RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
RFX3-207ENST00000449190 DISP2A7MBM2 1401 aa12.41□□□□□ -0.42
RFX3-207ENST00000449190 APBA3O96018 575 aa12.41□□□□□ -0.42
RFX3-207ENST00000449190 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
RFX3-207ENST00000449190 RTL1A6NKG5 1358 aa12.41□□□□□ -0.42
RFX3-207ENST00000449190 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
RFX3-207ENST00000449190 INSRP06213 1382 aa12.4□□□□□ -0.42
RFX3-207ENST00000449190 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
RFX3-207ENST00000449190 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
RFX3-207ENST00000449190 RALBP1Q15311 655 aa12.39□□□□□ -0.43
RFX3-207ENST00000449190 NBPF6Q5VWK0 638 aa12.39□□□□□ -0.43
RFX3-207ENST00000449190 NBPF4Q96M43 638 aa12.39□□□□□ -0.43
RFX3-207ENST00000449190 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
RFX3-207ENST00000449190 POLKQ9UBT6 870 aa12.39□□□□□ -0.43
RFX3-207ENST00000449190 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
RFX3-207ENST00000449190 BCL9O00512 1426 aa12.38□□□□□ -0.43
RFX3-207ENST00000449190 ANP32CO43423 234 aa12.38□□□□□ -0.43
RFX3-207ENST00000449190 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
RFX3-207ENST00000449190 FLT4P35916 1363 aa12.38□□□□□ -0.43
RFX3-207ENST00000449190 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
RFX3-207ENST00000449190 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
RFX3-207ENST00000449190 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
RFX3-207ENST00000449190 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
RFX3-207ENST00000449190 LTN1O94822 1766 aa12.36□□□□□ -0.43
RFX3-207ENST00000449190 PLSCR1O15162 318 aa12.36□□□□□ -0.43
RFX3-207ENST00000449190 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
RFX3-207ENST00000449190 SMG6Q86US8 1419 aaKnown RBP12.36□□□□□ -0.43
RFX3-207ENST00000449190 RAPGEF4Q8WZA2 1011 aa12.35□□□□□ -0.43
RFX3-207ENST00000449190 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
RFX3-207ENST00000449190 KIF20BQ96Q89 1820 aa12.34□□□□□ -0.43
RFX3-207ENST00000449190 PARD3Q8TEW0 1356 aa12.34□□□□□ -0.43
RFX3-207ENST00000449190 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
RFX3-207ENST00000449190 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
RFX3-207ENST00000449190 MTHFSP49914 203 aa12.34□□□□□ -0.43
RFX3-207ENST00000449190 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
RFX3-207ENST00000449190 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
RFX3-207ENST00000449190 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
RFX3-207ENST00000449190 PPP2R1AP30153 589 aa12.33□□□□□ -0.44
RFX3-207ENST00000449190 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
RFX3-207ENST00000449190 DIEXFQ68CQ4 756 aaKnown RBP12.33□□□□□ -0.44
RFX3-207ENST00000449190 EYA1Q99502 592 aa12.33□□□□□ -0.44
RFX3-207ENST00000449190 PRKRIP1Q9H875 184 aaPredicted RBP12.33□□□□□ -0.44
RFX3-207ENST00000449190 TNS2Q63HR2 1409 aa12.33□□□□□ -0.44
RFX3-207ENST00000449190 RGPD1P0DJD0 1748 aa12.32□□□□□ -0.44
RFX3-207ENST00000449190 KCNQ2O43526 872 aa12.32□□□□□ -0.44
RFX3-207ENST00000449190 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
RFX3-207ENST00000449190 LHX8Q68G74 356 aa12.32□□□□□ -0.44
RFX3-207ENST00000449190 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
RFX3-207ENST00000449190 USHBP1Q8N6Y0 703 aa12.32□□□□□ -0.44
RFX3-207ENST00000449190 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
RFX3-207ENST00000449190 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
RFX3-207ENST00000449190 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
RFX3-207ENST00000449190 GABBR2O75899 941 aa12.3□□□□□ -0.44
RFX3-207ENST00000449190 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
RFX3-207ENST00000449190 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
RFX3-207ENST00000449190 PROM2Q8N271 834 aa12.29□□□□□ -0.44
RFX3-207ENST00000449190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.444e-6■□□□□ 11.2
RFX3-207ENST00000449190 NUDCQ9Y266 331 aa12.29□□□□□ -0.44
RFX3-207ENST00000449190 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
RFX3-207ENST00000449190 DIAPH1O60610 1272 aaKnown RBP12.28□□□□□ -0.44
RFX3-207ENST00000449190 SPG7Q9UQ90 795 aa12.28□□□□□ -0.44
RFX3-207ENST00000449190 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
RFX3-207ENST00000449190 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.44
RFX3-207ENST00000449190 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
RFX3-207ENST00000449190 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
RFX3-207ENST00000449190 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
RFX3-207ENST00000449190 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.45
RFX3-207ENST00000449190 TXNRD1Q16881 649 aa12.27□□□□□ -0.45
RFX3-207ENST00000449190 MEGF6O75095 1541 aa12.27□□□□□ -0.45
RFX3-207ENST00000449190 TNS1Q9HBL0 1735 aaKnown RBP12.26□□□□□ -0.45
RFX3-207ENST00000449190 NKX1-1Q15270 411 aaPredicted RBP12.26□□□□□ -0.45
RFX3-207ENST00000449190 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
RFX3-207ENST00000449190 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
RFX3-207ENST00000449190 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
RFX3-207ENST00000449190 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
RFX3-207ENST00000449190 U2SURPO15042 1029 aaKnown RBP12.25□□□□□ -0.45
RFX3-207ENST00000449190 CYP27B1O15528 508 aa12.25□□□□□ -0.45
RFX3-207ENST00000449190 IL13P35225 146 aa12.25□□□□□ -0.45
RFX3-207ENST00000449190 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
RFX3-207ENST00000449190 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
RFX3-207ENST00000449190 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
RFX3-207ENST00000449190 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
RFX3-207ENST00000449190 SYTL4Q96C24 671 aaPredicted RBP12.24□□□□□ -0.45
RFX3-207ENST00000449190 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
RFX3-207ENST00000449190 PLEKHG2Q9H7P9 1386 aa12.23□□□□□ -0.45
RFX3-207ENST00000449190 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
RFX3-207ENST00000449190 AMOTQ4VCS5 1084 aa12.23□□□□□ -0.45
RFX3-207ENST00000449190 SLC27A3Q5K4L6 730 aa12.23□□□□□ -0.45
RFX3-207ENST00000449190 IFNL2Q8IZJ0 200 aa12.23□□□□□ -0.45
RFX3-207ENST00000449190 U2AF1L5P0DN76 240 aaPredicted RBP12.22□□□□□ -0.45
RFX3-207ENST00000449190 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
RFX3-207ENST00000449190 U2AF1Q01081 240 aaKnown RBP eCLIP12.22□□□□□ -0.45
RFX3-207ENST00000449190 PNNQ9H307 717 aaKnown RBP12.22□□□□□ -0.45
RFX3-207ENST00000449190 STK32BQ9NY57 414 aa12.22□□□□□ -0.45
RFX3-207ENST00000449190 EP400Q96L91 3159 aa12.22□□□□□ -0.45
RFX3-207ENST00000449190 NEFMP07197 916 aa12.21□□□□□ -0.45
RFX3-207ENST00000449190 PHKG2P15735 406 aa12.21□□□□□ -0.45
RFX3-207ENST00000449190 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
RFX3-207ENST00000449190 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.45
RFX3-207ENST00000449190 MRS2Q9HD23 443 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms