000462451 HSPA6P17066 643 aa16.28■□□□□ 0.2
VAMP5-202ENST00000462451 FLT4P35916 1363 aa16.27■□□□□ 0.2
VAMP5-202ENST00000462451 TMF1P82094 1093 aa16.27■□□□□ 0.2
VAMP5-202ENST00000462451 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
VAMP5-202ENST00000462451 C5P01031 1676 aa16.27■□□□□ 0.19
VAMP5-202ENST00000462451 LINC00116Q8NCU8 138 aa16.26■□□□□ 0.19
VAMP5-202ENST00000462451 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
VAMP5-202ENST00000462451 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
VAMP5-202ENST00000462451 LOC102724428A0A0B4J2F2 783 aa16.25■□□□□ 0.19
VAMP5-202ENST00000462451 SSFA2P28290 1259 aa16.25■□□□□ 0.19
VAMP5-202ENST00000462451 SIK1P57059 783 aa16.25■□□□□ 0.19
VAMP5-202ENST00000462451 CARD14Q9BXL6 1004 aa16.25■□□□□ 0.19
VAMP5-202ENST00000462451 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
VAMP5-202ENST00000462451 ITPK1Q13572 414 aa16.23■□□□□ 0.19
VAMP5-202ENST00000462451 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
VAMP5-202ENST00000462451 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
VAMP5-202ENST00000462451 KIF3CO14782 793 aa16.22■□□□□ 0.19
VAMP5-202ENST00000462451 PPM1GO15355 546 aaPredicted RBP16.22■□□□□ 0.19
VAMP5-202ENST00000462451 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
VAMP5-202ENST00000462451 GNPATO15228 680 aa16.21■□□□□ 0.19
VAMP5-202ENST00000462451 EYA1Q99502 592 aa16.21■□□□□ 0.19
VAMP5-202ENST00000462451 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
VAMP5-202ENST00000462451 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
VAMP5-202ENST00000462451 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
VAMP5-202ENST00000462451 MMP10P09238 476 aa16.2■□□□□ 0.18
VAMP5-202ENST00000462451 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
VAMP5-202ENST00000462451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.2■□□□□ 0.18
VAMP5-202ENST00000462451 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
VAMP5-202ENST00000462451 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
VAMP5-202ENST00000462451 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
VAMP5-202ENST00000462451 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
VAMP5-202ENST00000462451 PHKG2P15735 406 aa16.18■□□□□ 0.18
VAMP5-202ENST00000462451 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
VAMP5-202ENST00000462451 UBR3Q6ZT12 1888 aa16.18■□□□□ 0.18
VAMP5-202ENST00000462451 ITGB4P16144 1822 aa16.17■□□□□ 0.18
VAMP5-202ENST00000462451 A0A0G2JLW4 131 aa16.16■□□□□ 0.18
VAMP5-202ENST00000462451 TGFB2P61812 414 aa16.16■□□□□ 0.18
VAMP5-202ENST00000462451 TRAPPC3LQ5T215 181 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms