RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 LTV1Q96GA3 475 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-203ENST00000460097 RGPD5Q99666 1765 aa20.31■□□□□ 0.84
CMTM3-203ENST00000460097 SPATA31A1Q5TZJ5 1347 aa20.31■□□□□ 0.84
CMTM3-203ENST00000460097 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
CMTM3-203ENST00000460097 CRB1P82279 1406 aa20.29■□□□□ 0.84
CMTM3-203ENST00000460097 TCP11L2Q8N4U5 519 aa20.28■□□□□ 0.84
CMTM3-203ENST00000460097 CRBNQ96SW2 442 aa20.28■□□□□ 0.84
CMTM3-203ENST00000460097 CARD10Q9BWT7 1032 aa20.28■□□□□ 0.84
CMTM3-203ENST00000460097 MTHFSP49914 203 aa20.27■□□□□ 0.84
CMTM3-203ENST00000460097 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
CMTM3-203ENST00000460097 NLRP2Q9NX02 1062 aa20.27■□□□□ 0.84
CMTM3-203ENST00000460097 THRAP3Q9Y2W1 955 aaKnown RBP20.27■□□□□ 0.84
CMTM3-203ENST00000460097 ONECUT3O60422 494 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-203ENST00000460097 FAM98CQ17RN3 349 aaKnown RBP20.26■□□□□ 0.83
CMTM3-203ENST00000460097 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
CMTM3-203ENST00000460097 GLI3P10071 1580 aa20.26■□□□□ 0.83
CMTM3-203ENST00000460097 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
CMTM3-203ENST00000460097 BARGINQ6ZT62 677 aa20.24■□□□□ 0.83
CMTM3-203ENST00000460097 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
CMTM3-203ENST00000460097 CDK12Q9NYV4 1490 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-203ENST00000460097 A0A0G2JS52 829 aa20.23■□□□□ 0.83
CMTM3-203ENST00000460097 SEPT12Q8IYM1 358 aa20.23■□□□□ 0.83
CMTM3-203ENST00000460097 PPP2R1AP30153 589 aa20.22■□□□□ 0.83
CMTM3-203ENST00000460097 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-203ENST00000460097 DAXXQ9UER7 740 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-203ENST00000460097 NBPF6Q5VWK0 638 aa20.21■□□□□ 0.83
CMTM3-203ENST00000460097 NBPF4Q96M43 638 aa20.21■□□□□ 0.83
CMTM3-203ENST00000460097 EIF4A2Q14240 407 aaKnown RBP20.21■□□□□ 0.83
CMTM3-203ENST00000460097 RGS12O14924 1447 aa20.2■□□□□ 0.82
CMTM3-203ENST00000460097 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
CMTM3-203ENST00000460097 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
CMTM3-203ENST00000460097 CDCA7Q9BWT1 371 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-203ENST00000460097 FAM43AQ8N2R8 423 aa20.17■□□□□ 0.82
CMTM3-203ENST00000460097 FRAT1Q92837 279 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-203ENST00000460097 EYA1Q99502 592 aa20.17■□□□□ 0.82
CMTM3-203ENST00000460097 FAM208AQ9UK61 1670 aaKnown RBP20.17■□□□□ 0.82
CMTM3-203ENST00000460097 IL2RBP14784 551 aa20.16■□□□□ 0.82
CMTM3-203ENST00000460097 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
CMTM3-203ENST00000460097 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
CMTM3-203ENST00000460097 IL13P35225 146 aa20.16■□□□□ 0.82
CMTM3-203ENST00000460097 UBE2Q2Q8WVN8 375 aa20.16■□□□□ 0.82
CMTM3-203ENST00000460097 PLIN1O60240 522 aa20.15■□□□□ 0.82
CMTM3-203ENST00000460097 DIAPH1O60610 1272 aaKnown RBP20.15■□□□□ 0.82
CMTM3-203ENST00000460097 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
CMTM3-203ENST00000460097 BRPF3Q9ULD4 1205 aa20.15■□□□□ 0.82
CMTM3-203ENST00000460097 KRT27Q7Z3Y8 459 aa20.13■□□□□ 0.81
CMTM3-203ENST00000460097 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
CMTM3-203ENST00000460097 RTN4Q9NQC3 1192 aaKnown RBP20.13■□□□□ 0.81
CMTM3-203ENST00000460097 RGPD2P0DJD1 1756 aa20.13■□□□□ 0.81
CMTM3-203ENST00000460097 EXOC5O00471 708 aa20.13■□□□□ 0.81
CMTM3-203ENST00000460097 DDB1Q16531 1140 aa20.13■□□□□ 0.81
CMTM3-203ENST00000460097 RSPH6AQ9H0K4 717 aa20.13■□□□□ 0.81
CMTM3-203ENST00000460097 DISP2A7MBM2 1401 aa20.12■□□□□ 0.81
CMTM3-203ENST00000460097 THSD7AQ9UPZ6 1657 aa20.12■□□□□ 0.81
CMTM3-203ENST00000460097 TRMT2AQ8IZ69 625 aaKnown RBP20.12■□□□□ 0.81
CMTM3-203ENST00000460097 RAPGEF4Q8WZA2 1011 aa20.12■□□□□ 0.81
CMTM3-203ENST00000460097 IGSF1Q8N6C5 1336 aa20.11■□□□□ 0.81
CMTM3-203ENST00000460097 SENP3-EIF4A1A0A087X0R7 540 aa20.11■□□□□ 0.81
CMTM3-203ENST00000460097 TATP17735 454 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-203ENST00000460097 GOLGA2Q08379 1002 aa20.09■□□□□ 0.81
CMTM3-203ENST00000460097 NCAPD2Q15021 1401 aa20.08■□□□□ 0.81
CMTM3-203ENST00000460097 C20orf194Q5TEA3 1177 aa20.08■□□□□ 0.81
CMTM3-203ENST00000460097 SULT6B1Q6IMI4 303 aa20.08■□□□□ 0.81
CMTM3-203ENST00000460097 VIRMAQ69YN4 1812 aaKnown RBP20.08■□□□□ 0.8
CMTM3-203ENST00000460097 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.8
CMTM3-203ENST00000460097 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.8
CMTM3-203ENST00000460097 PARP4Q9UKK3 1724 aaKnown RBP20.07■□□□□ 0.8
CMTM3-203ENST00000460097 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
CMTM3-203ENST00000460097 SLFN5Q08AF3 891 aa20.06■□□□□ 0.8
CMTM3-203ENST00000460097 ZCRB1Q8TBF4 217 aaKnown RBP20.06■□□□□ 0.8
CMTM3-203ENST00000460097 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
CMTM3-203ENST00000460097 MEGF6O75095 1541 aa20.06■□□□□ 0.8
CMTM3-203ENST00000460097 WNK3Q9BYP7 1800 aa20.06■□□□□ 0.8
CMTM3-203ENST00000460097 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
CMTM3-203ENST00000460097 AAMPQ13685 434 aa20.05■□□□□ 0.8
CMTM3-203ENST00000460097 AEBP1Q8IUX7 1158 aa20.05■□□□□ 0.8
CMTM3-203ENST00000460097 HMOX1P09601 288 aa20.04■□□□□ 0.8
CMTM3-203ENST00000460097 MARCH10Q8NA82 808 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-203ENST00000460097 OVOS2A0A0G2JMS6 1433 aa20.04■□□□□ 0.8
CMTM3-203ENST00000460097 DDX54Q8TDD1 881 aaKnown RBP20.03■□□□□ 0.8
CMTM3-203ENST00000460097 EP400Q96L91 3159 aa20.03■□□□□ 0.8
CMTM3-203ENST00000460097 TNS2Q63HR2 1409 aa20.03■□□□□ 0.8
CMTM3-203ENST00000460097 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
CMTM3-203ENST00000460097 LRRC37A3O60309 1634 aa20.03■□□□□ 0.8
CMTM3-203ENST00000460097 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
CMTM3-203ENST00000460097 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
CMTM3-203ENST00000460097 KDRP35968 1356 aa20.02■□□□□ 0.8
CMTM3-203ENST00000460097 RGPD1P0DJD0 1748 aa20.02■□□□□ 0.8
CMTM3-203ENST00000460097 FRAT2O75474 233 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-203ENST00000460097 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-203ENST00000460097 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.8
CMTM3-203ENST00000460097 SPG7Q9UQ90 795 aa20.02■□□□□ 0.8
CMTM3-203ENST00000460097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.01■□□□□ 0.79
CMTM3-203ENST00000460097 PDE3AQ14432 1141 aa20■□□□□ 0.79
CMTM3-203ENST00000460097 BECN1Q14457 450 aa20■□□□□ 0.79
CMTM3-203ENST00000460097 SLC4A3P48751 1232 aa20■□□□□ 0.79
CMTM3-203ENST00000460097 PLEKHO1Q53GL0 409 aaPredicted RBP20■□□□□ 0.79
CMTM3-203ENST00000460097 L1TD1Q5T7N2 865 aaKnown RBP20■□□□□ 0.79
CMTM3-203ENST00000460097 AMOTQ4VCS5 1084 aa19.99■□□□□ 0.79
CMTM3-203ENST00000460097 SKAP1Q86WV1 359 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms