RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SLFN5Q08AF3 891 aa11.55□□□□□ -0.56
RIF1-208ENST00000457745 DUSP27Q5VZP5 1158 aa11.55□□□□□ -0.56
RIF1-208ENST00000457745 TRMT2AQ8IZ69 625 aaKnown RBP11.55□□□□□ -0.56
RIF1-208ENST00000457745 CPDO75976 1380 aa11.54□□□□□ -0.56
RIF1-208ENST00000457745 ANKRD24Q8TF21 1146 aa11.54□□□□□ -0.56
RIF1-208ENST00000457745 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
RIF1-208ENST00000457745 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
RIF1-208ENST00000457745 UBAP1LF5GYI3 381 aa11.53□□□□□ -0.56
RIF1-208ENST00000457745 DCTN1Q14203 1278 aa11.53□□□□□ -0.56
RIF1-208ENST00000457745 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
RIF1-208ENST00000457745 CERKQ8TCT0 537 aa11.53□□□□□ -0.56
RIF1-208ENST00000457745 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
RIF1-208ENST00000457745 ABCC6O95255 1503 aa11.53□□□□□ -0.56
RIF1-208ENST00000457745 MEGF6O75095 1541 aa11.52□□□□□ -0.57
RIF1-208ENST00000457745 RIPK4P57078 832 aa11.52□□□□□ -0.57
RIF1-208ENST00000457745 IRX6P78412 446 aaPredicted RBP11.52□□□□□ -0.57
RIF1-208ENST00000457745 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.57
RIF1-208ENST00000457745 ERBB3P21860 1342 aa11.52□□□□□ -0.57
RIF1-208ENST00000457745 COL5A2P05997 1499 aaPredicted RBP11.51□□□□□ -0.57
RIF1-208ENST00000457745 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
RIF1-208ENST00000457745 CCDC27Q2M243 656 aa11.51□□□□□ -0.57
RIF1-208ENST00000457745 PLCH1Q4KWH8 1693 aa11.51□□□□□ -0.57
RIF1-208ENST00000457745 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
RIF1-208ENST00000457745 NRAPQ86VF7 1730 aa11.51□□□□□ -0.57
RIF1-208ENST00000457745 SHANK3Q9BYB0 1731 aa11.51□□□□□ -0.57
RIF1-208ENST00000457745 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
RIF1-208ENST00000457745 TSR2Q969E8 191 aaKnown RBP11.5□□□□□ -0.57
RIF1-208ENST00000457745 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
RIF1-208ENST00000457745 RNF123Q5XPI4 1314 aa11.49□□□□□ -0.57
RIF1-208ENST00000457745 LRP6O75581 1613 aa11.49□□□□□ -0.57
RIF1-208ENST00000457745 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
RIF1-208ENST00000457745 MCM10Q7L590 875 aa11.48□□□□□ -0.57
RIF1-208ENST00000457745 PRDM11Q9NQV5 511 aa11.48□□□□□ -0.57
RIF1-208ENST00000457745 FANCIQ9NVI1 1328 aa11.48□□□□□ -0.57
RIF1-208ENST00000457745 CRB1P82279 1406 aa11.48□□□□□ -0.57
RIF1-208ENST00000457745 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
RIF1-208ENST00000457745 ADAMTS7Q9UKP4 1686 aa11.47□□□□□ -0.57
RIF1-208ENST00000457745 TOM1O60784 492 aa11.47□□□□□ -0.57
RIF1-208ENST00000457745 ZNF853P0CG23 659 aa11.46□□□□□ -0.57
RIF1-208ENST00000457745 LARP1Q6PKG0 1096 aaKnown RBP11.46□□□□□ -0.57
RIF1-208ENST00000457745 WDR63Q8IWG1 891 aa11.46□□□□□ -0.57
RIF1-208ENST00000457745 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.58
RIF1-208ENST00000457745 E9PSI1 815 aa11.45□□□□□ -0.58
RIF1-208ENST00000457745 KRT24Q2M2I5 525 aa11.45□□□□□ -0.58
RIF1-208ENST00000457745 NLRP2Q9NX02 1062 aa11.45□□□□□ -0.58
RIF1-208ENST00000457745 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
RIF1-208ENST00000457745 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
RIF1-208ENST00000457745 PLIN1O60240 522 aa11.44□□□□□ -0.58
RIF1-208ENST00000457745 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
RIF1-208ENST00000457745 RCAN3Q9UKA8 241 aa11.44□□□□□ -0.58
RIF1-208ENST00000457745 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
RIF1-208ENST00000457745 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
RIF1-208ENST00000457745 ADAMTS2O95450 1211 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 HSPA1LP34931 641 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
RIF1-208ENST00000457745 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
RIF1-208ENST00000457745 PROM2Q8N271 834 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 NGEFQ8N5V2 710 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 TSPYL6Q8N831 410 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 STRN4Q9NRL3 753 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 MIS18AQ9NYP9 233 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 PARP4Q9UKK3 1724 aaKnown RBP11.43□□□□□ -0.58
RIF1-208ENST00000457745 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
RIF1-208ENST00000457745 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
RIF1-208ENST00000457745 KDM3BQ7LBC6 1761 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 BCAR3O75815 825 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 CSB-PGBD3P0DP91 1061 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
RIF1-208ENST00000457745 C20orf194Q5TEA3 1177 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 PNNQ9H307 717 aaKnown RBP11.42□□□□□ -0.58
RIF1-208ENST00000457745 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 BTG4Q9NY30 223 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 OVOS2A0A0G2JMS6 1433 aa11.42□□□□□ -0.58
RIF1-208ENST00000457745 SCN11AQ9UI33 1791 aa11.41□□□□□ -0.58
RIF1-208ENST00000457745 IL16Q14005 1332 aa11.41□□□□□ -0.58
RIF1-208ENST00000457745 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
RIF1-208ENST00000457745 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
RIF1-208ENST00000457745 ZNF530Q6P9A1 599 aaPredicted RBP11.41□□□□□ -0.58
RIF1-208ENST00000457745 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
RIF1-208ENST00000457745 DISP2A7MBM2 1401 aa11.41□□□□□ -0.58
RIF1-208ENST00000457745 SLIT2O94813 1529 aa11.4□□□□□ -0.58
RIF1-208ENST00000457745 CYP27B1O15528 508 aa11.4□□□□□ -0.58
RIF1-208ENST00000457745 C8orf58Q8NAV2 365 aa11.4□□□□□ -0.58
RIF1-208ENST00000457745 BCL2L13Q9BXK5 485 aa11.4□□□□□ -0.58
RIF1-208ENST00000457745 GLI3P10071 1580 aa11.4□□□□□ -0.58
RIF1-208ENST00000457745 CEMIPQ8WUJ3 1361 aa11.4□□□□□ -0.59
RIF1-208ENST00000457745 KCNQ3O43525 872 aa11.39□□□□□ -0.59
RIF1-208ENST00000457745 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
RIF1-208ENST00000457745 GAS2L2Q8NHY3 880 aa11.39□□□□□ -0.59
RIF1-208ENST00000457745 NWD2Q9ULI1 1742 aa11.39□□□□□ -0.59
RIF1-208ENST00000457745 JCADQ9P266 1359 aa11.39□□□□□ -0.59
RIF1-208ENST00000457745 GNAT3A8MTJ3 354 aa11.38□□□□□ -0.59
RIF1-208ENST00000457745 CHL1O00533 1208 aa11.38□□□□□ -0.59
RIF1-208ENST00000457745 TCERG1O14776 1098 aaKnown RBP11.38□□□□□ -0.59
RIF1-208ENST00000457745 RARSP54136 660 aaKnown RBP11.38□□□□□ -0.59
RIF1-208ENST00000457745 TOM1L2Q6ZVM7 507 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms