RNA–Protein interactions for RNA: ENST00000454154.1

ARAFP3-201, Transcript of ARAF pseudogene 3, humanhuman

BASIC

Gene ARAFP3, Length 490 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAFP3-201ENST00000454154 SBF2Q86WG5 1849 aa11.95□□□□□ -0.5
ARAFP3-201ENST00000454154 LRRC37A3O60309 1634 aa11.94□□□□□ -0.5
ARAFP3-201ENST00000454154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
ARAFP3-201ENST00000454154 MEGF6O75095 1541 aa11.94□□□□□ -0.5
ARAFP3-201ENST00000454154 KDRP35968 1356 aa11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 SHANK3Q9BYB0 1731 aa11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 OVOS2A0A0G2JMS6 1433 aa11.93□□□□□ -0.5
ARAFP3-201ENST00000454154 CCDC184Q52MB2 194 aa11.92□□□□□ -0.5
ARAFP3-201ENST00000454154 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
ARAFP3-201ENST00000454154 PKD1L3Q7Z443 1732 aa11.91□□□□□ -0.5
ARAFP3-201ENST00000454154 FCHSD2O94868 740 aa11.91□□□□□ -0.5
ARAFP3-201ENST00000454154 DIEXFQ68CQ4 756 aaKnown RBP11.91□□□□□ -0.5
ARAFP3-201ENST00000454154 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
ARAFP3-201ENST00000454154 CYP27B1O15528 508 aa11.9□□□□□ -0.5
ARAFP3-201ENST00000454154 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
ARAFP3-201ENST00000454154 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
ARAFP3-201ENST00000454154 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
ARAFP3-201ENST00000454154 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
ARAFP3-201ENST00000454154 SOCS7O14512 581 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 PHACTR3Q96KR7 559 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 ADAMTS8Q9UP79 889 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 ITGB4P16144 1822 aa11.88□□□□□ -0.51
ARAFP3-201ENST00000454154 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 BCL9O00512 1426 aa11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 TRIM37O94972 964 aa11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 PHKG2P15735 406 aa11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 ZNF530Q6P9A1 599 aaPredicted RBP11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 PNNQ9H307 717 aaKnown RBP11.87□□□□□ -0.51
ARAFP3-201ENST00000454154 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 KCNQ2O43526 872 aa11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 WDR43Q15061 677 aaKnown RBP eCLIP11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 EP400Q96L91 3159 aa11.86□□□□□ -0.51
ARAFP3-201ENST00000454154 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
ARAFP3-201ENST00000454154 AKAP4Q5JQC9 854 aa11.85□□□□□ -0.51
ARAFP3-201ENST00000454154 C1orf141Q5JVX7 400 aa11.85□□□□□ -0.51
ARAFP3-201ENST00000454154 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
ARAFP3-201ENST00000454154 BCL11BQ9C0K0 894 aaPredicted RBP11.85□□□□□ -0.51
ARAFP3-201ENST00000454154 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
ARAFP3-201ENST00000454154 NEFMP07197 916 aa11.84□□□□□ -0.51
ARAFP3-201ENST00000454154 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
ARAFP3-201ENST00000454154 MIER1Q8N108 512 aa11.84□□□□□ -0.51
ARAFP3-201ENST00000454154 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
ARAFP3-201ENST00000454154 APBA3O96018 575 aa11.83□□□□□ -0.52
ARAFP3-201ENST00000454154 SF3B2Q13435 895 aaKnown RBP11.83□□□□□ -0.52
ARAFP3-201ENST00000454154 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
ARAFP3-201ENST00000454154 DCAF5Q96JK2 942 aa11.83□□□□□ -0.52
ARAFP3-201ENST00000454154 DOT1LQ8TEK3 1739 aa11.83□□□□□ -0.52
ARAFP3-201ENST00000454154 BTAF1O14981 1849 aa11.82□□□□□ -0.52
ARAFP3-201ENST00000454154 GNAT3A8MTJ3 354 aa11.82□□□□□ -0.52
ARAFP3-201ENST00000454154 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
ARAFP3-201ENST00000454154 CCER2I3L3R5 266 aa11.82□□□□□ -0.52
ARAFP3-201ENST00000454154 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
ARAFP3-201ENST00000454154 LGR6Q9HBX8 967 aa11.82□□□□□ -0.52
ARAFP3-201ENST00000454154 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
ARAFP3-201ENST00000454154 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
ARAFP3-201ENST00000454154 TOGARAM1Q9Y4F4 1720 aa11.81□□□□□ -0.52
ARAFP3-201ENST00000454154 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
ARAFP3-201ENST00000454154 DEFB132Q7Z7B7 95 aa11.81□□□□□ -0.52
ARAFP3-201ENST00000454154 CCDC146Q8IYE0 955 aa11.81□□□□□ -0.52
ARAFP3-201ENST00000454154 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
ARAFP3-201ENST00000454154 SYTL4Q96C24 671 aaPredicted RBP11.81□□□□□ -0.52
ARAFP3-201ENST00000454154 PLSCR1O15162 318 aa11.8□□□□□ -0.52
ARAFP3-201ENST00000454154 TMPOP42166 694 aaKnown RBP11.8□□□□□ -0.52
ARAFP3-201ENST00000454154 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
ARAFP3-201ENST00000454154 NFE2L2Q16236 605 aa11.8□□□□□ -0.52
ARAFP3-201ENST00000454154 PIGBQ92521 554 aa11.8□□□□□ -0.52
ARAFP3-201ENST00000454154 MAPK8IP3Q9UPT6 1336 aa11.8□□□□□ -0.52
ARAFP3-201ENST00000454154 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
ARAFP3-201ENST00000454154 BAG6P46379 1132 aa11.79□□□□□ -0.52
ARAFP3-201ENST00000454154 CABP4P57796 275 aa11.79□□□□□ -0.52
ARAFP3-201ENST00000454154 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
ARAFP3-201ENST00000454154 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
ARAFP3-201ENST00000454154 KDM6AO15550 1401 aaPredicted RBP11.78□□□□□ -0.52
ARAFP3-201ENST00000454154 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
ARAFP3-201ENST00000454154 RIPK4P57078 832 aa11.78□□□□□ -0.52
ARAFP3-201ENST00000454154 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
ARAFP3-201ENST00000454154 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
ARAFP3-201ENST00000454154 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
ARAFP3-201ENST00000454154 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
ARAFP3-201ENST00000454154 APAF1O14727 1248 aa11.77□□□□□ -0.53
ARAFP3-201ENST00000454154 DCTN1Q14203 1278 aa11.77□□□□□ -0.53
ARAFP3-201ENST00000454154 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.53
ARAFP3-201ENST00000454154 PROM2Q8N271 834 aa11.77□□□□□ -0.53
ARAFP3-201ENST00000454154 NEUROD2Q15784 382 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms