RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 PAXIP1Q6ZW49 1069 aaPredicted RBP9.69□□□□□ -0.86
LPP-208ENST00000448637 ABTB2Q8N961 1025 aa9.69□□□□□ -0.86
LPP-208ENST00000448637 FAM177A1Q8N128 213 aaPredicted RBP9.69□□□□□ -0.86
LPP-208ENST00000448637 CCT4P50991 539 aaKnown RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 CHMP4BP1P59074 171 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 C6orf163Q5TEZ5 329 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 CRACR2BQ8N4Y2 399 aaPredicted RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 UPF3BQ9BZI7 483 aaKnown RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 CETN1Q12798 172 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 MICALCLQ6ZW33 695 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 PIBF1Q8WXW3 757 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 LARP1BQ659C4 914 aaKnown RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 LUZP1Q86V48 1076 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 DHX37Q8IY37 1157 aaKnown RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 SREK1Q8WXA9 508 aaKnown RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 NUTM2GQ5VZR2 741 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 CTNNBL1Q8WYA6 563 aaPredicted RBP9.68□□□□□ -0.86
LPP-208ENST00000448637 SRCIN1Q9C0H9 1055 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 LRP2BPQ9P2M1 347 aa9.68□□□□□ -0.86
LPP-208ENST00000448637 STK3Q13188 491 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 DDX12PQ92771 950 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 CEP126Q9P2H0 1117 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 USP47Q96K76 1375 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 ESCO1Q5FWF5 840 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 TMCO3Q6UWJ1 677 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 CACNA2D4Q7Z3S7 1137 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 BLOC1S2Q6QNY1 142 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 PDCL2Q8N4E4 241 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 SPATA32Q96LK8 384 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 MPHOSPH6Q99547 160 aaKnown RBP9.67□□□□□ -0.86
LPP-208ENST00000448637 PPP6R1Q9UPN7 881 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 UBE4AQ14139 1066 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
LPP-208ENST00000448637 TOM1L2Q6ZVM7 507 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 RAB3IL1Q8TBN0 382 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 TMEM266Q2M3C6 531 aa9.67□□□□□ -0.86
LPP-208ENST00000448637 KANK4Q5T7N3 995 aaPredicted RBP9.67□□□□□ -0.86
LPP-208ENST00000448637 ZSCAN12O43309 604 aa9.66□□□□□ -0.86
LPP-208ENST00000448637 SLU7O95391 586 aaKnown RBP9.66□□□□□ -0.86
LPP-208ENST00000448637 BMS1Q14692 1282 aaKnown RBP9.66□□□□□ -0.86
LPP-208ENST00000448637 CCDC178Q5BJE1 867 aa9.66□□□□□ -0.86
LPP-208ENST00000448637 UBXN4Q92575 508 aa9.66□□□□□ -0.86
LPP-208ENST00000448637 FSD2A1L4K1 749 aa9.66□□□□□ -0.86
LPP-208ENST00000448637 MRPS9P82933 396 aaKnown RBP9.66□□□□□ -0.86
LPP-208ENST00000448637 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.66□□□□□ -0.86
LPP-208ENST00000448637 V9GYY5 206 aaPredicted RBP9.66□□□□□ -0.86
LPP-208ENST00000448637 USO1O60763 962 aaKnown RBP9.66□□□□□ -0.86
LPP-208ENST00000448637 ZWINTO95229 277 aa9.66□□□□□ -0.86
LPP-208ENST00000448637 RBM10P98175 930 aaKnown RBP9.66□□□□□ -0.86
LPP-208ENST00000448637 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
LPP-208ENST00000448637 HDGFL1Q5TGJ6 251 aa9.66□□□□□ -0.86
LPP-208ENST00000448637 CCDC175P0C221 793 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 PAFAH1B1P43034 410 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 CCDC83Q8IWF9 413 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 TTC21AQ8NDW8 1320 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 POLR3DP05423 398 aaPredicted RBP9.65□□□□□ -0.86
LPP-208ENST00000448637 WDR78Q5VTH9 848 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 STXBP4Q6ZWJ1 553 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 FAM107BQ9H098 131 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 GOPCQ9HD26 462 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 NUTM2BA6NNL0 878 aaPredicted RBP9.65□□□□□ -0.86
LPP-208ENST00000448637 NUTM2EB1AL46 878 aaPredicted RBP9.65□□□□□ -0.86
LPP-208ENST00000448637 ACTN2P35609 894 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 NUTM2AQ8IVF1 878 aaPredicted RBP9.65□□□□□ -0.86
LPP-208ENST00000448637 SLF2Q8IX21 1173 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 AIDAQ96BJ3 306 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 NUP62CLQ9H1M0 184 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 ZNF652Q9Y2D9 606 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 JPH4Q96JJ6 628 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 PSMD1Q99460 953 aa9.65□□□□□ -0.86
LPP-208ENST00000448637 NAA15Q9BXJ9 866 aaKnown RBP9.65□□□□□ -0.86
LPP-208ENST00000448637 MYCNP04198 464 aaPredicted RBP9.65□□□□□ -0.87
LPP-208ENST00000448637 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.87
LPP-208ENST00000448637 CCDC196A0A1B0GTZ2 297 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 CYB5RLQ6IPT4 315 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 KIF5CO60282 957 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 BAG4O95429 457 aaKnown RBP9.64□□□□□ -0.87
LPP-208ENST00000448637 UQCRHLA0A096LP55 91 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 UQCRHP07919 91 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
LPP-208ENST00000448637 DDX54Q8TDD1 881 aaKnown RBP9.64□□□□□ -0.87
LPP-208ENST00000448637 MACROD2A1Z1Q3 448 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 CFAP100Q494V2 611 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 SPECC1LQ69YQ0 1117 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 UBA5Q9GZZ9 404 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 CAVIN4Q5BKX8 364 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 DDX11Q96FC9 970 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
LPP-208ENST00000448637 PANK1Q8TE04 598 aa9.63□□□□□ -0.87
LPP-208ENST00000448637 GRPEL1Q9HAV7 217 aa9.63□□□□□ -0.87
LPP-208ENST00000448637 BCCIPQ9P287 314 aaKnown RBP eCLIP9.63□□□□□ -0.87
LPP-208ENST00000448637 TDRD9Q8NDG6 1382 aaKnown RBP9.63□□□□□ -0.87
LPP-208ENST00000448637 ATF7IPQ6VMQ6 1270 aa9.63□□□□□ -0.87
LPP-208ENST00000448637 SIL1Q9H173 461 aa9.63□□□□□ -0.87
LPP-208ENST00000448637 IKBKGQ9Y6K9 419 aa9.63□□□□□ -0.87
LPP-208ENST00000448637 CNTLNQ9NXG0 1405 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms