RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 MEGF6O75095 1541 aa9.36□□□□□ -0.91
PMS1-217ENST00000450931 ADCY9O60503 1353 aa9.36□□□□□ -0.91
PMS1-217ENST00000450931 NSD3Q9BZ95 1437 aa9.36□□□□□ -0.91
PMS1-217ENST00000450931 USP47Q96K76 1375 aa9.35□□□□□ -0.91
PMS1-217ENST00000450931 RGPD2P0DJD1 1756 aa9.35□□□□□ -0.91
PMS1-217ENST00000450931 CICQ96RK0 1608 aaPredicted RBP9.35□□□□□ -0.91
PMS1-217ENST00000450931 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
PMS1-217ENST00000450931 ATP10DQ9P241 1426 aa9.35□□□□□ -0.91
PMS1-217ENST00000450931 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
PMS1-217ENST00000450931 DDX54Q8TDD1 881 aaKnown RBP9.35□□□□□ -0.91
PMS1-217ENST00000450931 CCNL1Q9UK58 526 aaPredicted RBP9.35□□□□□ -0.91
PMS1-217ENST00000450931 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
PMS1-217ENST00000450931 PRIM1P49642 420 aaKnown RBP9.34□□□□□ -0.91
PMS1-217ENST00000450931 KLHL34Q8N239 644 aa9.34□□□□□ -0.91
PMS1-217ENST00000450931 ZCRB1Q8TBF4 217 aaKnown RBP9.34□□□□□ -0.91
PMS1-217ENST00000450931 KIF24Q5T7B8 1368 aa9.34□□□□□ -0.91
PMS1-217ENST00000450931 HOXC9P31274 260 aa9.34□□□□□ -0.91
PMS1-217ENST00000450931 PELP1Q8IZL8 1130 aaKnown RBP9.34□□□□□ -0.91
PMS1-217ENST00000450931 TMC1Q8TDI8 760 aa9.34□□□□□ -0.91
PMS1-217ENST00000450931 PKD1L3Q7Z443 1732 aa9.34□□□□□ -0.91
PMS1-217ENST00000450931 C4BP0C0L5 1744 aa9.33□□□□□ -0.92
PMS1-217ENST00000450931 YBX3P16989 372 aaKnown RBP eCLIP9.33□□□□□ -0.92
PMS1-217ENST00000450931 COG3Q96JB2 828 aa9.33□□□□□ -0.92
PMS1-217ENST00000450931 CARD11Q9BXL7 1154 aa9.33□□□□□ -0.92
PMS1-217ENST00000450931 MAP3K19Q56UN5 1328 aa9.33□□□□□ -0.92
PMS1-217ENST00000450931 SLC12A5Q9H2X9 1139 aa9.33□□□□□ -0.92
PMS1-217ENST00000450931 TOGARAM1Q9Y4F4 1720 aa9.33□□□□□ -0.92
PMS1-217ENST00000450931 COL23A1Q86Y22 540 aaPredicted RBP9.32□□□□□ -0.92
PMS1-217ENST00000450931 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
PMS1-217ENST00000450931 KIF20BQ96Q89 1820 aa9.32□□□□□ -0.92
PMS1-217ENST00000450931 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
PMS1-217ENST00000450931 PCDH11YQ9BZA8 1340 aa9.32□□□□□ -0.92
PMS1-217ENST00000450931 UBR3Q6ZT12 1888 aa9.31□□□□□ -0.92
PMS1-217ENST00000450931 AMPHP49418 695 aa9.31□□□□□ -0.92
PMS1-217ENST00000450931 SIN3AQ96ST3 1273 aa9.31□□□□□ -0.92
PMS1-217ENST00000450931 ITGB4P16144 1822 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 NCAPD2Q15021 1401 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 ANKRD26Q9UPS8 1709 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 INSRP06213 1382 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 PALLDQ8WX93 1383 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 SMARCC1Q92922 1105 aaPredicted RBP9.3□□□□□ -0.92
PMS1-217ENST00000450931 LTV1Q96GA3 475 aaPredicted RBP9.3□□□□□ -0.92
PMS1-217ENST00000450931 PLEKHG2Q9H7P9 1386 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 KIF13BQ9NQT8 1826 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 HSPA6P17066 643 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 RAPGEF4Q8WZA2 1011 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 GPBP1L1Q9HC44 474 aaPredicted RBP9.3□□□□□ -0.92
PMS1-217ENST00000450931 ZNF831Q5JPB2 1677 aa9.3□□□□□ -0.92
PMS1-217ENST00000450931 KAT6BQ8WYB5 2073 aa9.29□□□□□ -0.92
PMS1-217ENST00000450931 MSH5O43196 834 aa9.29□□□□□ -0.92
PMS1-217ENST00000450931 TATP17735 454 aaPredicted RBP9.29□□□□□ -0.92
PMS1-217ENST00000450931 MAP2P11137 1827 aaKnown RBP9.29□□□□□ -0.92
PMS1-217ENST00000450931 KCNQ4P56696 695 aa9.28□□□□□ -0.92
PMS1-217ENST00000450931 NEUROD1Q13562 356 aa9.28□□□□□ -0.92
PMS1-217ENST00000450931 FLT4P35916 1363 aa9.28□□□□□ -0.92
PMS1-217ENST00000450931 TESK2Q96S53 571 aa9.28□□□□□ -0.92
PMS1-217ENST00000450931 KIAA1551Q9HCM1 1747 aa9.28□□□□□ -0.92
PMS1-217ENST00000450931 SSFA2P28290 1259 aa9.27□□□□□ -0.92
PMS1-217ENST00000450931 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.92
PMS1-217ENST00000450931 NBPF4Q96M43 638 aa9.27□□□□□ -0.92
PMS1-217ENST00000450931 AK7Q96M32 723 aa9.27□□□□□ -0.93
PMS1-217ENST00000450931 TONSLQ96HA7 1378 aa9.27□□□□□ -0.93
PMS1-217ENST00000450931 IGSF1Q8N6C5 1336 aa9.26□□□□□ -0.93
PMS1-217ENST00000450931 MSL1Q68DK7 614 aa9.26□□□□□ -0.93
PMS1-217ENST00000450931 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
PMS1-217ENST00000450931 FYB1O15117 783 aa9.24□□□□□ -0.93
PMS1-217ENST00000450931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.935e-7■■■□□ 15.2
PMS1-217ENST00000450931 CYP27B1O15528 508 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 APLP1P51693 650 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
PMS1-217ENST00000450931 PXDNLA1KZ92 1463 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 COL5A3P25940 1745 aaPredicted RBP9.23□□□□□ -0.93
PMS1-217ENST00000450931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
PMS1-217ENST00000450931 KIF3CO14782 793 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 MPRIPQ6WCQ1 1025 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 USHBP1Q8N6Y0 703 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 SPG7Q9UQ90 795 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 C10orf71Q711Q0 1435 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 ST20-MTHFSA0A0A6YYL1 179 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 CDCA8Q53HL2 280 aa9.23□□□□□ -0.93
PMS1-217ENST00000450931 C4AP0C0L4 1744 aa9.22□□□□□ -0.93
PMS1-217ENST00000450931 WDR90Q96KV7 1748 aa9.22□□□□□ -0.93
PMS1-217ENST00000450931 BRCA1P38398 1863 aaKnown RBP9.22□□□□□ -0.93
PMS1-217ENST00000450931 TGFB2P61812 414 aa9.22□□□□□ -0.93
PMS1-217ENST00000450931 TMF1P82094 1093 aa9.22□□□□□ -0.93
PMS1-217ENST00000450931 ARFGEF1Q9Y6D6 1849 aa9.22□□□□□ -0.93
PMS1-217ENST00000450931 KDRP35968 1356 aa9.22□□□□□ -0.93
PMS1-217ENST00000450931 LOC102724428A0A0B4J2F2 783 aa9.21□□□□□ -0.93
PMS1-217ENST00000450931 SIK1P57059 783 aa9.21□□□□□ -0.93
PMS1-217ENST00000450931 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.93
PMS1-217ENST00000450931 PIGBQ92521 554 aa9.21□□□□□ -0.93
PMS1-217ENST00000450931 GGNBP2Q9H3C7 697 aa9.21□□□□□ -0.93
PMS1-217ENST00000450931 TOMM70O94826 608 aa9.21□□□□□ -0.94
PMS1-217ENST00000450931 FBLN1P23142 703 aa9.21□□□□□ -0.94
PMS1-217ENST00000450931 ADRA2BP18089 450 aa9.2□□□□□ -0.94
PMS1-217ENST00000450931 LINC00116Q8NCU8 138 aa9.2□□□□□ -0.94
PMS1-217ENST00000450931 TMOD3Q9NYL9 352 aa9.2□□□□□ -0.94
PMS1-217ENST00000450931 N4BP2Q86UW6 1770 aaPredicted RBP9.2□□□□□ -0.94
PMS1-217ENST00000450931 TNRC6CQ9HCJ0 1690 aaKnown RBP9.2□□□□□ -0.94
PMS1-217ENST00000450931 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms