RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 RAPGEF4Q8WZA2 1011 aa14.89□□□□□ -0.03
TRAF4-206ENST00000454852 PHACTR3Q96KR7 559 aa14.89□□□□□ -0.03
TRAF4-206ENST00000454852 THSD7AQ9UPZ6 1657 aa14.88□□□□□ -0.03
TRAF4-206ENST00000454852 ONECUT3O60422 494 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-206ENST00000454852 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-206ENST00000454852 CCDC146Q8IYE0 955 aa14.88□□□□□ -0.03
TRAF4-206ENST00000454852 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-206ENST00000454852 APAF1O14727 1248 aa14.87□□□□□ -0.03
TRAF4-206ENST00000454852 NFE2L2Q16236 605 aa14.87□□□□□ -0.03
TRAF4-206ENST00000454852 CCDC27Q2M243 656 aa14.87□□□□□ -0.03
TRAF4-206ENST00000454852 PLEKHO1Q53GL0 409 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-206ENST00000454852 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
TRAF4-206ENST00000454852 GJD4Q96KN9 370 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-206ENST00000454852 SHANK3Q9BYB0 1731 aa14.86□□□□□ -0.03
TRAF4-206ENST00000454852 TMPOP42166 694 aaKnown RBP14.86□□□□□ -0.03
TRAF4-206ENST00000454852 MTHFSDQ2M296 383 aaKnown RBP14.86□□□□□ -0.03
TRAF4-206ENST00000454852 ADAMTS7Q9UKP4 1686 aa14.86□□□□□ -0.03
TRAF4-206ENST00000454852 LRRC37A3O60309 1634 aa14.85□□□□□ -0.03
TRAF4-206ENST00000454852 TNS2Q63HR2 1409 aa14.85□□□□□ -0.03
TRAF4-206ENST00000454852 HTATSF1O43719 755 aaKnown RBP14.85□□□□□ -0.03
TRAF4-206ENST00000454852 SPG7Q9UQ90 795 aa14.85□□□□□ -0.03
TRAF4-206ENST00000454852 DLG5Q8TDM6 1919 aa14.84□□□□□ -0.03
TRAF4-206ENST00000454852 QTRT2Q9H974 415 aaKnown RBP14.84□□□□□ -0.03
TRAF4-206ENST00000454852 ZCRB1Q8TBF4 217 aaKnown RBP14.83□□□□□ -0.04
TRAF4-206ENST00000454852 USP35Q9P2H5 1018 aa14.83□□□□□ -0.04
TRAF4-206ENST00000454852 RGS17Q9UGC6 210 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-206ENST00000454852 ZBED9Q6R2W3 1325 aa14.83□□□□□ -0.04
TRAF4-206ENST00000454852 ZNF521Q96K83 1311 aa14.83□□□□□ -0.04
TRAF4-206ENST00000454852 LMOD3Q0VAK6 560 aa14.82□□□□□ -0.04
TRAF4-206ENST00000454852 NKX1-1Q15270 411 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-206ENST00000454852 AKAP4Q5JQC9 854 aa14.82□□□□□ -0.04
TRAF4-206ENST00000454852 CCDC9Q9Y3X0 531 aaKnown RBP14.82□□□□□ -0.04
TRAF4-206ENST00000454852 PCDH11XQ9BZA7 1347 aa14.82□□□□□ -0.04
TRAF4-206ENST00000454852 PCDH11YQ9BZA8 1340 aa14.82□□□□□ -0.04
TRAF4-206ENST00000454852 MAP3K5Q99683 1374 aa14.82□□□□□ -0.04
TRAF4-206ENST00000454852 RIPK4P57078 832 aa14.81□□□□□ -0.04
TRAF4-206ENST00000454852 RBM6P78332 1123 aaKnown RBP14.81□□□□□ -0.04
TRAF4-206ENST00000454852 HNRNPUQ00839 825 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAF4-206ENST00000454852 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
TRAF4-206ENST00000454852 TRIM35Q9UPQ4 493 aa14.81□□□□□ -0.04
TRAF4-206ENST00000454852 GNAT3A8MTJ3 354 aa14.8□□□□□ -0.04
TRAF4-206ENST00000454852 EXOC5O00471 708 aa14.8□□□□□ -0.04
TRAF4-206ENST00000454852 CYP27B1O15528 508 aa14.8□□□□□ -0.04
TRAF4-206ENST00000454852 PHKG2P15735 406 aa14.8□□□□□ -0.04
TRAF4-206ENST00000454852 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-206ENST00000454852 CEMIPQ8WUJ3 1361 aa14.8□□□□□ -0.04
TRAF4-206ENST00000454852 BCL9O00512 1426 aa14.79□□□□□ -0.04
TRAF4-206ENST00000454852 HSP90AB1P08238 724 aaKnown RBP14.79□□□□□ -0.04
TRAF4-206ENST00000454852 DDB1Q16531 1140 aa14.79□□□□□ -0.04
TRAF4-206ENST00000454852 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
TRAF4-206ENST00000454852 WWC1Q8IX03 1113 aa14.79□□□□□ -0.04
TRAF4-206ENST00000454852 SCN11AQ9UI33 1791 aa14.78□□□□□ -0.04
TRAF4-206ENST00000454852 IL16Q14005 1332 aa14.78□□□□□ -0.04
TRAF4-206ENST00000454852 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
TRAF4-206ENST00000454852 WDR63Q8IWG1 891 aa14.78□□□□□ -0.04
TRAF4-206ENST00000454852 RRP7AQ9Y3A4 280 aaKnown RBP14.78□□□□□ -0.04
TRAF4-206ENST00000454852 MRC1P22897 1456 aa14.77□□□□□ -0.04
TRAF4-206ENST00000454852 KDM6AO15550 1401 aaPredicted RBP14.77□□□□□ -0.04
TRAF4-206ENST00000454852 PDE3BQ13370 1112 aa14.77□□□□□ -0.05
TRAF4-206ENST00000454852 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
TRAF4-206ENST00000454852 VIRMAQ69YN4 1812 aaKnown RBP14.76□□□□□ -0.05
TRAF4-206ENST00000454852 CALD1Q05682 793 aaKnown RBP14.76□□□□□ -0.05
TRAF4-206ENST00000454852 IL17REQ8NFR9 667 aa14.76□□□□□ -0.05
TRAF4-206ENST00000454852 SIPA1L3O60292 1781 aaPredicted RBP14.75□□□□□ -0.05
TRAF4-206ENST00000454852 RXRBP28702 533 aa14.75□□□□□ -0.05
TRAF4-206ENST00000454852 NEUROD2Q15784 382 aa14.75□□□□□ -0.05
TRAF4-206ENST00000454852 POTEAQ6S8J7 498 aa14.75□□□□□ -0.05
TRAF4-206ENST00000454852 RTF1Q92541 710 aaKnown RBP14.75□□□□□ -0.05
TRAF4-206ENST00000454852 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
TRAF4-206ENST00000454852 SEPT12Q8IYM1 358 aa14.74□□□□□ -0.05
TRAF4-206ENST00000454852 BABAM1Q9NWV8 329 aa14.74□□□□□ -0.05
TRAF4-206ENST00000454852 TOGARAM1Q9Y4F4 1720 aa14.73□□□□□ -0.05
TRAF4-206ENST00000454852 ERVV-2B6SEH9 535 aa14.73□□□□□ -0.05
TRAF4-206ENST00000454852 MARCH10Q8NA82 808 aaPredicted RBP14.73□□□□□ -0.05
TRAF4-206ENST00000454852 ZNF853P0CG23 659 aa14.72□□□□□ -0.05
TRAF4-206ENST00000454852 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
TRAF4-206ENST00000454852 MPRIPQ6WCQ1 1025 aa14.72□□□□□ -0.05
TRAF4-206ENST00000454852 TRMT2AQ8IZ69 625 aaKnown RBP14.72□□□□□ -0.05
TRAF4-206ENST00000454852 DDX54Q8TDD1 881 aaKnown RBP14.72□□□□□ -0.05
TRAF4-206ENST00000454852 LGR6Q9HBX8 967 aa14.72□□□□□ -0.05
TRAF4-206ENST00000454852 IFT57Q9NWB7 429 aa14.72□□□□□ -0.05
TRAF4-206ENST00000454852 RGS12O14924 1447 aa14.72□□□□□ -0.05
TRAF4-206ENST00000454852 BRWD3Q6RI45 1802 aa14.71□□□□□ -0.05
TRAF4-206ENST00000454852 DCTN1Q14203 1278 aa14.71□□□□□ -0.05
TRAF4-206ENST00000454852 MCM10Q7L590 875 aa14.71□□□□□ -0.05
TRAF4-206ENST00000454852 CFAP44Q96MT7 982 aa14.71□□□□□ -0.05
TRAF4-206ENST00000454852 YTHDC1Q96MU7 727 aaKnown RBP14.71□□□□□ -0.05
TRAF4-206ENST00000454852 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-206ENST00000454852 E9PSI1 815 aa14.7□□□□□ -0.06
TRAF4-206ENST00000454852 CHL1O00533 1208 aa14.7□□□□□ -0.06
TRAF4-206ENST00000454852 GNAI1P63096 354 aa14.7□□□□□ -0.06
TRAF4-206ENST00000454852 SLFN5Q08AF3 891 aa14.7□□□□□ -0.06
TRAF4-206ENST00000454852 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
TRAF4-206ENST00000454852 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
TRAF4-206ENST00000454852 SENP3-EIF4A1A0A087X0R7 540 aa14.69□□□□□ -0.06
TRAF4-206ENST00000454852 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
TRAF4-206ENST00000454852 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
TRAF4-206ENST00000454852 KDM3BQ7LBC6 1761 aa14.69□□□□□ -0.06
TRAF4-206ENST00000454852 ITGB4P16144 1822 aa14.69□□□□□ -0.06
TRAF4-206ENST00000454852 PAPPAQ13219 1627 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms