RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
ATXN3-205ENST00000454964 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
ATXN3-205ENST00000454964 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
ATXN3-205ENST00000454964 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
ATXN3-205ENST00000454964 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
ATXN3-205ENST00000454964 KAT6BQ8WYB5 2073 aa12.63□□□□□ -0.39
ATXN3-205ENST00000454964 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
ATXN3-205ENST00000454964 KRT27Q7Z3Y8 459 aa12.63□□□□□ -0.39
ATXN3-205ENST00000454964 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
ATXN3-205ENST00000454964 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
ATXN3-205ENST00000454964 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
ATXN3-205ENST00000454964 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
ATXN3-205ENST00000454964 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
ATXN3-205ENST00000454964 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
ATXN3-205ENST00000454964 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
ATXN3-205ENST00000454964 RGPD2P0DJD1 1756 aa12.61□□□□□ -0.39
ATXN3-205ENST00000454964 GLI3P10071 1580 aa12.61□□□□□ -0.39
ATXN3-205ENST00000454964 KDRP35968 1356 aa12.61□□□□□ -0.39
ATXN3-205ENST00000454964 CCER2I3L3R5 266 aa12.61□□□□□ -0.39
ATXN3-205ENST00000454964 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
ATXN3-205ENST00000454964 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATXN3-205ENST00000454964 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
ATXN3-205ENST00000454964 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
ATXN3-205ENST00000454964 PCDH11XQ9BZA7 1347 aa12.6□□□□□ -0.39
ATXN3-205ENST00000454964 PCDH11YQ9BZA8 1340 aa12.6□□□□□ -0.39
ATXN3-205ENST00000454964 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
ATXN3-205ENST00000454964 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
ATXN3-205ENST00000454964 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
ATXN3-205ENST00000454964 BCL9O00512 1426 aa12.58□□□□□ -0.4
ATXN3-205ENST00000454964 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
ATXN3-205ENST00000454964 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
ATXN3-205ENST00000454964 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
ATXN3-205ENST00000454964 DISP2A7MBM2 1401 aa12.57□□□□□ -0.4
ATXN3-205ENST00000454964 MRS2Q9HD23 443 aa12.57□□□□□ -0.4
ATXN3-205ENST00000454964 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
ATXN3-205ENST00000454964 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
ATXN3-205ENST00000454964 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
ATXN3-205ENST00000454964 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
ATXN3-205ENST00000454964 COL3A1P02461 1466 aaPredicted RBP12.56□□□□□ -0.4
ATXN3-205ENST00000454964 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
ATXN3-205ENST00000454964 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
ATXN3-205ENST00000454964 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
ATXN3-205ENST00000454964 AKAP4Q5JQC9 854 aa12.55□□□□□ -0.4
ATXN3-205ENST00000454964 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
ATXN3-205ENST00000454964 RGS12O14924 1447 aa12.54□□□□□ -0.4
ATXN3-205ENST00000454964 HMOX1P09601 288 aa12.54□□□□□ -0.4
ATXN3-205ENST00000454964 DDX54Q8TDD1 881 aaKnown RBP12.54□□□□□ -0.4
ATXN3-205ENST00000454964 DCAF5Q96JK2 942 aa12.54□□□□□ -0.4
ATXN3-205ENST00000454964 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
ATXN3-205ENST00000454964 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
ATXN3-205ENST00000454964 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
ATXN3-205ENST00000454964 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
ATXN3-205ENST00000454964 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
ATXN3-205ENST00000454964 PKD1L3Q7Z443 1732 aa12.53□□□□□ -0.4
ATXN3-205ENST00000454964 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.41
ATXN3-205ENST00000454964 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
ATXN3-205ENST00000454964 PNISRQ8TF01 805 aaKnown RBP12.52□□□□□ -0.41
ATXN3-205ENST00000454964 PHKG2P15735 406 aa12.51□□□□□ -0.41
ATXN3-205ENST00000454964 MARCH10Q8NA82 808 aaPredicted RBP12.51□□□□□ -0.41
ATXN3-205ENST00000454964 BCL11BQ9C0K0 894 aaPredicted RBP12.51□□□□□ -0.41
ATXN3-205ENST00000454964 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
ATXN3-205ENST00000454964 MEGF6O75095 1541 aa12.51□□□□□ -0.41
ATXN3-205ENST00000454964 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
ATXN3-205ENST00000454964 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
ATXN3-205ENST00000454964 AEBP1Q8IUX7 1158 aa12.5□□□□□ -0.41
ATXN3-205ENST00000454964 SBF2Q86WG5 1849 aa12.49□□□□□ -0.41
ATXN3-205ENST00000454964 MTHFSDQ2M296 383 aaKnown RBP12.49□□□□□ -0.41
ATXN3-205ENST00000454964 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
ATXN3-205ENST00000454964 PLEKHF1Q96S99 279 aa12.49□□□□□ -0.41
ATXN3-205ENST00000454964 EP400Q96L91 3159 aa12.49□□□□□ -0.41
ATXN3-205ENST00000454964 PLSCR1O15162 318 aa12.48□□□□□ -0.41
ATXN3-205ENST00000454964 CYP27B1O15528 508 aa12.48□□□□□ -0.41
ATXN3-205ENST00000454964 BAG6P46379 1132 aa12.48□□□□□ -0.41
ATXN3-205ENST00000454964 NFE2L2Q16236 605 aa12.48□□□□□ -0.41
ATXN3-205ENST00000454964 TEFQ10587 303 aa12.47□□□□□ -0.41
ATXN3-205ENST00000454964 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
ATXN3-205ENST00000454964 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
ATXN3-205ENST00000454964 TMOD3Q9NYL9 352 aa12.47□□□□□ -0.41
ATXN3-205ENST00000454964 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
ATXN3-205ENST00000454964 CABP4P57796 275 aa12.46□□□□□ -0.41
ATXN3-205ENST00000454964 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.42
ATXN3-205ENST00000454964 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.42
ATXN3-205ENST00000454964 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
ATXN3-205ENST00000454964 RIPK4P57078 832 aa12.45□□□□□ -0.42
ATXN3-205ENST00000454964 FAM9BQ8IZU0 186 aa12.45□□□□□ -0.42
ATXN3-205ENST00000454964 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
ATXN3-205ENST00000454964 SOCS7O14512 581 aa12.44□□□□□ -0.42
ATXN3-205ENST00000454964 TRIM37O94972 964 aa12.44□□□□□ -0.42
ATXN3-205ENST00000454964 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
ATXN3-205ENST00000454964 CCDC27Q2M243 656 aa12.44□□□□□ -0.42
ATXN3-205ENST00000454964 ILDR2Q71H61 639 aa12.44□□□□□ -0.42
ATXN3-205ENST00000454964 MIER1Q8N108 512 aa12.44□□□□□ -0.42
ATXN3-205ENST00000454964 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
ATXN3-205ENST00000454964 PHACTR3Q96KR7 559 aa12.44□□□□□ -0.42
ATXN3-205ENST00000454964 ITGB4P16144 1822 aa12.44□□□□□ -0.42
ATXN3-205ENST00000454964 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
ATXN3-205ENST00000454964 RNMTO43148 476 aaKnown RBP12.43□□□□□ -0.42
ATXN3-205ENST00000454964 APBA3O96018 575 aa12.43□□□□□ -0.42
ATXN3-205ENST00000454964 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
ATXN3-205ENST00000454964 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms