RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 ARGLU1Q9NWB6 273 aaPredicted RBP11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 TTC21BQ7Z4L5 1316 aa11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 MBD3O95983 291 aa11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 DDB1Q16531 1140 aa11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 YTHDC2Q9H6S0 1430 aaKnown RBP11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 USP21Q9UK80 565 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 ADGRL2O95490 1459 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 PPP2R1AP30153 589 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 AAMPQ13685 434 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 GCP02774 474 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 ARAP3Q8WWN8 1544 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
MSC-AS1-201ENST00000457356 CCDC66A2RUB6 948 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 PREX2Q70Z35 1606 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 TPM1P09493 284 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 TSPY26PQ9H489 355 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 ARHGEF5Q12774 1597 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 HSP90B2PQ58FF3 399 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 SHROOM2Q13796 1616 aa11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
MSC-AS1-201ENST00000457356 CPLX1O14810 134 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 CCDC73Q6ZRK6 1079 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 PPIP5K1Q6PFW1 1433 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 PDIA4P13667 645 aaKnown RBP11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 GNAI1P63096 354 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 ZSCAN30Q86W11 494 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 C9orf78Q9NZ63 289 aaPredicted RBP11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 TTC21AQ8NDW8 1320 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 EFCAB6Q5THR3 1501 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 PDE3AQ14432 1141 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 C20orf194Q5TEA3 1177 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 IPO7O95373 1038 aaKnown RBP11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 FBLN1P23142 703 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 CLCN1P35523 988 aa11.68□□□□□ -0.54
MSC-AS1-201ENST00000457356 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 MAST1Q9Y2H9 1570 aa11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 VGLL3A8MV65 326 aa11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 CBX1P83916 185 aa11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 TTLL5Q6EMB2 1281 aa11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 ACSBG1Q96GR2 724 aa11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
MSC-AS1-201ENST00000457356 ABCA9Q8IUA7 1624 aa11.66□□□□□ -0.54
MSC-AS1-201ENST00000457356 CPLX2Q6PUV4 134 aaKnown RBP11.66□□□□□ -0.54
MSC-AS1-201ENST00000457356 PDILTQ8N807 584 aa11.66□□□□□ -0.54
MSC-AS1-201ENST00000457356 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
MSC-AS1-201ENST00000457356 ERVK-7P63135 1459 aa11.66□□□□□ -0.54
MSC-AS1-201ENST00000457356 CEBPZQ03701 1054 aaKnown RBP11.65□□□□□ -0.54
MSC-AS1-201ENST00000457356 CCDC70Q6NSX1 233 aa11.65□□□□□ -0.54
MSC-AS1-201ENST00000457356 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
MSC-AS1-201ENST00000457356 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.54
MSC-AS1-201ENST00000457356 RABEP1Q15276 862 aa11.65□□□□□ -0.54
MSC-AS1-201ENST00000457356 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
MSC-AS1-201ENST00000457356 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
MSC-AS1-201ENST00000457356 ERICH4A6NGS2 130 aa11.65□□□□□ -0.55
MSC-AS1-201ENST00000457356 K7ELQ4 463 aaPredicted RBP11.65□□□□□ -0.55
MSC-AS1-201ENST00000457356 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.55
MSC-AS1-201ENST00000457356 H0YHG0 523 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 CCDC112Q8NEF3 446 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 COL17A1Q9UMD9 1497 aaPredicted RBP11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 RNF20Q5VTR2 975 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 PTPRMP28827 1452 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 APPP05067 770 aa11.64□□□□□ -0.55
MSC-AS1-201ENST00000457356 MARCH6O60337 910 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 IGSF3O75054 1194 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 SYCE3A1L190 88 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 NBPF14Q5TI25 921 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 FAM177A1Q8N128 213 aaPredicted RBP11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 QTRT2Q9H974 415 aaKnown RBP11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 TRPM2O94759 1503 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 BTBD11A6QL63 1104 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 STARD3NLO95772 234 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 SYNE3Q6ZMZ3 975 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 ZCRB1Q8TBF4 217 aaKnown RBP11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 TRERF1Q96PN7 1200 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 PZPP20742 1482 aa11.63□□□□□ -0.55
MSC-AS1-201ENST00000457356 KDM4AO75164 1064 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 FILIP1Q7Z7B0 1213 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 IFNL2Q8IZJ0 200 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 METP08581 1390 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 PDCL2Q8N4E4 241 aa11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 NOB1Q9ULX3 412 aaKnown RBP11.62□□□□□ -0.55
MSC-AS1-201ENST00000457356 SMC2O95347 1197 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms