RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CCDC85AQ96PX6 553 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-202ENST00000452448 ZNF608Q9ULD9 1512 aaPredicted RBP6.07□□□□□ -1.44
EPHA3-202ENST00000452448 TPM3P06753 285 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 TIE1P35590 1138 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 RIPK4P57078 832 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 NAALADL2Q58DX5 795 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 DNAJC21Q5F1R6 531 aaKnown RBP6.07□□□□□ -1.44
EPHA3-202ENST00000452448 LRCH2Q5VUJ6 765 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 RBM46Q8TBY0 533 aaKnown RBP6.07□□□□□ -1.44
EPHA3-202ENST00000452448 PBXIP1Q96AQ6 731 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 NUCKS1Q9H1E3 243 aaKnown RBP6.07□□□□□ -1.44
EPHA3-202ENST00000452448 KAT6BQ8WYB5 2073 aa6.07□□□□□ -1.44
EPHA3-202ENST00000452448 KIF3CO14782 793 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 WDHD1O75717 1129 aaPredicted RBP6.06□□□□□ -1.44
EPHA3-202ENST00000452448 ABCD1P33897 745 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 CD151P48509 253 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 GYS2P54840 703 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 KIAA1211Q6ZU35 1233 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 GAS2L2Q8NHY3 880 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 CCDC102AQ96A19 550 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 GABBR1Q9UBS5 961 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 NRBP1Q9UHY1 535 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 PDZRN3Q9UPQ7 1066 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 POM121CA8CG34 1229 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 HMGB1P1B2RPK0 211 aaPredicted RBP6.06□□□□□ -1.44
EPHA3-202ENST00000452448 TBC1D12O60347 775 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 ZC3H6P61129 1189 aaKnown RBP6.06□□□□□ -1.44
EPHA3-202ENST00000452448 NOM1Q5C9Z4 860 aaKnown RBP6.06□□□□□ -1.44
EPHA3-202ENST00000452448 SMC5Q8IY18 1101 aa6.06□□□□□ -1.44
EPHA3-202ENST00000452448 GABBR2O75899 941 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 PARNO95453 639 aaKnown RBP6.05□□□□□ -1.44
EPHA3-202ENST00000452448 IGHDP01880 384 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 SKILP12757 684 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 L1TD1Q5T7N2 865 aaKnown RBP6.05□□□□□ -1.44
EPHA3-202ENST00000452448 GLMNQ92990 594 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 PRDM2Q13029 1718 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 PPP1R12AO14974 1030 aaPredicted RBP6.05□□□□□ -1.44
EPHA3-202ENST00000452448 TERF1P54274 439 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 HSP90AB2PQ58FF8 381 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 REPIN1Q9BWE0 567 aaKnown RBP6.05□□□□□ -1.44
EPHA3-202ENST00000452448 CDHR5Q9HBB8 845 aa6.05□□□□□ -1.44
EPHA3-202ENST00000452448 SBNO2Q9Y2G9 1366 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 CCDC189A1A4V9 331 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 NAT2P11245 290 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 C11orf96Q7Z7L8 435 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 TTC30AQ86WT1 665 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 GIPC2Q8TF65 315 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 NOL10Q9BSC4 688 aaKnown RBP6.04□□□□□ -1.44
EPHA3-202ENST00000452448 C22orf23Q9BZE7 217 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 BOLA1Q9Y3E2 137 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 ERICH3Q5RHP9 1530 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 TOPBP1Q92547 1522 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 U2AF1L5P0DN76 240 aaPredicted RBP6.04□□□□□ -1.44
EPHA3-202ENST00000452448 COPB2P35606 906 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 FLT3P36888 993 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 TNNT3P45378 269 aaPredicted RBP6.04□□□□□ -1.44
EPHA3-202ENST00000452448 FOXK1P85037 733 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 U2AF1Q01081 240 aaKnown RBP eCLIP6.04□□□□□ -1.44
EPHA3-202ENST00000452448 ASTLQ6HA08 431 aaPredicted RBP6.04□□□□□ -1.44
EPHA3-202ENST00000452448 OGFOD1Q8N543 542 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 JMYQ8N9B5 988 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 KHSRPQ92945 711 aaKnown RBP eCLIP6.04□□□□□ -1.44
EPHA3-202ENST00000452448 BCL2L13Q9BXK5 485 aa6.04□□□□□ -1.44
EPHA3-202ENST00000452448 GNL3LQ9NVN8 582 aaKnown RBP6.04□□□□□ -1.44
EPHA3-202ENST00000452448 SYNRGQ9UMZ2 1314 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 TULP2O00295 520 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 MS4A1P11836 297 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 AMOTL1Q8IY63 956 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 MNS1Q8NEH6 495 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 TIGD1Q96MW7 591 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 PHOX2BQ99453 314 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 SNRKQ9NRH2 765 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 ISY1Q9ULR0 285 aaKnown RBP6.03□□□□□ -1.44
EPHA3-202ENST00000452448 DNMBPQ6XZF7 1577 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 HECW2Q9P2P5 1572 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 CCDC66A2RUB6 948 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 IPO5O00410 1097 aaKnown RBP6.03□□□□□ -1.44
EPHA3-202ENST00000452448 SF3B2Q13435 895 aaKnown RBP6.03□□□□□ -1.44
EPHA3-202ENST00000452448 TTLL12Q14166 644 aaPredicted RBP6.03□□□□□ -1.44
EPHA3-202ENST00000452448 PDIA6Q15084 440 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 AMHR2Q16671 573 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 COMMD10Q9Y6G5 202 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 DDX49Q9Y6V7 483 aaKnown RBP6.03□□□□□ -1.44
EPHA3-202ENST00000452448 ABCC10Q5T3U5 1492 aa6.03□□□□□ -1.44
EPHA3-202ENST00000452448 CFAP69A5D8W1 941 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 POTEJP0CG39 1038 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 LMNB1P20700 586 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 NFKBIBQ15653 356 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 CXorf56Q9H5V9 222 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 RMI1Q9H9A7 625 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 MED4Q9NPJ6 270 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 FBXO9Q9UK97 447 aaPredicted RBP6.02□□□□□ -1.45
EPHA3-202ENST00000452448 KDM6BO15054 1643 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 TOP2BQ02880 1626 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 SYNJ2O15056 1496 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 RAD54L2Q9Y4B4 1467 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 CCDC194A0A1B0GVG4 234 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 NUTM2FA1L443 756 aa6.02□□□□□ -1.45
EPHA3-202ENST00000452448 U2SURPO15042 1029 aaKnown RBP6.02□□□□□ -1.45
EPHA3-202ENST00000452448 ECEL1O95672 775 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms