RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 BARGINQ6ZT62 677 aa14.2□□□□□ -0.14
HLA-DQB1-207ENST00000460185 CARD14Q9BXL6 1004 aa14.2□□□□□ -0.14
HLA-DQB1-207ENST00000460185 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
HLA-DQB1-207ENST00000460185 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
HLA-DQB1-207ENST00000460185 AMPHP49418 695 aa14.19□□□□□ -0.14
HLA-DQB1-207ENST00000460185 KRT27Q7Z3Y8 459 aa14.19□□□□□ -0.14
HLA-DQB1-207ENST00000460185 PANK3Q9H999 370 aa14.19□□□□□ -0.14
HLA-DQB1-207ENST00000460185 KNSTRNQ9Y448 316 aa14.19□□□□□ -0.14
HLA-DQB1-207ENST00000460185 FLT4P35916 1363 aa14.19□□□□□ -0.14
HLA-DQB1-207ENST00000460185 MAP3K19Q56UN5 1328 aa14.18□□□□□ -0.14
HLA-DQB1-207ENST00000460185 C11orf95C9JLR9 678 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-207ENST00000460185 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-207ENST00000460185 CDCA7Q9BWT1 371 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-207ENST00000460185 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
HLA-DQB1-207ENST00000460185 IP6K1Q92551 441 aa14.17□□□□□ -0.14
HLA-DQB1-207ENST00000460185 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQB1-207ENST00000460185 LHX8Q68G74 356 aa14.16□□□□□ -0.14
HLA-DQB1-207ENST00000460185 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
HLA-DQB1-207ENST00000460185 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
HLA-DQB1-207ENST00000460185 CARD10Q9BWT7 1032 aa14.16□□□□□ -0.14
HLA-DQB1-207ENST00000460185 TNS1Q9HBL0 1735 aaKnown RBP14.15□□□□□ -0.14
HLA-DQB1-207ENST00000460185 HOXC9P31274 260 aa14.15□□□□□ -0.14
HLA-DQB1-207ENST00000460185 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
HLA-DQB1-207ENST00000460185 UPF1Q92900 1129 aaKnown RBP eCLIP14.15□□□□□ -0.14
HLA-DQB1-207ENST00000460185 WASHC2AQ641Q2 1341 aa14.15□□□□□ -0.15
HLA-DQB1-207ENST00000460185 RRS1Q15050 365 aaKnown RBP14.14□□□□□ -0.15
HLA-DQB1-207ENST00000460185 NLRP2Q9NX02 1062 aa14.14□□□□□ -0.15
HLA-DQB1-207ENST00000460185 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
HLA-DQB1-207ENST00000460185 TNS2Q63HR2 1409 aa14.14□□□□□ -0.15
HLA-DQB1-207ENST00000460185 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
HLA-DQB1-207ENST00000460185 INSRP06213 1382 aa14.13□□□□□ -0.15
HLA-DQB1-207ENST00000460185 SF3B2Q13435 895 aaKnown RBP14.13□□□□□ -0.15
HLA-DQB1-207ENST00000460185 CCDC125Q86Z20 511 aa14.13□□□□□ -0.15
HLA-DQB1-207ENST00000460185 DISP2A7MBM2 1401 aa14.13□□□□□ -0.15
HLA-DQB1-207ENST00000460185 DDB1Q16531 1140 aa14.12□□□□□ -0.15
HLA-DQB1-207ENST00000460185 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB1-207ENST00000460185 MORC1Q86VD1 984 aa14.11□□□□□ -0.15
HLA-DQB1-207ENST00000460185 PPM1GO15355 546 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB1-207ENST00000460185 FAM196AQ6ZSG2 479 aa14.1□□□□□ -0.15
HLA-DQB1-207ENST00000460185 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 RGPD3A6NKT7 1758 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 RGPD4Q7Z3J3 1758 aa14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 IL2RBP14784 551 aa14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 FBLN1P23142 703 aa14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 EMILIN1Q9Y6C2 1016 aa14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 SHANK3Q9BYB0 1731 aa14.09□□□□□ -0.15
HLA-DQB1-207ENST00000460185 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
HLA-DQB1-207ENST00000460185 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
HLA-DQB1-207ENST00000460185 KAT6BQ8WYB5 2073 aa14.07□□□□□ -0.16
HLA-DQB1-207ENST00000460185 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-207ENST00000460185 EXOC5O00471 708 aa14.06□□□□□ -0.16
HLA-DQB1-207ENST00000460185 HSP90AB2PQ58FF8 381 aa14.06□□□□□ -0.16
HLA-DQB1-207ENST00000460185 DOT1LQ8TEK3 1739 aa14.06□□□□□ -0.16
HLA-DQB1-207ENST00000460185 BAG6P46379 1132 aa14.05□□□□□ -0.16
HLA-DQB1-207ENST00000460185 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
HLA-DQB1-207ENST00000460185 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
HLA-DQB1-207ENST00000460185 MEGF6O75095 1541 aa14.05□□□□□ -0.16
HLA-DQB1-207ENST00000460185 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-207ENST00000460185 CC2D1BQ5T0F9 858 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-207ENST00000460185 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
HLA-DQB1-207ENST00000460185 BCL9O00512 1426 aa14.04□□□□□ -0.16
HLA-DQB1-207ENST00000460185 RREB1Q92766 1687 aa14.04□□□□□ -0.16
HLA-DQB1-207ENST00000460185 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
HLA-DQB1-207ENST00000460185 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
HLA-DQB1-207ENST00000460185 PLEKHG2Q9H7P9 1386 aa14.03□□□□□ -0.16
HLA-DQB1-207ENST00000460185 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
HLA-DQB1-207ENST00000460185 PARD3Q8TEW0 1356 aa14.02□□□□□ -0.17
HLA-DQB1-207ENST00000460185 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQB1-207ENST00000460185 NBPF6Q5VWK0 638 aa14.02□□□□□ -0.17
HLA-DQB1-207ENST00000460185 NBPF4Q96M43 638 aa14.02□□□□□ -0.17
HLA-DQB1-207ENST00000460185 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQB1-207ENST00000460185 BTAF1O14981 1849 aa14.01□□□□□ -0.17
HLA-DQB1-207ENST00000460185 TRIM37O94972 964 aa14□□□□□ -0.17
HLA-DQB1-207ENST00000460185 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
HLA-DQB1-207ENST00000460185 MARCH10Q8NA82 808 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-207ENST00000460185 NUP188Q5SRE5 1749 aa14□□□□□ -0.17
HLA-DQB1-207ENST00000460185 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
HLA-DQB1-207ENST00000460185 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
HLA-DQB1-207ENST00000460185 EIF4A2Q14240 407 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-207ENST00000460185 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-207ENST00000460185 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-207ENST00000460185 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
HLA-DQB1-207ENST00000460185 ITGB4P16144 1822 aa13.97□□□□□ -0.17
HLA-DQB1-207ENST00000460185 VIRMAQ69YN4 1812 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-207ENST00000460185 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
HLA-DQB1-207ENST00000460185 APBA3O96018 575 aa13.97□□□□□ -0.17
HLA-DQB1-207ENST00000460185 MTHFSP49914 203 aa13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 DEFB132Q7Z7B7 95 aa13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 EYA1Q99502 592 aa13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 BCL11BQ9C0K0 894 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
HLA-DQB1-207ENST00000460185 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
HLA-DQB1-207ENST00000460185 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB1-207ENST00000460185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLA-DQB1-207ENST00000460185 KDRP35968 1356 aa13.94□□□□□ -0.18
HLA-DQB1-207ENST00000460185 LY75O60449 1722 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms