RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 GPKOWQ92917 476 aaPredicted RBP eCLIP5.88□□□□□ -1.476e-8■■■□□ 16.5
PTPN12-208ENST00000447995 BCANQ96GW7 911 aa5.88□□□□□ -1.47
PTPN12-208ENST00000447995 TSEN34Q9BSV6 310 aaKnown RBP5.88□□□□□ -1.47
PTPN12-208ENST00000447995 CARD14Q9BXL6 1004 aa5.88□□□□□ -1.47
PTPN12-208ENST00000447995 EMILIN1Q9Y6C2 1016 aa5.88□□□□□ -1.47
PTPN12-208ENST00000447995 SETD5Q9C0A6 1442 aa5.88□□□□□ -1.47
PTPN12-208ENST00000447995 GRIN2BQ13224 1484 aa5.88□□□□□ -1.47
PTPN12-208ENST00000447995 IFT140Q96RY7 1462 aa5.88□□□□□ -1.47
PTPN12-208ENST00000447995 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
PTPN12-208ENST00000447995 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
PTPN12-208ENST00000447995 ATP1B4Q9UN42 357 aaPredicted RBP5.87□□□□□ -1.47
PTPN12-208ENST00000447995 PHLDB1Q86UU1 1377 aa5.87□□□□□ -1.47
PTPN12-208ENST00000447995 SNAPC4Q5SXM2 1469 aa5.87□□□□□ -1.47
PTPN12-208ENST00000447995 CCDC18Q5T9S5 1454 aa5.87□□□□□ -1.47
PTPN12-208ENST00000447995 ADAMTS12P58397 1594 aa5.87□□□□□ -1.47
PTPN12-208ENST00000447995 PBRM1Q86U86 1689 aa5.86□□□□□ -1.47
PTPN12-208ENST00000447995 WDR62O43379 1518 aa5.86□□□□□ -1.47
PTPN12-208ENST00000447995 MTUS2Q5JR59 1369 aa5.86□□□□□ -1.47
PTPN12-208ENST00000447995 RAB3GAP2Q9H2M9 1393 aa5.86□□□□□ -1.47
PTPN12-208ENST00000447995 TTLL8A6PVC2 850 aa5.86□□□□□ -1.47
PTPN12-208ENST00000447995 KCNMA1Q12791 1236 aa5.86□□□□□ -1.47
PTPN12-208ENST00000447995 CBLBQ13191 982 aa5.86□□□□□ -1.47
PTPN12-208ENST00000447995 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.86□□□□□ -1.47
PTPN12-208ENST00000447995 PPP1R26Q5T8A7 1209 aaPredicted RBP5.86□□□□□ -1.47
PTPN12-208ENST00000447995 GPR161Q8N6U8 529 aaKnown RBP5.86□□□□□ -1.47
PTPN12-208ENST00000447995 IQGAP2Q13576 1575 aa5.85□□□□□ -1.47
PTPN12-208ENST00000447995 EHBP1L1Q8N3D4 1523 aa5.85□□□□□ -1.47
PTPN12-208ENST00000447995 SPINT1O43278 529 aa5.85□□□□□ -1.47
PTPN12-208ENST00000447995 ITGAEP38570 1179 aa5.85□□□□□ -1.47
PTPN12-208ENST00000447995 PTSQ03393 145 aa5.85□□□□□ -1.47
PTPN12-208ENST00000447995 FAM50AQ14320 339 aaKnown RBP5.85□□□□□ -1.47
PTPN12-208ENST00000447995 Q6ZVU0 165 aa5.85□□□□□ -1.47
PTPN12-208ENST00000447995 HECW1Q76N89 1606 aa5.85□□□□□ -1.47
PTPN12-208ENST00000447995 FGD6Q6ZV73 1430 aa5.84□□□□□ -1.47
PTPN12-208ENST00000447995 FBXO31Q5XUX0 539 aaPredicted RBP5.84□□□□□ -1.47
PTPN12-208ENST00000447995 SLC24A3Q9HC58 644 aa5.84□□□□□ -1.47
PTPN12-208ENST00000447995 PGPEP1Q9NXJ5 209 aa5.84□□□□□ -1.47
PTPN12-208ENST00000447995 TIMELESSQ9UNS1 1208 aa5.84□□□□□ -1.47
PTPN12-208ENST00000447995 SUPT6HQ7KZ85 1726 aaKnown RBP5.83□□□□□ -1.48
PTPN12-208ENST00000447995 ACIN1Q9UKV3 1341 aaKnown RBP5.83□□□□□ -1.48
PTPN12-208ENST00000447995 CTDSPL2Q05D32 466 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 INTS6LQ5JSJ4 861 aaKnown RBP5.83□□□□□ -1.48
PTPN12-208ENST00000447995 PDXDC2PQ6P474 469 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 LRRN4Q8WUT4 740 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 SLC10A4Q96EP9 437 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 CNTNAP3BQ96NU0 1288 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 OCSTAMPQ9BR26 566 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 ARHGAP9Q9BRR9 750 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 CNTNAP3Q9BZ76 1288 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 FKBPLQ9UIM3 349 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 UGGT2Q9NYU1 1516 aa5.83□□□□□ -1.48
PTPN12-208ENST00000447995 MYOM3Q5VTT5 1437 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 ZC3H4Q9UPT8 1303 aaKnown RBP5.82□□□□□ -1.48
PTPN12-208ENST00000447995 FIGNL2A6NMB9 653 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 RNFT1Q5M7Z0 435 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 CCDC155Q8N6L0 562 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 NANOS1Q8WY41 292 aaKnown RBP5.82□□□□□ -1.48
PTPN12-208ENST00000447995 KCTD15Q96SI1 283 aaPredicted RBP5.82□□□□□ -1.48
PTPN12-208ENST00000447995 COL25A1Q9BXS0 654 aaPredicted RBP5.82□□□□□ -1.48
PTPN12-208ENST00000447995 POLR3EQ9NVU0 708 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 CDV3Q9UKY7 258 aaKnown RBP5.82□□□□□ -1.48
PTPN12-208ENST00000447995 KIAA0586Q9BVV6 1533 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 ERCC6Q03468 1493 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 NCOA2Q15596 1464 aa5.82□□□□□ -1.48
PTPN12-208ENST00000447995 SLC35F4A4IF30 521 aa5.81□□□□□ -1.48
PTPN12-208ENST00000447995 RSPH6AQ9H0K4 717 aa5.81□□□□□ -1.48
PTPN12-208ENST00000447995 MAGI1Q96QZ7 1491 aaPredicted RBP5.81□□□□□ -1.48
PTPN12-208ENST00000447995 MAPKBP1O60336 1514 aa5.8□□□□□ -1.48
PTPN12-208ENST00000447995 CTSOP43234 321 aaPredicted RBP5.8□□□□□ -1.48
PTPN12-208ENST00000447995 DHX9Q08211 1270 aaKnown RBP5.8□□□□□ -1.48
PTPN12-208ENST00000447995 NR6A1Q15406 480 aa5.8□□□□□ -1.48
PTPN12-208ENST00000447995 ZNF385CQ66K41 422 aaPredicted RBP5.8□□□□□ -1.48
PTPN12-208ENST00000447995 KCTD17Q8N5Z5 321 aa5.8□□□□□ -1.48
PTPN12-208ENST00000447995 AGBL1Q96MI9 1066 aa5.8□□□□□ -1.48
PTPN12-208ENST00000447995 HFM1A2PYH4 1435 aa5.8□□□□□ -1.48
PTPN12-208ENST00000447995 MIA2Q96PC5 1412 aa5.8□□□□□ -1.48
PTPN12-208ENST00000447995 ARHGEF11O15085 1522 aa5.79□□□□□ -1.48
PTPN12-208ENST00000447995 EPRSP07814 1512 aaKnown RBP5.79□□□□□ -1.48
PTPN12-208ENST00000447995 GRIN2AQ12879 1464 aa5.79□□□□□ -1.48
PTPN12-208ENST00000447995 TCOF1Q13428 1488 aaKnown RBP5.79□□□□□ -1.48
PTPN12-208ENST00000447995 ITGA6P23229 1130 aa5.79□□□□□ -1.48
PTPN12-208ENST00000447995 SH3D19Q5HYK7 790 aa5.79□□□□□ -1.48
PTPN12-208ENST00000447995 RNF217Q8TC41 542 aa5.79□□□□□ -1.48
PTPN12-208ENST00000447995 INSM2Q96T92 566 aaPredicted RBP5.79□□□□□ -1.48
PTPN12-208ENST00000447995 ADAMTS8Q9UP79 889 aa5.79□□□□□ -1.48
PTPN12-208ENST00000447995 CDK11AQ9UQ88 783 aaPredicted RBP5.79□□□□□ -1.48
PTPN12-208ENST00000447995 AKNAQ7Z591 1439 aa5.79□□□□□ -1.48
PTPN12-208ENST00000447995 EIF4G3O43432 1585 aaKnown RBP5.79□□□□□ -1.48
PTPN12-208ENST00000447995 ZNF608Q9ULD9 1512 aaPredicted RBP5.79□□□□□ -1.48
PTPN12-208ENST00000447995 KIAA0556O60303 1618 aa5.78□□□□□ -1.48
PTPN12-208ENST00000447995 PTPN23Q9H3S7 1636 aa5.78□□□□□ -1.48
PTPN12-208ENST00000447995 SENP3-EIF4A1A0A087X0R7 540 aa5.78□□□□□ -1.48
PTPN12-208ENST00000447995 RNF225M0QZC1 329 aaPredicted RBP5.78□□□□□ -1.48
PTPN12-208ENST00000447995 RELBQ01201 579 aa5.78□□□□□ -1.48
PTPN12-208ENST00000447995 FOXD4L5Q5VV16 416 aaPredicted RBP5.78□□□□□ -1.48
PTPN12-208ENST00000447995 PPP2R2DQ66LE6 453 aa5.78□□□□□ -1.48
PTPN12-208ENST00000447995 ZBTB33Q86T24 672 aa5.78□□□□□ -1.48
PTPN12-208ENST00000447995 ADAM32Q8TC27 787 aa5.78□□□□□ -1.48
PTPN12-208ENST00000447995 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPN12-208ENST00000447995 UACAQ9BZF9 1416 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms