RNA–Protein interactions for RNA: ENST00000449279.5

SEM1-206, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-206ENST00000449279 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.29
SEM1-206ENST00000449279 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
SEM1-206ENST00000449279 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
SEM1-206ENST00000449279 TNS2Q63HR2 1409 aa13.21□□□□□ -0.3
SEM1-206ENST00000449279 CCER2I3L3R5 266 aa13.2□□□□□ -0.3
SEM1-206ENST00000449279 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
SEM1-206ENST00000449279 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
SEM1-206ENST00000449279 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
SEM1-206ENST00000449279 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
SEM1-206ENST00000449279 BTAF1O14981 1849 aa13.18□□□□□ -0.3
SEM1-206ENST00000449279 IL2RBP14784 551 aa13.18□□□□□ -0.3
SEM1-206ENST00000449279 FAM9BQ8IZU0 186 aa13.18□□□□□ -0.3
SEM1-206ENST00000449279 PHACTR3Q96KR7 559 aa13.18□□□□□ -0.3
SEM1-206ENST00000449279 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
SEM1-206ENST00000449279 NHSQ6T4R5 1651 aa13.18□□□□□ -0.3
SEM1-206ENST00000449279 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
SEM1-206ENST00000449279 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEM1-206ENST00000449279 BARGINQ6ZT62 677 aa13.17□□□□□ -0.3
SEM1-206ENST00000449279 A0A0G2JS52 829 aa13.16□□□□□ -0.3
SEM1-206ENST00000449279 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
SEM1-206ENST00000449279 MYT1Q01538 1121 aa13.16□□□□□ -0.3
SEM1-206ENST00000449279 PLEKHF1Q96S99 279 aa13.16□□□□□ -0.3
SEM1-206ENST00000449279 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
SEM1-206ENST00000449279 RXRBP28702 533 aa13.15□□□□□ -0.3
SEM1-206ENST00000449279 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
SEM1-206ENST00000449279 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
SEM1-206ENST00000449279 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
SEM1-206ENST00000449279 PAPPAQ13219 1627 aa13.14□□□□□ -0.31
SEM1-206ENST00000449279 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
SEM1-206ENST00000449279 KDM3BQ7LBC6 1761 aa13.14□□□□□ -0.31
SEM1-206ENST00000449279 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
SEM1-206ENST00000449279 CYP27B1O15528 508 aa13.13□□□□□ -0.31
SEM1-206ENST00000449279 FCHSD2O94868 740 aa13.13□□□□□ -0.31
SEM1-206ENST00000449279 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
SEM1-206ENST00000449279 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
SEM1-206ENST00000449279 DDB1Q16531 1140 aa13.12□□□□□ -0.31
SEM1-206ENST00000449279 MARCH10Q8NA82 808 aaPredicted RBP13.12□□□□□ -0.31
SEM1-206ENST00000449279 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
SEM1-206ENST00000449279 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
SEM1-206ENST00000449279 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
SEM1-206ENST00000449279 DDX54Q8TDD1 881 aaKnown RBP13.11□□□□□ -0.31
SEM1-206ENST00000449279 C5P01031 1676 aa13.1□□□□□ -0.31
SEM1-206ENST00000449279 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
SEM1-206ENST00000449279 LY75O60449 1722 aa13.1□□□□□ -0.31
SEM1-206ENST00000449279 MRC1P22897 1456 aa13.1□□□□□ -0.31
SEM1-206ENST00000449279 EP400Q96L91 3159 aa13.1□□□□□ -0.31
SEM1-206ENST00000449279 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 TAF1LQ8IZX4 1826 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 EXOC5O00471 708 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 APAF1O14727 1248 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 PHKG2P15735 406 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
SEM1-206ENST00000449279 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
SEM1-206ENST00000449279 PCDH11XQ9BZA7 1347 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 PCDH11YQ9BZA8 1340 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
SEM1-206ENST00000449279 MAP3K5Q99683 1374 aa13.08□□□□□ -0.31
SEM1-206ENST00000449279 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
SEM1-206ENST00000449279 NFE2L2Q16236 605 aa13.08□□□□□ -0.32
SEM1-206ENST00000449279 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
SEM1-206ENST00000449279 DCTN1Q14203 1278 aa13.07□□□□□ -0.32
SEM1-206ENST00000449279 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
SEM1-206ENST00000449279 ILDR2Q71H61 639 aa13.07□□□□□ -0.32
SEM1-206ENST00000449279 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
SEM1-206ENST00000449279 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
SEM1-206ENST00000449279 THUMPD2Q9BTF0 503 aaKnown RBP13.07□□□□□ -0.32
SEM1-206ENST00000449279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.325e-8■□□□□ 10.5
SEM1-206ENST00000449279 TJP1Q07157 1748 aa13.06□□□□□ -0.32
SEM1-206ENST00000449279 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
SEM1-206ENST00000449279 AMOTQ4VCS5 1084 aa13.06□□□□□ -0.32
SEM1-206ENST00000449279 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
SEM1-206ENST00000449279 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
SEM1-206ENST00000449279 SALL2Q9Y467 1007 aaPredicted RBP13.06□□□□□ -0.32
SEM1-206ENST00000449279 MCM10Q7L590 875 aa13.05□□□□□ -0.32
SEM1-206ENST00000449279 IFNL2Q8IZJ0 200 aa13.05□□□□□ -0.32
SEM1-206ENST00000449279 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
SEM1-206ENST00000449279 ACSBG1Q96GR2 724 aa13.05□□□□□ -0.32
SEM1-206ENST00000449279 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
SEM1-206ENST00000449279 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
SEM1-206ENST00000449279 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
SEM1-206ENST00000449279 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 RIPK4P57078 832 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 C1orf141Q5JVX7 400 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 RREB1Q92766 1687 aa13.04□□□□□ -0.32
SEM1-206ENST00000449279 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
SEM1-206ENST00000449279 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
SEM1-206ENST00000449279 KCNQ2O43526 872 aa13.03□□□□□ -0.32
SEM1-206ENST00000449279 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
SEM1-206ENST00000449279 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
SEM1-206ENST00000449279 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.32
SEM1-206ENST00000449279 NEFMP07197 916 aa13.02□□□□□ -0.33
SEM1-206ENST00000449279 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
SEM1-206ENST00000449279 BCL9O00512 1426 aa13.02□□□□□ -0.33
SEM1-206ENST00000449279 KCPQ6ZWJ8 1503 aa13.01□□□□□ -0.33
SEM1-206ENST00000449279 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
SEM1-206ENST00000449279 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 483.3 ms