RNA–Protein interactions for RNA: ENST00000457601.1

SDHAP1-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4

Gene SDHAP1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-208ENST00000457601 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
SDHAP1-208ENST00000457601 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.24
SDHAP1-208ENST00000457601 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
SDHAP1-208ENST00000457601 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
SDHAP1-208ENST00000457601 TCP11L2Q8N4U5 519 aa16.57■□□□□ 0.24
SDHAP1-208ENST00000457601 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
SDHAP1-208ENST00000457601 APAF1O14727 1248 aa16.56■□□□□ 0.24
SDHAP1-208ENST00000457601 TATP17735 454 aaPredicted RBP16.56■□□□□ 0.24
SDHAP1-208ENST00000457601 NEFMP07197 916 aa16.55■□□□□ 0.24
SDHAP1-208ENST00000457601 IL2RBP14784 551 aa16.55■□□□□ 0.24
SDHAP1-208ENST00000457601 HNRNPUQ00839 825 aaKnown RBP eCLIP16.55■□□□□ 0.24
SDHAP1-208ENST00000457601 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
SDHAP1-208ENST00000457601 TRPC5Q9UL62 973 aaPredicted RBP16.55■□□□□ 0.24
SDHAP1-208ENST00000457601 THRAP3Q9Y2W1 955 aaKnown RBP16.55■□□□□ 0.24
SDHAP1-208ENST00000457601 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
SDHAP1-208ENST00000457601 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
SDHAP1-208ENST00000457601 RXRBP28702 533 aa16.54■□□□□ 0.24
SDHAP1-208ENST00000457601 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
SDHAP1-208ENST00000457601 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
SDHAP1-208ENST00000457601 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
SDHAP1-208ENST00000457601 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
SDHAP1-208ENST00000457601 ADAMTS7Q9UKP4 1686 aa16.53■□□□□ 0.24
SDHAP1-208ENST00000457601 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
SDHAP1-208ENST00000457601 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.24
SDHAP1-208ENST00000457601 RGS12O14924 1447 aa16.52■□□□□ 0.23
SDHAP1-208ENST00000457601 AMOTQ4VCS5 1084 aa16.51■□□□□ 0.23
SDHAP1-208ENST00000457601 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
SDHAP1-208ENST00000457601 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
SDHAP1-208ENST00000457601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
SDHAP1-208ENST00000457601 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
SDHAP1-208ENST00000457601 NEUROD2Q15784 382 aa16.5■□□□□ 0.23
SDHAP1-208ENST00000457601 FAM98CQ17RN3 349 aaKnown RBP16.5■□□□□ 0.23
SDHAP1-208ENST00000457601 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
SDHAP1-208ENST00000457601 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
SDHAP1-208ENST00000457601 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
SDHAP1-208ENST00000457601 SPG7Q9UQ90 795 aa16.5■□□□□ 0.23
SDHAP1-208ENST00000457601 SCN11AQ9UI33 1791 aa16.49■□□□□ 0.23
SDHAP1-208ENST00000457601 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
SDHAP1-208ENST00000457601 PCDH11XQ9BZA7 1347 aa16.48■□□□□ 0.23
SDHAP1-208ENST00000457601 PCDH11YQ9BZA8 1340 aa16.48■□□□□ 0.23
SDHAP1-208ENST00000457601 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
SDHAP1-208ENST00000457601 RIPK4P57078 832 aa16.48■□□□□ 0.23
SDHAP1-208ENST00000457601 ZCRB1Q8TBF4 217 aaKnown RBP16.48■□□□□ 0.23
SDHAP1-208ENST00000457601 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
SDHAP1-208ENST00000457601 CYP27B1O15528 508 aa16.47■□□□□ 0.23
SDHAP1-208ENST00000457601 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
SDHAP1-208ENST00000457601 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
SDHAP1-208ENST00000457601 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
SDHAP1-208ENST00000457601 SRCAPQ6ZRS2 3230 aa16.47■□□□□ 0.23
SDHAP1-208ENST00000457601 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
SDHAP1-208ENST00000457601 KDM6AO15550 1401 aaPredicted RBP16.46■□□□□ 0.23
SDHAP1-208ENST00000457601 DOT1LQ8TEK3 1739 aa16.46■□□□□ 0.23
SDHAP1-208ENST00000457601 PHKG2P15735 406 aa16.46■□□□□ 0.23
SDHAP1-208ENST00000457601 CCDC27Q2M243 656 aa16.46■□□□□ 0.23
SDHAP1-208ENST00000457601 AKAP4Q5JQC9 854 aa16.46■□□□□ 0.23
SDHAP1-208ENST00000457601 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
SDHAP1-208ENST00000457601 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.22
SDHAP1-208ENST00000457601 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
SDHAP1-208ENST00000457601 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
SDHAP1-208ENST00000457601 DDB1Q16531 1140 aa16.45■□□□□ 0.22
SDHAP1-208ENST00000457601 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
SDHAP1-208ENST00000457601 MRC1P22897 1456 aa16.45■□□□□ 0.22
SDHAP1-208ENST00000457601 A0A0G2JS52 829 aa16.44■□□□□ 0.22
SDHAP1-208ENST00000457601 EXOC5O00471 708 aa16.44■□□□□ 0.22
SDHAP1-208ENST00000457601 ONECUT3O60422 494 aaPredicted RBP16.44■□□□□ 0.22
SDHAP1-208ENST00000457601 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
SDHAP1-208ENST00000457601 MYT1Q01538 1121 aa16.44■□□□□ 0.22
SDHAP1-208ENST00000457601 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
SDHAP1-208ENST00000457601 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
SDHAP1-208ENST00000457601 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
SDHAP1-208ENST00000457601 CEMIPQ8WUJ3 1361 aa16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 MCM10Q7L590 875 aa16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 SEPT12Q8IYM1 358 aa16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 RTF1Q92541 710 aaKnown RBP16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 EP400Q96L91 3159 aa16.42■□□□□ 0.22
SDHAP1-208ENST00000457601 MPRIPQ6WCQ1 1025 aa16.41■□□□□ 0.22
SDHAP1-208ENST00000457601 ITGB4P16144 1822 aa16.4■□□□□ 0.22
SDHAP1-208ENST00000457601 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
SDHAP1-208ENST00000457601 MARCH10Q8NA82 808 aaPredicted RBP16.4■□□□□ 0.22
SDHAP1-208ENST00000457601 IL17REQ8NFR9 667 aa16.4■□□□□ 0.22
SDHAP1-208ENST00000457601 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
SDHAP1-208ENST00000457601 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
SDHAP1-208ENST00000457601 HSP90AB1P08238 724 aaKnown RBP16.39■□□□□ 0.21
SDHAP1-208ENST00000457601 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
SDHAP1-208ENST00000457601 DCAF5Q96JK2 942 aa16.39■□□□□ 0.21
SDHAP1-208ENST00000457601 LGR6Q9HBX8 967 aa16.39■□□□□ 0.21
SDHAP1-208ENST00000457601 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
SDHAP1-208ENST00000457601 WDR63Q8IWG1 891 aa16.38■□□□□ 0.21
SDHAP1-208ENST00000457601 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
SDHAP1-208ENST00000457601 IL16Q14005 1332 aa16.37■□□□□ 0.21
SDHAP1-208ENST00000457601 SBF2Q86WG5 1849 aa16.36■□□□□ 0.21
SDHAP1-208ENST00000457601 CALD1Q05682 793 aaKnown RBP16.36■□□□□ 0.21
SDHAP1-208ENST00000457601 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
SDHAP1-208ENST00000457601 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
SDHAP1-208ENST00000457601 CDCA7LQ96GN5 454 aa16.35■□□□□ 0.21
SDHAP1-208ENST00000457601 BCL9O00512 1426 aa16.35■□□□□ 0.21
SDHAP1-208ENST00000457601 TEFQ10587 303 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms