RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 HMOX1P09601 288 aa15.87■□□□□ 0.13
LINC00339-205ENST00000452322 MYT1Q01538 1121 aa15.87■□□□□ 0.13
LINC00339-205ENST00000452322 TNS2Q63HR2 1409 aa15.87■□□□□ 0.13
LINC00339-205ENST00000452322 CCER2I3L3R5 266 aa15.87■□□□□ 0.13
LINC00339-205ENST00000452322 DDB1Q16531 1140 aa15.87■□□□□ 0.13
LINC00339-205ENST00000452322 PKD1L3Q7Z443 1732 aa15.86■□□□□ 0.13
LINC00339-205ENST00000452322 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
LINC00339-205ENST00000452322 MIER1Q8N108 512 aa15.86■□□□□ 0.13
LINC00339-205ENST00000452322 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
LINC00339-205ENST00000452322 EXOC5O00471 708 aa15.85■□□□□ 0.13
LINC00339-205ENST00000452322 FCHSD2O94868 740 aa15.85■□□□□ 0.13
LINC00339-205ENST00000452322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00339-205ENST00000452322 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
LINC00339-205ENST00000452322 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
LINC00339-205ENST00000452322 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
LINC00339-205ENST00000452322 ZCRB1Q8TBF4 217 aaKnown RBP15.83■□□□□ 0.12
LINC00339-205ENST00000452322 PNISRQ8TF01 805 aaKnown RBP15.83■□□□□ 0.12
LINC00339-205ENST00000452322 PDE3BQ13370 1112 aa15.82■□□□□ 0.12
LINC00339-205ENST00000452322 AMOTQ4VCS5 1084 aa15.82■□□□□ 0.12
LINC00339-205ENST00000452322 PNNQ9H307 717 aaKnown RBP15.82■□□□□ 0.12
LINC00339-205ENST00000452322 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
LINC00339-205ENST00000452322 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
LINC00339-205ENST00000452322 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
LINC00339-205ENST00000452322 PLEKHO1Q53GL0 409 aaPredicted RBP15.81■□□□□ 0.12
LINC00339-205ENST00000452322 KRT27Q7Z3Y8 459 aa15.81■□□□□ 0.12
LINC00339-205ENST00000452322 ADAMTS8Q9UP79 889 aa15.81■□□□□ 0.12
LINC00339-205ENST00000452322 PLEKHF1Q96S99 279 aa15.8■□□□□ 0.12
LINC00339-205ENST00000452322 NEFMP07197 916 aa15.79■□□□□ 0.12
LINC00339-205ENST00000452322 EP400Q96L91 3159 aa15.78■□□□□ 0.12
LINC00339-205ENST00000452322 MARCH10Q8NA82 808 aaPredicted RBP15.78■□□□□ 0.12
LINC00339-205ENST00000452322 MAPK8IP3Q9UPT6 1336 aa15.78■□□□□ 0.12
LINC00339-205ENST00000452322 CYP27B1O15528 508 aa15.77■□□□□ 0.12
LINC00339-205ENST00000452322 MTHFSDQ2M296 383 aaKnown RBP15.77■□□□□ 0.12
LINC00339-205ENST00000452322 GAS2L2Q8NHY3 880 aa15.77■□□□□ 0.12
LINC00339-205ENST00000452322 DDX54Q8TDD1 881 aaKnown RBP15.77■□□□□ 0.12
LINC00339-205ENST00000452322 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.12
LINC00339-205ENST00000452322 BCL9O00512 1426 aa15.77■□□□□ 0.12
LINC00339-205ENST00000452322 PHKG2P15735 406 aa15.76■□□□□ 0.11
LINC00339-205ENST00000452322 ZNF530Q6P9A1 599 aaPredicted RBP15.76■□□□□ 0.11
LINC00339-205ENST00000452322 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
LINC00339-205ENST00000452322 RUNDC1Q96C34 613 aa15.76■□□□□ 0.11
LINC00339-205ENST00000452322 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
LINC00339-205ENST00000452322 AKAP4Q5JQC9 854 aa15.75■□□□□ 0.11
LINC00339-205ENST00000452322 C1orf141Q5JVX7 400 aa15.75■□□□□ 0.11
LINC00339-205ENST00000452322 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
LINC00339-205ENST00000452322 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
LINC00339-205ENST00000452322 PIAS4Q8N2W9 510 aaPredicted RBP15.75■□□□□ 0.11
LINC00339-205ENST00000452322 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
LINC00339-205ENST00000452322 FAM182BQ5T319 152 aa15.74■□□□□ 0.11
LINC00339-205ENST00000452322 FAM196AQ6ZSG2 479 aa15.74■□□□□ 0.11
LINC00339-205ENST00000452322 ILDR2Q71H61 639 aa15.74■□□□□ 0.11
LINC00339-205ENST00000452322 MAP3K5Q99683 1374 aa15.73■□□□□ 0.11
LINC00339-205ENST00000452322 NFE2L2Q16236 605 aa15.72■□□□□ 0.11
LINC00339-205ENST00000452322 DOT1LQ8TEK3 1739 aa15.72■□□□□ 0.11
LINC00339-205ENST00000452322 ADAMTS7Q9UKP4 1686 aa15.71■□□□□ 0.11
LINC00339-205ENST00000452322 TOGARAM1Q9Y4F4 1720 aa15.71■□□□□ 0.11
LINC00339-205ENST00000452322 GNAT3A8MTJ3 354 aa15.71■□□□□ 0.11
LINC00339-205ENST00000452322 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
LINC00339-205ENST00000452322 KDM6AO15550 1401 aaPredicted RBP15.71■□□□□ 0.1
LINC00339-205ENST00000452322 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
LINC00339-205ENST00000452322 TMPOP42166 694 aaKnown RBP15.7■□□□□ 0.1
LINC00339-205ENST00000452322 DLG5Q8TDM6 1919 aa15.7■□□□□ 0.1
LINC00339-205ENST00000452322 NHSQ6T4R5 1651 aa15.7■□□□□ 0.1
LINC00339-205ENST00000452322 SCN11AQ9UI33 1791 aa15.69■□□□□ 0.1
LINC00339-205ENST00000452322 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
LINC00339-205ENST00000452322 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
LINC00339-205ENST00000452322 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
LINC00339-205ENST00000452322 APAF1O14727 1248 aa15.68■□□□□ 0.1
LINC00339-205ENST00000452322 ERVV-2B6SEH9 535 aa15.67■□□□□ 0.1
LINC00339-205ENST00000452322 RNMTO43148 476 aaKnown RBP15.67■□□□□ 0.1
LINC00339-205ENST00000452322 RIPK4P57078 832 aa15.67■□□□□ 0.1
LINC00339-205ENST00000452322 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
LINC00339-205ENST00000452322 RTF1Q92541 710 aaKnown RBP15.67■□□□□ 0.1
LINC00339-205ENST00000452322 ACSBG1Q96GR2 724 aa15.67■□□□□ 0.1
LINC00339-205ENST00000452322 MRC1P22897 1456 aa15.67■□□□□ 0.1
LINC00339-205ENST00000452322 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
LINC00339-205ENST00000452322 RRP7AQ9Y3A4 280 aaKnown RBP15.66■□□□□ 0.1
LINC00339-205ENST00000452322 ITGB4P16144 1822 aa15.66■□□□□ 0.1
LINC00339-205ENST00000452322 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
LINC00339-205ENST00000452322 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
LINC00339-205ENST00000452322 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
LINC00339-205ENST00000452322 BCL11BQ9C0K0 894 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-205ENST00000452322 LGR6Q9HBX8 967 aa15.65■□□□□ 0.1
LINC00339-205ENST00000452322 TNS1Q9HBL0 1735 aaKnown RBP15.65■□□□□ 0.1
LINC00339-205ENST00000452322 KCNQ2O43526 872 aa15.64■□□□□ 0.09
LINC00339-205ENST00000452322 TRIM37O94972 964 aa15.64■□□□□ 0.09
LINC00339-205ENST00000452322 NEUROD2Q15784 382 aa15.64■□□□□ 0.09
LINC00339-205ENST00000452322 SYTL4Q96C24 671 aaPredicted RBP15.64■□□□□ 0.09
LINC00339-205ENST00000452322 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
LINC00339-205ENST00000452322 CABP4P57796 275 aa15.63■□□□□ 0.09
LINC00339-205ENST00000452322 MCM10Q7L590 875 aa15.63■□□□□ 0.09
LINC00339-205ENST00000452322 SLC52A2Q9HAB3 445 aa15.63■□□□□ 0.09
LINC00339-205ENST00000452322 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
LINC00339-205ENST00000452322 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
LINC00339-205ENST00000452322 BTAF1O14981 1849 aa15.63■□□□□ 0.09
LINC00339-205ENST00000452322 DCTN1Q14203 1278 aa15.62■□□□□ 0.09
LINC00339-205ENST00000452322 CCDC125Q86Z20 511 aa15.62■□□□□ 0.09
LINC00339-205ENST00000452322 NGEFQ8N5V2 710 aa15.62■□□□□ 0.09
LINC00339-205ENST00000452322 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
LINC00339-205ENST00000452322 TEFQ10587 303 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms