RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 SYT17Q9BSW7 474 aa22.79■■□□□ 1.24
RUNX1-209ENST00000460207 PAPPAQ13219 1627 aa22.79■■□□□ 1.24
RUNX1-209ENST00000460207 INSRP06213 1382 aa22.77■■□□□ 1.24
RUNX1-209ENST00000460207 ZNF827Q17R98 1081 aa22.77■■□□□ 1.24
RUNX1-209ENST00000460207 RAPGEF4Q8WZA2 1011 aa22.77■■□□□ 1.24
RUNX1-209ENST00000460207 SYTL4Q96C24 671 aaPredicted RBP22.77■■□□□ 1.24
RUNX1-209ENST00000460207 FHDC1Q9C0D6 1143 aaPredicted RBP22.77■■□□□ 1.24
RUNX1-209ENST00000460207 CLSPNQ9HAW4 1339 aa22.77■■□□□ 1.24
RUNX1-209ENST00000460207 SMG6Q86US8 1419 aaKnown RBP22.76■■□□□ 1.23
RUNX1-209ENST00000460207 ARXQ96QS3 562 aa22.76■■□□□ 1.23
RUNX1-209ENST00000460207 CARD14Q9BXL6 1004 aa22.76■■□□□ 1.23
RUNX1-209ENST00000460207 HSP90AB2PQ58FF8 381 aa22.75■■□□□ 1.23
RUNX1-209ENST00000460207 RGPD2P0DJD1 1756 aa22.75■■□□□ 1.23
RUNX1-209ENST00000460207 MYOM1P52179 1685 aa22.74■■□□□ 1.23
RUNX1-209ENST00000460207 MEGF6O75095 1541 aa22.74■■□□□ 1.23
RUNX1-209ENST00000460207 FLT4P35916 1363 aa22.74■■□□□ 1.23
RUNX1-209ENST00000460207 TATP17735 454 aaPredicted RBP22.73■■□□□ 1.23
RUNX1-209ENST00000460207 HMGB2P26583 209 aaKnown RBP22.73■■□□□ 1.23
RUNX1-209ENST00000460207 NSD2O96028 1365 aa22.72■■□□□ 1.23
RUNX1-209ENST00000460207 MAP3K5Q99683 1374 aa22.72■■□□□ 1.23
RUNX1-209ENST00000460207 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
RUNX1-209ENST00000460207 USHBP1Q8N6Y0 703 aa22.7■■□□□ 1.22
RUNX1-209ENST00000460207 SHANK3Q9BYB0 1731 aa22.69■■□□□ 1.22
RUNX1-209ENST00000460207 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
RUNX1-209ENST00000460207 QSER1Q2KHR3 1735 aa22.68■■□□□ 1.22
RUNX1-209ENST00000460207 PCDH11XQ9BZA7 1347 aa22.68■■□□□ 1.22
RUNX1-209ENST00000460207 PCDH11YQ9BZA8 1340 aa22.68■■□□□ 1.22
RUNX1-209ENST00000460207 KCNQ4P56696 695 aa22.68■■□□□ 1.22
RUNX1-209ENST00000460207 CCNL1Q9UK58 526 aaPredicted RBP22.68■■□□□ 1.22
RUNX1-209ENST00000460207 KIF20BQ96Q89 1820 aa22.68■■□□□ 1.22
RUNX1-209ENST00000460207 LY75O60449 1722 aa22.68■■□□□ 1.22
RUNX1-209ENST00000460207 POLD1P28340 1107 aa22.67■■□□□ 1.22
RUNX1-209ENST00000460207 DOT1LQ8TEK3 1739 aa22.67■■□□□ 1.22
RUNX1-209ENST00000460207 NSD3Q9BZ95 1437 aa22.66■■□□□ 1.22
RUNX1-209ENST00000460207 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
RUNX1-209ENST00000460207 UTRNP46939 3433 aa22.65■■□□□ 1.22
RUNX1-209ENST00000460207 WASHC2AQ641Q2 1341 aa22.64■■□□□ 1.22
RUNX1-209ENST00000460207 CYP27B1O15528 508 aa22.64■■□□□ 1.21
RUNX1-209ENST00000460207 PCGF6Q9BYE7 350 aa22.62■■□□□ 1.21
RUNX1-209ENST00000460207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.62■■□□□ 1.211e-7■■■□□ 16.2
RUNX1-209ENST00000460207 COL24A1Q17RW2 1714 aa22.62■■□□□ 1.21
RUNX1-209ENST00000460207 PPM1GO15355 546 aaPredicted RBP22.61■■□□□ 1.21
RUNX1-209ENST00000460207 NCAPD2Q15021 1401 aa22.61■■□□□ 1.21
RUNX1-209ENST00000460207 NKX1-1Q15270 411 aaPredicted RBP22.61■■□□□ 1.21
RUNX1-209ENST00000460207 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
RUNX1-209ENST00000460207 SPG7Q9UQ90 795 aa22.6■■□□□ 1.21
RUNX1-209ENST00000460207 MPRIPQ6WCQ1 1025 aa22.59■■□□□ 1.21
RUNX1-209ENST00000460207 COL23A1Q86Y22 540 aaPredicted RBP22.59■■□□□ 1.21
RUNX1-209ENST00000460207 FLAD1Q8NFF5 587 aa22.59■■□□□ 1.21
RUNX1-209ENST00000460207 POLKQ9UBT6 870 aa22.59■■□□□ 1.21
RUNX1-209ENST00000460207 EYA1Q99502 592 aa22.58■■□□□ 1.21
RUNX1-209ENST00000460207 CHD4Q14839 1912 aa22.57■■□□□ 1.2
RUNX1-209ENST00000460207 MAP2P11137 1827 aaKnown RBP22.57■■□□□ 1.2
RUNX1-209ENST00000460207 PALLDQ8WX93 1383 aa22.56■■□□□ 1.2
RUNX1-209ENST00000460207 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
RUNX1-209ENST00000460207 GPR162Q16538 588 aa22.56■■□□□ 1.2
RUNX1-209ENST00000460207 ZNF784Q8NCA9 323 aaPredicted RBP22.56■■□□□ 1.2
RUNX1-209ENST00000460207 TUBGCP6Q96RT7 1819 aa22.56■■□□□ 1.2
RUNX1-209ENST00000460207 ANKRD26Q9UPS8 1709 aa22.55■■□□□ 1.2
RUNX1-209ENST00000460207 MSH5O43196 834 aa22.55■■□□□ 1.2
RUNX1-209ENST00000460207 PIGBQ92521 554 aa22.54■■□□□ 1.2
RUNX1-209ENST00000460207 PKD1L3Q7Z443 1732 aa22.53■■□□□ 1.2
RUNX1-209ENST00000460207 PLEKHG2Q9H7P9 1386 aa22.52■■□□□ 1.2
RUNX1-209ENST00000460207 KLHL34Q8N239 644 aa22.52■■□□□ 1.2
RUNX1-209ENST00000460207 POLR3GLQ9BT43 218 aa22.52■■□□□ 1.2
RUNX1-209ENST00000460207 IFNL2Q8IZJ0 200 aa22.51■■□□□ 1.19
RUNX1-209ENST00000460207 ITGB4P16144 1822 aa22.51■■□□□ 1.19
RUNX1-209ENST00000460207 GOLGB1Q14789 3259 aaKnown RBP22.5■■□□□ 1.19
RUNX1-209ENST00000460207 PANK3Q9H999 370 aa22.5■■□□□ 1.19
RUNX1-209ENST00000460207 C5P01031 1676 aa22.49■■□□□ 1.19
RUNX1-209ENST00000460207 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
RUNX1-209ENST00000460207 EIF4A2Q14240 407 aaKnown RBP22.49■■□□□ 1.19
RUNX1-209ENST00000460207 TAF1LQ8IZX4 1826 aa22.49■■□□□ 1.19
RUNX1-209ENST00000460207 PHKG2P15735 406 aa22.48■■□□□ 1.19
RUNX1-209ENST00000460207 NLGN2Q8NFZ4 835 aa22.48■■□□□ 1.19
RUNX1-209ENST00000460207 TMOD3Q9NYL9 352 aa22.48■■□□□ 1.19
RUNX1-209ENST00000460207 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
RUNX1-209ENST00000460207 GRIN3BO60391 1043 aa22.47■■□□□ 1.19
RUNX1-209ENST00000460207 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
RUNX1-209ENST00000460207 SIK1P57059 783 aa22.47■■□□□ 1.19
RUNX1-209ENST00000460207 AK7Q96M32 723 aa22.47■■□□□ 1.19
RUNX1-209ENST00000460207 CD2APQ9Y5K6 639 aa22.47■■□□□ 1.19
RUNX1-209ENST00000460207 TOGARAM1Q9Y4F4 1720 aa22.46■■□□□ 1.19
RUNX1-209ENST00000460207 MSL1Q68DK7 614 aa22.45■■□□□ 1.18
RUNX1-209ENST00000460207 C4BP0C0L5 1744 aa22.44■■□□□ 1.18
RUNX1-209ENST00000460207 IGSF1Q8N6C5 1336 aa22.44■■□□□ 1.18
RUNX1-209ENST00000460207 ASAP1Q9ULH1 1129 aa22.44■■□□□ 1.18
RUNX1-209ENST00000460207 ERVV-2B6SEH9 535 aa22.43■■□□□ 1.18
RUNX1-209ENST00000460207 SSFA2P28290 1259 aa22.43■■□□□ 1.18
RUNX1-209ENST00000460207 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
RUNX1-209ENST00000460207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.42■■□□□ 1.18
RUNX1-209ENST00000460207 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
RUNX1-209ENST00000460207 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
RUNX1-209ENST00000460207 PLEKHO1Q53GL0 409 aaPredicted RBP22.41■■□□□ 1.18
RUNX1-209ENST00000460207 AMIGO3Q86WK7 504 aa22.41■■□□□ 1.18
RUNX1-209ENST00000460207 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
RUNX1-209ENST00000460207 DCAF5Q96JK2 942 aa22.41■■□□□ 1.18
RUNX1-209ENST00000460207 ATG3Q9NT62 314 aa22.41■■□□□ 1.18
RUNX1-209ENST00000460207 YBX3P16989 372 aaKnown RBP eCLIP22.4■■□□□ 1.18
RUNX1-209ENST00000460207 ATP6V1AP38606 617 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms