RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 KIF24Q5T7B8 1368 aa7.92□□□□□ -1.14
NXF3-203ENST00000460791 PARD3Q8TEW0 1356 aa7.92□□□□□ -1.14
NXF3-203ENST00000460791 VIRMAQ69YN4 1812 aaKnown RBP7.92□□□□□ -1.14
NXF3-203ENST00000460791 TATP17735 454 aaPredicted RBP7.91□□□□□ -1.14
NXF3-203ENST00000460791 RALBP1Q15311 655 aa7.91□□□□□ -1.14
NXF3-203ENST00000460791 ZCRB1Q8TBF4 217 aaKnown RBP7.91□□□□□ -1.14
NXF3-203ENST00000460791 CFAP53Q96M91 514 aa7.91□□□□□ -1.14
NXF3-203ENST00000460791 PRKRIP1Q9H875 184 aaPredicted RBP7.91□□□□□ -1.14
NXF3-203ENST00000460791 DISP2A7MBM2 1401 aa7.91□□□□□ -1.14
NXF3-203ENST00000460791 SHANK3Q9BYB0 1731 aa7.9□□□□□ -1.14
NXF3-203ENST00000460791 LRRC37A3O60309 1634 aa7.9□□□□□ -1.14
NXF3-203ENST00000460791 MEGF6O75095 1541 aa7.9□□□□□ -1.14
NXF3-203ENST00000460791 SOCS7O14512 581 aa7.9□□□□□ -1.14
NXF3-203ENST00000460791 CDCA7Q9BWT1 371 aaPredicted RBP7.9□□□□□ -1.14
NXF3-203ENST00000460791 IGSF1Q8N6C5 1336 aa7.89□□□□□ -1.15
NXF3-203ENST00000460791 MYBBP1AQ9BQG0 1328 aaKnown RBP7.89□□□□□ -1.15
NXF3-203ENST00000460791 TRIM37O94972 964 aa7.89□□□□□ -1.15
NXF3-203ENST00000460791 U2AF1L5P0DN76 240 aaPredicted RBP7.89□□□□□ -1.15
NXF3-203ENST00000460791 U2AF1Q01081 240 aaKnown RBP eCLIP7.89□□□□□ -1.15
NXF3-203ENST00000460791 CCDC184Q52MB2 194 aa7.89□□□□□ -1.15
NXF3-203ENST00000460791 PTF1AQ7RTS3 328 aa7.89□□□□□ -1.15
NXF3-203ENST00000460791 UPF1Q92900 1129 aaKnown RBP eCLIP7.89□□□□□ -1.15
NXF3-203ENST00000460791 ACSBG1Q96GR2 724 aa7.89□□□□□ -1.15
NXF3-203ENST00000460791 ITGB4P16144 1822 aa7.89□□□□□ -1.15
NXF3-203ENST00000460791 RGPD1P0DJD0 1748 aa7.89□□□□□ -1.15
NXF3-203ENST00000460791 COL3A1P02461 1466 aaPredicted RBP7.88□□□□□ -1.15
NXF3-203ENST00000460791 ANP32CO43423 234 aa7.88□□□□□ -1.15
NXF3-203ENST00000460791 KCNQ2O43526 872 aa7.88□□□□□ -1.15
NXF3-203ENST00000460791 FAM196AQ6ZSG2 479 aa7.88□□□□□ -1.15
NXF3-203ENST00000460791 NUDCQ9Y266 331 aa7.88□□□□□ -1.15
NXF3-203ENST00000460791 DLG5Q8TDM6 1919 aa7.88□□□□□ -1.15
NXF3-203ENST00000460791 CYP27B1O15528 508 aa7.87□□□□□ -1.15
NXF3-203ENST00000460791 ZNF530Q6P9A1 599 aaPredicted RBP7.87□□□□□ -1.15
NXF3-203ENST00000460791 DEFB132Q7Z7B7 95 aa7.87□□□□□ -1.15
NXF3-203ENST00000460791 OVOS2A0A0G2JMS6 1433 aa7.86□□□□□ -1.15
NXF3-203ENST00000460791 TNS2Q63HR2 1409 aa7.86□□□□□ -1.15
NXF3-203ENST00000460791 PKD1L3Q7Z443 1732 aa7.86□□□□□ -1.15
NXF3-203ENST00000460791 PRKAR2BP31323 418 aa7.86□□□□□ -1.15
NXF3-203ENST00000460791 PRIM1P49642 420 aaKnown RBP7.86□□□□□ -1.15
NXF3-203ENST00000460791 PLEKHO1Q53GL0 409 aaPredicted RBP7.86□□□□□ -1.15
NXF3-203ENST00000460791 SYTL4Q96C24 671 aaPredicted RBP7.86□□□□□ -1.15
NXF3-203ENST00000460791 SPG7Q9UQ90 795 aa7.86□□□□□ -1.15
NXF3-203ENST00000460791 BTAF1O14981 1849 aa7.86□□□□□ -1.15
NXF3-203ENST00000460791 NCAPD2Q15021 1401 aa7.86□□□□□ -1.15
NXF3-203ENST00000460791 SENP3-EIF4A1A0A087X0R7 540 aa7.85□□□□□ -1.15
NXF3-203ENST00000460791 APBA3O96018 575 aa7.85□□□□□ -1.15
NXF3-203ENST00000460791 SF3B2Q13435 895 aaKnown RBP7.85□□□□□ -1.15
NXF3-203ENST00000460791 MTHFSDQ2M296 383 aaKnown RBP7.85□□□□□ -1.15
NXF3-203ENST00000460791 PHACTR3Q96KR7 559 aa7.85□□□□□ -1.15
NXF3-203ENST00000460791 RSPH6AQ9H0K4 717 aa7.85□□□□□ -1.15
NXF3-203ENST00000460791 DOT1LQ8TEK3 1739 aa7.85□□□□□ -1.15
NXF3-203ENST00000460791 PCDH11XQ9BZA7 1347 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 PCDH11YQ9BZA8 1340 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 SLC4A2P04920 1241 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 PHKG2P15735 406 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 EN1Q05925 392 aaPredicted RBP7.84□□□□□ -1.15
NXF3-203ENST00000460791 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
NXF3-203ENST00000460791 MPRIPQ6WCQ1 1025 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 CCDC146Q8IYE0 955 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 IFNL2Q8IZJ0 200 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 SCN11AQ9UI33 1791 aa7.84□□□□□ -1.15
NXF3-203ENST00000460791 KDRP35968 1356 aa7.84□□□□□ -1.16
NXF3-203ENST00000460791 TNS1Q9HBL0 1735 aaKnown RBP7.83□□□□□ -1.16
NXF3-203ENST00000460791 TOGARAM1Q9Y4F4 1720 aa7.83□□□□□ -1.16
NXF3-203ENST00000460791 WDR43Q15061 677 aaKnown RBP eCLIP7.83□□□□□ -1.16
NXF3-203ENST00000460791 AMOTQ4VCS5 1084 aa7.83□□□□□ -1.16
NXF3-203ENST00000460791 C1orf141Q5JVX7 400 aa7.83□□□□□ -1.16
NXF3-203ENST00000460791 MIER1Q8N108 512 aa7.83□□□□□ -1.16
NXF3-203ENST00000460791 MRS2Q9HD23 443 aa7.83□□□□□ -1.16
NXF3-203ENST00000460791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.16
NXF3-203ENST00000460791 ADAMTS8Q9UP79 889 aa7.83□□□□□ -1.16
NXF3-203ENST00000460791 FCHSD2O94868 740 aa7.82□□□□□ -1.16
NXF3-203ENST00000460791 MYCNP04198 464 aaPredicted RBP7.82□□□□□ -1.16
NXF3-203ENST00000460791 KCNQ4P56696 695 aa7.82□□□□□ -1.16
NXF3-203ENST00000460791 EZH2Q15910 746 aaKnown RBP7.82□□□□□ -1.16
NXF3-203ENST00000460791 BCL11BQ9C0K0 894 aaPredicted RBP7.82□□□□□ -1.16
NXF3-203ENST00000460791 LGR6Q9HBX8 967 aa7.82□□□□□ -1.16
NXF3-203ENST00000460791 NHSQ6T4R5 1651 aa7.82□□□□□ -1.16
NXF3-203ENST00000460791 BAG6P46379 1132 aa7.81□□□□□ -1.16
NXF3-203ENST00000460791 DCTN1Q14203 1278 aa7.81□□□□□ -1.16
NXF3-203ENST00000460791 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
NXF3-203ENST00000460791 AKAP4Q5JQC9 854 aa7.81□□□□□ -1.16
NXF3-203ENST00000460791 CCDC125Q86Z20 511 aa7.81□□□□□ -1.16
NXF3-203ENST00000460791 PIGBQ92521 554 aa7.81□□□□□ -1.16
NXF3-203ENST00000460791 RRP7AQ9Y3A4 280 aaKnown RBP7.81□□□□□ -1.16
NXF3-203ENST00000460791 RNMTO43148 476 aaKnown RBP7.8□□□□□ -1.16
NXF3-203ENST00000460791 ATXN8OSP0DMR3 200 aa7.8□□□□□ -1.16
NXF3-203ENST00000460791 CABP4P57796 275 aa7.8□□□□□ -1.16
NXF3-203ENST00000460791 NKX1-1Q15270 411 aaPredicted RBP7.8□□□□□ -1.16
NXF3-203ENST00000460791 FAM9BQ8IZU0 186 aa7.8□□□□□ -1.16
NXF3-203ENST00000460791 GAS2L2Q8NHY3 880 aa7.8□□□□□ -1.16
NXF3-203ENST00000460791 PLEKHF1Q96S99 279 aa7.8□□□□□ -1.16
NXF3-203ENST00000460791 MAPK8IP3Q9UPT6 1336 aa7.79□□□□□ -1.16
NXF3-203ENST00000460791 KDM6AO15550 1401 aaPredicted RBP7.79□□□□□ -1.16
NXF3-203ENST00000460791 GNAT3A8MTJ3 354 aa7.79□□□□□ -1.16
NXF3-203ENST00000460791 NEFMP07197 916 aa7.79□□□□□ -1.16
NXF3-203ENST00000460791 HSP90AB1P08238 724 aaKnown RBP7.79□□□□□ -1.16
NXF3-203ENST00000460791 MCM10Q7L590 875 aa7.79□□□□□ -1.16
NXF3-203ENST00000460791 PROM2Q8N271 834 aa7.79□□□□□ -1.16
NXF3-203ENST00000460791 NFATC2IPQ8NCF5 419 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms