RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 PROM2Q8N271 834 aa19.25■□□□□ 0.67
SREBF1-207ENST00000447641 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-207ENST00000447641 RGPD2P0DJD1 1756 aa19.24■□□□□ 0.67
SREBF1-207ENST00000447641 CC2D1BQ5T0F9 858 aaKnown RBP19.24■□□□□ 0.67
SREBF1-207ENST00000447641 NLRP2Q9NX02 1062 aa19.24■□□□□ 0.67
SREBF1-207ENST00000447641 LTV1Q96GA3 475 aaPredicted RBP19.23■□□□□ 0.67
SREBF1-207ENST00000447641 CHD4Q14839 1912 aa19.22■□□□□ 0.67
SREBF1-207ENST00000447641 MARCH10Q8NA82 808 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-207ENST00000447641 CDCA7Q9BWT1 371 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-207ENST00000447641 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-207ENST00000447641 PTGER2P43116 358 aa19.21■□□□□ 0.67
SREBF1-207ENST00000447641 DDB1Q16531 1140 aa19.21■□□□□ 0.67
SREBF1-207ENST00000447641 NBPF6Q5VWK0 638 aa19.21■□□□□ 0.67
SREBF1-207ENST00000447641 NBPF4Q96M43 638 aa19.21■□□□□ 0.67
SREBF1-207ENST00000447641 DDX10Q13206 875 aaKnown RBP19.2■□□□□ 0.66
SREBF1-207ENST00000447641 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-207ENST00000447641 BTAF1O14981 1849 aa19.19■□□□□ 0.66
SREBF1-207ENST00000447641 NCAPD2Q15021 1401 aa19.18■□□□□ 0.66
SREBF1-207ENST00000447641 TNS2Q63HR2 1409 aa19.18■□□□□ 0.66
SREBF1-207ENST00000447641 ZBTB7AO95365 584 aa19.18■□□□□ 0.66
SREBF1-207ENST00000447641 TUBGCP6Q96RT7 1819 aa19.17■□□□□ 0.66
SREBF1-207ENST00000447641 IL2RBP14784 551 aa19.17■□□□□ 0.66
SREBF1-207ENST00000447641 MTHFSP49914 203 aa19.17■□□□□ 0.66
SREBF1-207ENST00000447641 EIF4A2Q14240 407 aaKnown RBP19.17■□□□□ 0.66
SREBF1-207ENST00000447641 ZNF316A6NFI3 1004 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-207ENST00000447641 COL24A1Q17RW2 1714 aa19.16■□□□□ 0.66
SREBF1-207ENST00000447641 EYA1Q99502 592 aa19.15■□□□□ 0.66
SREBF1-207ENST00000447641 SGIP1Q9BQI5 828 aa19.15■□□□□ 0.66
SREBF1-207ENST00000447641 QSER1Q2KHR3 1735 aa19.14■□□□□ 0.66
SREBF1-207ENST00000447641 EXOC5O00471 708 aa19.13■□□□□ 0.65
SREBF1-207ENST00000447641 TXNRD1Q16881 649 aa19.13■□□□□ 0.65
SREBF1-207ENST00000447641 IL13P35225 146 aa19.12■□□□□ 0.65
SREBF1-207ENST00000447641 USHBP1Q8N6Y0 703 aa19.12■□□□□ 0.65
SREBF1-207ENST00000447641 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-207ENST00000447641 MEGF6O75095 1541 aa19.11■□□□□ 0.65
SREBF1-207ENST00000447641 IGSF1Q8N6C5 1336 aa19.11■□□□□ 0.65
SREBF1-207ENST00000447641 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
SREBF1-207ENST00000447641 CNGB1Q14028 1251 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-207ENST00000447641 ZNF784Q8NCA9 323 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-207ENST00000447641 SLC15A2Q16348 729 aa19.1■□□□□ 0.65
SREBF1-207ENST00000447641 FHDC1Q9C0D6 1143 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-207ENST00000447641 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-207ENST00000447641 SHANK3Q9BYB0 1731 aa19.08■□□□□ 0.65
SREBF1-207ENST00000447641 SYT17Q9BSW7 474 aa19.08■□□□□ 0.64
SREBF1-207ENST00000447641 CEP350Q5VT06 3117 aa19.08■□□□□ 0.64
SREBF1-207ENST00000447641 RAPGEF4Q8WZA2 1011 aa19.07■□□□□ 0.64
SREBF1-207ENST00000447641 STK32BQ9NY57 414 aa19.07■□□□□ 0.64
SREBF1-207ENST00000447641 PLEKHG2Q9H7P9 1386 aa19.06■□□□□ 0.64
SREBF1-207ENST00000447641 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
SREBF1-207ENST00000447641 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-207ENST00000447641 RALBP1Q15311 655 aa19.06■□□□□ 0.64
SREBF1-207ENST00000447641 ZCRB1Q8TBF4 217 aaKnown RBP19.06■□□□□ 0.64
SREBF1-207ENST00000447641 KDRP35968 1356 aa19.06■□□□□ 0.64
SREBF1-207ENST00000447641 DIAPH1O60610 1272 aaKnown RBP19.05■□□□□ 0.64
SREBF1-207ENST00000447641 MTFR1LQ9H019 292 aa19.05■□□□□ 0.64
SREBF1-207ENST00000447641 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
SREBF1-207ENST00000447641 DOT1LQ8TEK3 1739 aa19.05■□□□□ 0.64
SREBF1-207ENST00000447641 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
SREBF1-207ENST00000447641 LY75O60449 1722 aa19.04■□□□□ 0.64
SREBF1-207ENST00000447641 ZNF827Q17R98 1081 aa19.04■□□□□ 0.64
SREBF1-207ENST00000447641 ACSBG1Q96GR2 724 aa19.04■□□□□ 0.64
SREBF1-207ENST00000447641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.04■□□□□ 0.64
SREBF1-207ENST00000447641 KAT6BQ8WYB5 2073 aa19.03■□□□□ 0.64
SREBF1-207ENST00000447641 AEBP1Q8IUX7 1158 aa19.02■□□□□ 0.64
SREBF1-207ENST00000447641 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
SREBF1-207ENST00000447641 CFAP53Q96M91 514 aa19.01■□□□□ 0.63
SREBF1-207ENST00000447641 LRRC4BQ9NT99 713 aa19.01■□□□□ 0.63
SREBF1-207ENST00000447641 SULT6B1Q6IMI4 303 aa19■□□□□ 0.63
SREBF1-207ENST00000447641 CYP27B1O15528 508 aa18.99■□□□□ 0.63
SREBF1-207ENST00000447641 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-207ENST00000447641 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
SREBF1-207ENST00000447641 PCDH11XQ9BZA7 1347 aa18.99■□□□□ 0.63
SREBF1-207ENST00000447641 PCDH11YQ9BZA8 1340 aa18.99■□□□□ 0.63
SREBF1-207ENST00000447641 NKX1-1Q15270 411 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-207ENST00000447641 ARXQ96QS3 562 aa18.97■□□□□ 0.63
SREBF1-207ENST00000447641 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
SREBF1-207ENST00000447641 AMOTQ4VCS5 1084 aa18.95■□□□□ 0.62
SREBF1-207ENST00000447641 AKT1S1Q96B36 256 aa18.95■□□□□ 0.62
SREBF1-207ENST00000447641 HMOX1P09601 288 aa18.94■□□□□ 0.62
SREBF1-207ENST00000447641 C1QTNF8P60827 252 aa18.94■□□□□ 0.62
SREBF1-207ENST00000447641 PLEKHO1Q53GL0 409 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-207ENST00000447641 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
SREBF1-207ENST00000447641 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
SREBF1-207ENST00000447641 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
SREBF1-207ENST00000447641 PHKG2P15735 406 aa18.93■□□□□ 0.62
SREBF1-207ENST00000447641 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
SREBF1-207ENST00000447641 IFNL2Q8IZJ0 200 aa18.92■□□□□ 0.62
SREBF1-207ENST00000447641 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
SREBF1-207ENST00000447641 PRIM1P49642 420 aaKnown RBP18.9■□□□□ 0.62
SREBF1-207ENST00000447641 TOGARAM1Q9Y4F4 1720 aa18.9■□□□□ 0.62
SREBF1-207ENST00000447641 TAF1LQ8IZX4 1826 aa18.9■□□□□ 0.62
SREBF1-207ENST00000447641 FCHSD2O94868 740 aa18.89■□□□□ 0.61
SREBF1-207ENST00000447641 ZNF530Q6P9A1 599 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-207ENST00000447641 C5P01031 1676 aa18.89■□□□□ 0.61
SREBF1-207ENST00000447641 ITGB4P16144 1822 aa18.88■□□□□ 0.61
SREBF1-207ENST00000447641 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-207ENST00000447641 KCNQ4P56696 695 aa18.88■□□□□ 0.61
SREBF1-207ENST00000447641 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
SREBF1-207ENST00000447641 NLGN2Q8NFZ4 835 aa18.88■□□□□ 0.61
SREBF1-207ENST00000447641 MTHFSDQ2M296 383 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms