RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 SYT17Q9BSW7 474 aa16.52■□□□□ 0.24
CHKB-CPT1B-201ENST00000452668 FBLN1P23142 703 aa16.51■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 BTAF1O14981 1849 aa16.5■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 MSH5O43196 834 aa16.49■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 NBPF6Q5VWK0 638 aa16.48■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 NBPF4Q96M43 638 aa16.48■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 MYOM1P52179 1685 aa16.48■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 FLT4P35916 1363 aa16.47■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 GPR162Q16538 588 aa16.46■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 INSRP06213 1382 aa16.46■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 KIF24Q5T7B8 1368 aa16.46■□□□□ 0.23
CHKB-CPT1B-201ENST00000452668 HSP90AB2PQ58FF8 381 aa16.45■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 MEGF6O75095 1541 aa16.45■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 KCNQ4P56696 695 aa16.43■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 PCGF6Q9BYE7 350 aa16.43■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 PAPPAQ13219 1627 aa16.43■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 PNPLA7Q6ZV29 1317 aa16.43■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 MPRIPQ6WCQ1 1025 aa16.41■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 FLAD1Q8NFF5 587 aa16.41■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 SPG7Q9UQ90 795 aa16.41■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 DOT1LQ8TEK3 1739 aa16.41■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
CHKB-CPT1B-201ENST00000452668 KIF20BQ96Q89 1820 aa16.39■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 NSD2O96028 1365 aa16.38■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 ZNF784Q8NCA9 323 aaPredicted RBP16.37■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 AK7Q96M32 723 aa16.37■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 CYP27B1O15528 508 aa16.35■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 QSER1Q2KHR3 1735 aa16.35■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 LY75O60449 1722 aa16.34■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 TMOD3Q9NYL9 352 aa16.34■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.21
CHKB-CPT1B-201ENST00000452668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.25e-8■□□□□ 11
CHKB-CPT1B-201ENST00000452668 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 EYA1Q99502 592 aa16.32■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 POLKQ9UBT6 870 aa16.31■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 PHF14O94880 888 aa16.3■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 PIGBQ92521 554 aa16.3■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 CCER1Q8TC90 406 aaPredicted RBP16.29■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 CD2APQ9Y5K6 639 aa16.29■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 CHD4Q14839 1912 aa16.29■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 SIK1P57059 783 aa16.28■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 C5P01031 1676 aa16.27■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 PHKG2P15735 406 aa16.27■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 ATP6V1AP38606 617 aa16.27■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
CHKB-CPT1B-201ENST00000452668 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 SSFA2P28290 1259 aa16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 PANK3Q9H999 370 aa16.26■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 GNPATO15228 680 aa16.25■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 KNSTRNQ9Y448 316 aa16.25■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 C1QTNF8P60827 252 aa16.24■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 C4BP0C0L5 1744 aa16.23■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 COL24A1Q17RW2 1714 aa16.23■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 ERVV-2B6SEH9 535 aa16.23■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 DCAF5Q96JK2 942 aa16.23■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
CHKB-CPT1B-201ENST00000452668 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms