RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
SH3BP4-207ENST00000454947 HMOX1P09601 288 aa12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 PRKAR2BP31323 418 aa12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 BARGINQ6ZT62 677 aa12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 FAM9BQ8IZU0 186 aa12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
SH3BP4-207ENST00000454947 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
SH3BP4-207ENST00000454947 FAM98CQ17RN3 349 aaKnown RBP12.45□□□□□ -0.42
SH3BP4-207ENST00000454947 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
SH3BP4-207ENST00000454947 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
SH3BP4-207ENST00000454947 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
SH3BP4-207ENST00000454947 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
SH3BP4-207ENST00000454947 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
SH3BP4-207ENST00000454947 ZNF521Q96K83 1311 aa12.42□□□□□ -0.42
SH3BP4-207ENST00000454947 IL2RBP14784 551 aa12.42□□□□□ -0.42
SH3BP4-207ENST00000454947 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
SH3BP4-207ENST00000454947 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
SH3BP4-207ENST00000454947 SEPT12Q8IYM1 358 aa12.42□□□□□ -0.42
SH3BP4-207ENST00000454947 RGS12O14924 1447 aa12.42□□□□□ -0.42
SH3BP4-207ENST00000454947 MRC1P22897 1456 aa12.41□□□□□ -0.42
SH3BP4-207ENST00000454947 DLG5Q8TDM6 1919 aa12.41□□□□□ -0.42
SH3BP4-207ENST00000454947 TATP17735 454 aaPredicted RBP12.41□□□□□ -0.42
SH3BP4-207ENST00000454947 PDE3BQ13370 1112 aa12.41□□□□□ -0.42
SH3BP4-207ENST00000454947 NFE2L2Q16236 605 aa12.41□□□□□ -0.42
SH3BP4-207ENST00000454947 MTHFSDQ2M296 383 aaKnown RBP12.41□□□□□ -0.42
SH3BP4-207ENST00000454947 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
SH3BP4-207ENST00000454947 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
SH3BP4-207ENST00000454947 APAF1O14727 1248 aa12.4□□□□□ -0.42
SH3BP4-207ENST00000454947 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
SH3BP4-207ENST00000454947 DDB1Q16531 1140 aa12.4□□□□□ -0.42
SH3BP4-207ENST00000454947 GAS2L2Q8NHY3 880 aa12.4□□□□□ -0.42
SH3BP4-207ENST00000454947 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
SH3BP4-207ENST00000454947 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
SH3BP4-207ENST00000454947 BCL9O00512 1426 aa12.39□□□□□ -0.43
SH3BP4-207ENST00000454947 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
SH3BP4-207ENST00000454947 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
SH3BP4-207ENST00000454947 TOGARAM1Q9Y4F4 1720 aa12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 EXOC5O00471 708 aa12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 CYP27B1O15528 508 aa12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 NEFMP07197 916 aa12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 PLEKHO1Q53GL0 409 aaPredicted RBP12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 BRWD3Q6RI45 1802 aa12.38□□□□□ -0.43
SH3BP4-207ENST00000454947 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
SH3BP4-207ENST00000454947 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
SH3BP4-207ENST00000454947 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
SH3BP4-207ENST00000454947 PHKG2P15735 406 aa12.37□□□□□ -0.43
SH3BP4-207ENST00000454947 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
SH3BP4-207ENST00000454947 SIPA1L3O60292 1781 aaPredicted RBP12.37□□□□□ -0.43
SH3BP4-207ENST00000454947 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
SH3BP4-207ENST00000454947 AKAP4Q5JQC9 854 aa12.36□□□□□ -0.43
SH3BP4-207ENST00000454947 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
SH3BP4-207ENST00000454947 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
SH3BP4-207ENST00000454947 HNRNPUQ00839 825 aaKnown RBP eCLIP12.35□□□□□ -0.43
SH3BP4-207ENST00000454947 ZNF530Q6P9A1 599 aaPredicted RBP12.35□□□□□ -0.43
SH3BP4-207ENST00000454947 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
SH3BP4-207ENST00000454947 RRP7AQ9Y3A4 280 aaKnown RBP12.35□□□□□ -0.43
SH3BP4-207ENST00000454947 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
SH3BP4-207ENST00000454947 RIPK4P57078 832 aa12.34□□□□□ -0.43
SH3BP4-207ENST00000454947 LMOD3Q0VAK6 560 aa12.34□□□□□ -0.43
SH3BP4-207ENST00000454947 IFNL2Q8IZJ0 200 aa12.34□□□□□ -0.43
SH3BP4-207ENST00000454947 IL16Q14005 1332 aa12.34□□□□□ -0.43
SH3BP4-207ENST00000454947 PAPPAQ13219 1627 aa12.33□□□□□ -0.43
SH3BP4-207ENST00000454947 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
SH3BP4-207ENST00000454947 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
SH3BP4-207ENST00000454947 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
SH3BP4-207ENST00000454947 HSP90AB1P08238 724 aaKnown RBP12.32□□□□□ -0.44
SH3BP4-207ENST00000454947 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
SH3BP4-207ENST00000454947 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
SH3BP4-207ENST00000454947 WDR63Q8IWG1 891 aa12.32□□□□□ -0.44
SH3BP4-207ENST00000454947 MARCH10Q8NA82 808 aaPredicted RBP12.32□□□□□ -0.44
SH3BP4-207ENST00000454947 DDX54Q8TDD1 881 aaKnown RBP12.32□□□□□ -0.44
SH3BP4-207ENST00000454947 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
SH3BP4-207ENST00000454947 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
SH3BP4-207ENST00000454947 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
SH3BP4-207ENST00000454947 ZNF853P0CG23 659 aa12.31□□□□□ -0.44
SH3BP4-207ENST00000454947 SF3B2Q13435 895 aaKnown RBP12.31□□□□□ -0.44
SH3BP4-207ENST00000454947 NHSQ6T4R5 1651 aa12.31□□□□□ -0.44
SH3BP4-207ENST00000454947 RNMTO43148 476 aaKnown RBP12.3□□□□□ -0.44
SH3BP4-207ENST00000454947 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
SH3BP4-207ENST00000454947 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 DCTN1Q14203 1278 aa12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 MCM10Q7L590 875 aa12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
SH3BP4-207ENST00000454947 ITGB4P16144 1822 aa12.28□□□□□ -0.44
SH3BP4-207ENST00000454947 SENP3-EIF4A1A0A087X0R7 540 aa12.28□□□□□ -0.44
SH3BP4-207ENST00000454947 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
SH3BP4-207ENST00000454947 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
SH3BP4-207ENST00000454947 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
SH3BP4-207ENST00000454947 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
SH3BP4-207ENST00000454947 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
SH3BP4-207ENST00000454947 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms