RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
CHRD-209ENST00000461120 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
CHRD-209ENST00000461120 NLRP2Q9NX02 1062 aa18.56■□□□□ 0.56
CHRD-209ENST00000461120 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
CHRD-209ENST00000461120 CARD10Q9BWT7 1032 aa18.55■□□□□ 0.56
CHRD-209ENST00000461120 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
CHRD-209ENST00000461120 DIEXFQ68CQ4 756 aaKnown RBP18.54■□□□□ 0.56
CHRD-209ENST00000461120 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
CHRD-209ENST00000461120 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
CHRD-209ENST00000461120 RGPD2P0DJD1 1756 aa18.54■□□□□ 0.56
CHRD-209ENST00000461120 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
CHRD-209ENST00000461120 IL13P35225 146 aa18.53■□□□□ 0.56
CHRD-209ENST00000461120 TCP11L2Q8N4U5 519 aa18.53■□□□□ 0.56
CHRD-209ENST00000461120 USP35Q9P2H5 1018 aa18.53■□□□□ 0.56
CHRD-209ENST00000461120 CASZ1Q86V15 1759 aa18.53■□□□□ 0.56
CHRD-209ENST00000461120 PDE3BQ13370 1112 aa18.52■□□□□ 0.56
CHRD-209ENST00000461120 EYA1Q99502 592 aa18.52■□□□□ 0.56
CHRD-209ENST00000461120 HSPA6P17066 643 aa18.51■□□□□ 0.55
CHRD-209ENST00000461120 GPR162Q16538 588 aa18.51■□□□□ 0.55
CHRD-209ENST00000461120 THRAP3Q9Y2W1 955 aaKnown RBP18.51■□□□□ 0.55
CHRD-209ENST00000461120 BARGINQ6ZT62 677 aa18.5■□□□□ 0.55
CHRD-209ENST00000461120 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
CHRD-209ENST00000461120 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
CHRD-209ENST00000461120 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
CHRD-209ENST00000461120 CAPN15O75808 1086 aa18.49■□□□□ 0.55
CHRD-209ENST00000461120 ZBTB7AO95365 584 aa18.49■□□□□ 0.55
CHRD-209ENST00000461120 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
CHRD-209ENST00000461120 WNK3Q9BYP7 1800 aa18.47■□□□□ 0.55
CHRD-209ENST00000461120 RGPD3A6NKT7 1758 aaPredicted RBP18.46■□□□□ 0.55
CHRD-209ENST00000461120 RGPD4Q7Z3J3 1758 aa18.46■□□□□ 0.55
CHRD-209ENST00000461120 PTGER2P43116 358 aa18.46■□□□□ 0.55
CHRD-209ENST00000461120 NUDCQ9Y266 331 aa18.46■□□□□ 0.55
CHRD-209ENST00000461120 U2SURPO15042 1029 aaKnown RBP18.45■□□□□ 0.54
CHRD-209ENST00000461120 SLC34A2O95436 690 aa18.45■□□□□ 0.54
CHRD-209ENST00000461120 IL2RBP14784 551 aa18.45■□□□□ 0.54
CHRD-209ENST00000461120 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
CHRD-209ENST00000461120 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
CHRD-209ENST00000461120 SULT6B1Q6IMI4 303 aa18.44■□□□□ 0.54
CHRD-209ENST00000461120 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
CHRD-209ENST00000461120 MEGF6O75095 1541 aa18.44■□□□□ 0.54
CHRD-209ENST00000461120 KDRP35968 1356 aa18.43■□□□□ 0.54
CHRD-209ENST00000461120 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
CHRD-209ENST00000461120 RAPGEF4Q8WZA2 1011 aa18.43■□□□□ 0.54
CHRD-209ENST00000461120 BCL11BQ9C0K0 894 aaPredicted RBP18.42■□□□□ 0.54
CHRD-209ENST00000461120 PARP4Q9UKK3 1724 aaKnown RBP18.42■□□□□ 0.54
CHRD-209ENST00000461120 HMOX1P09601 288 aa18.41■□□□□ 0.54
CHRD-209ENST00000461120 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
CHRD-209ENST00000461120 TATP17735 454 aaPredicted RBP18.41■□□□□ 0.54
CHRD-209ENST00000461120 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHRD-209ENST00000461120 LRRC37A3O60309 1634 aa18.41■□□□□ 0.54
CHRD-209ENST00000461120 OVOS2A0A0G2JMS6 1433 aa18.4■□□□□ 0.54
CHRD-209ENST00000461120 PRELPP51888 382 aa18.4■□□□□ 0.54
CHRD-209ENST00000461120 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
CHRD-209ENST00000461120 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
CHRD-209ENST00000461120 PCDH10Q9P2E7 1040 aa18.4■□□□□ 0.54
CHRD-209ENST00000461120 PLSCR1O15162 318 aa18.39■□□□□ 0.53
CHRD-209ENST00000461120 DDB1Q16531 1140 aa18.39■□□□□ 0.53
CHRD-209ENST00000461120 ARXQ96QS3 562 aa18.39■□□□□ 0.53
CHRD-209ENST00000461120 EXOC5O00471 708 aa18.38■□□□□ 0.53
CHRD-209ENST00000461120 MIER1Q8N108 512 aa18.38■□□□□ 0.53
CHRD-209ENST00000461120 PLEKHG2Q9H7P9 1386 aa18.38■□□□□ 0.53
CHRD-209ENST00000461120 TNS2Q63HR2 1409 aa18.38■□□□□ 0.53
CHRD-209ENST00000461120 GOLGB1Q14789 3259 aaKnown RBP18.37■□□□□ 0.53
CHRD-209ENST00000461120 WDR43Q15061 677 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHRD-209ENST00000461120 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
CHRD-209ENST00000461120 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
CHRD-209ENST00000461120 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
CHRD-209ENST00000461120 GPBP1L1Q9HC44 474 aaPredicted RBP18.37■□□□□ 0.53
CHRD-209ENST00000461120 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
CHRD-209ENST00000461120 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
CHRD-209ENST00000461120 FCHSD2O94868 740 aa18.36■□□□□ 0.53
CHRD-209ENST00000461120 PKD1L3Q7Z443 1732 aa18.36■□□□□ 0.53
CHRD-209ENST00000461120 PDGFDQ9GZP0 370 aaPredicted RBP18.36■□□□□ 0.53
CHRD-209ENST00000461120 STK32BQ9NY57 414 aa18.36■□□□□ 0.53
CHRD-209ENST00000461120 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
CHRD-209ENST00000461120 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
CHRD-209ENST00000461120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHRD-209ENST00000461120 TNS4Q8IZW8 715 aa18.34■□□□□ 0.53
CHRD-209ENST00000461120 PNISRQ8TF01 805 aaKnown RBP18.34■□□□□ 0.53
CHRD-209ENST00000461120 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
CHRD-209ENST00000461120 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
CHRD-209ENST00000461120 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.52
CHRD-209ENST00000461120 ADAMTS8Q9UP79 889 aa18.33■□□□□ 0.52
CHRD-209ENST00000461120 MARCH10Q8NA82 808 aaPredicted RBP18.32■□□□□ 0.52
CHRD-209ENST00000461120 SBF2Q86WG5 1849 aa18.32■□□□□ 0.52
CHRD-209ENST00000461120 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
CHRD-209ENST00000461120 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
CHRD-209ENST00000461120 GRIN3BO60391 1043 aa18.31■□□□□ 0.52
CHRD-209ENST00000461120 APLP1P51693 650 aa18.31■□□□□ 0.52
CHRD-209ENST00000461120 DDX54Q8TDD1 881 aaKnown RBP18.31■□□□□ 0.52
CHRD-209ENST00000461120 CYP27B1O15528 508 aa18.3■□□□□ 0.52
CHRD-209ENST00000461120 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
CHRD-209ENST00000461120 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
CHRD-209ENST00000461120 PNNQ9H307 717 aaKnown RBP18.3■□□□□ 0.52
CHRD-209ENST00000461120 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
CHRD-209ENST00000461120 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
CHRD-209ENST00000461120 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
CHRD-209ENST00000461120 SGIP1Q9BQI5 828 aa18.29■□□□□ 0.52
CHRD-209ENST00000461120 ATP10DQ9P241 1426 aa18.29■□□□□ 0.52
CHRD-209ENST00000461120 SLC15A2Q16348 729 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms