RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 PHACTR3Q96KR7 559 aa23.88■■□□□ 1.41
TRAPPC4-203ENST00000447216 PLEKHF1Q96S99 279 aa23.88■■□□□ 1.41
TRAPPC4-203ENST00000447216 OVOS2A0A0G2JMS6 1433 aa23.87■■□□□ 1.41
TRAPPC4-203ENST00000447216 SENP3-EIF4A1A0A087X0R7 540 aa23.87■■□□□ 1.41
TRAPPC4-203ENST00000447216 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
TRAPPC4-203ENST00000447216 THSD7AQ9UPZ6 1657 aa23.86■■□□□ 1.41
TRAPPC4-203ENST00000447216 LRRC37A3O60309 1634 aa23.86■■□□□ 1.41
TRAPPC4-203ENST00000447216 RUNDC1Q96C34 613 aa23.85■■□□□ 1.41
TRAPPC4-203ENST00000447216 PNNQ9H307 717 aaKnown RBP23.85■■□□□ 1.41
TRAPPC4-203ENST00000447216 VIRMAQ69YN4 1812 aaKnown RBP23.84■■□□□ 1.41
TRAPPC4-203ENST00000447216 BRWD3Q6RI45 1802 aa23.84■■□□□ 1.41
TRAPPC4-203ENST00000447216 MAPK8IP3Q9UPT6 1336 aa23.84■■□□□ 1.41
TRAPPC4-203ENST00000447216 A0A0G2JS52 829 aa23.83■■□□□ 1.41
TRAPPC4-203ENST00000447216 RBM6P78332 1123 aaKnown RBP23.83■■□□□ 1.41
TRAPPC4-203ENST00000447216 MYT1Q01538 1121 aa23.83■■□□□ 1.41
TRAPPC4-203ENST00000447216 NEFMP07197 916 aa23.81■■□□□ 1.4
TRAPPC4-203ENST00000447216 MTHFSDQ2M296 383 aaKnown RBP23.81■■□□□ 1.4
TRAPPC4-203ENST00000447216 PLEKHO1Q53GL0 409 aaPredicted RBP23.81■■□□□ 1.4
TRAPPC4-203ENST00000447216 CDCA7Q9BWT1 371 aaPredicted RBP23.81■■□□□ 1.4
TRAPPC4-203ENST00000447216 APAF1O14727 1248 aa23.8■■□□□ 1.4
TRAPPC4-203ENST00000447216 RXRBP28702 533 aa23.8■■□□□ 1.4
TRAPPC4-203ENST00000447216 ZCRB1Q8TBF4 217 aaKnown RBP23.8■■□□□ 1.4
TRAPPC4-203ENST00000447216 RRP7AQ9Y3A4 280 aaKnown RBP23.8■■□□□ 1.4
TRAPPC4-203ENST00000447216 KAT6BQ8WYB5 2073 aa23.8■■□□□ 1.4
TRAPPC4-203ENST00000447216 TNS2Q63HR2 1409 aa23.79■■□□□ 1.4
TRAPPC4-203ENST00000447216 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC4-203ENST00000447216 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
TRAPPC4-203ENST00000447216 DDB1Q16531 1140 aa23.78■■□□□ 1.4
TRAPPC4-203ENST00000447216 AMOTQ4VCS5 1084 aa23.78■■□□□ 1.4
TRAPPC4-203ENST00000447216 SEPT12Q8IYM1 358 aa23.78■■□□□ 1.4
TRAPPC4-203ENST00000447216 EXOC5O00471 708 aa23.77■■□□□ 1.4
TRAPPC4-203ENST00000447216 ONECUT3O60422 494 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC4-203ENST00000447216 NFE2L2Q16236 605 aa23.77■■□□□ 1.4
TRAPPC4-203ENST00000447216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.77■■□□□ 1.4
TRAPPC4-203ENST00000447216 TMPOP42166 694 aaKnown RBP23.76■■□□□ 1.39
TRAPPC4-203ENST00000447216 NEUROD2Q15784 382 aa23.76■■□□□ 1.39
TRAPPC4-203ENST00000447216 GAS2L2Q8NHY3 880 aa23.76■■□□□ 1.39
TRAPPC4-203ENST00000447216 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
TRAPPC4-203ENST00000447216 PLEKHG2Q9H7P9 1386 aa23.76■■□□□ 1.39
TRAPPC4-203ENST00000447216 CYP27B1O15528 508 aa23.75■■□□□ 1.39
TRAPPC4-203ENST00000447216 SALL2Q9Y467 1007 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC4-203ENST00000447216 PCDH11XQ9BZA7 1347 aa23.74■■□□□ 1.39
TRAPPC4-203ENST00000447216 PCDH11YQ9BZA8 1340 aa23.74■■□□□ 1.39
TRAPPC4-203ENST00000447216 RGS12O14924 1447 aa23.74■■□□□ 1.39
TRAPPC4-203ENST00000447216 SCN11AQ9UI33 1791 aa23.73■■□□□ 1.39
TRAPPC4-203ENST00000447216 PHKG2P15735 406 aa23.72■■□□□ 1.39
TRAPPC4-203ENST00000447216 RIPK4P57078 832 aa23.72■■□□□ 1.39
TRAPPC4-203ENST00000447216 C1orf141Q5JVX7 400 aa23.72■■□□□ 1.39
TRAPPC4-203ENST00000447216 MAP3K5Q99683 1374 aa23.71■■□□□ 1.39
TRAPPC4-203ENST00000447216 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
TRAPPC4-203ENST00000447216 MARCH10Q8NA82 808 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC4-203ENST00000447216 PDE3BQ13370 1112 aa23.7■■□□□ 1.38
TRAPPC4-203ENST00000447216 AKAP4Q5JQC9 854 aa23.7■■□□□ 1.38
TRAPPC4-203ENST00000447216 GNAT3A8MTJ3 354 aa23.69■■□□□ 1.38
TRAPPC4-203ENST00000447216 HNRNPUQ00839 825 aaKnown RBP eCLIP23.69■■□□□ 1.38
TRAPPC4-203ENST00000447216 TOGARAM1Q9Y4F4 1720 aa23.69■■□□□ 1.38
TRAPPC4-203ENST00000447216 DCTN1Q14203 1278 aa23.68■■□□□ 1.38
TRAPPC4-203ENST00000447216 MPRIPQ6WCQ1 1025 aa23.68■■□□□ 1.38
TRAPPC4-203ENST00000447216 YTHDC1Q96MU7 727 aaKnown RBP23.68■■□□□ 1.38
TRAPPC4-203ENST00000447216 DOT1LQ8TEK3 1739 aa23.67■■□□□ 1.38
TRAPPC4-203ENST00000447216 FAM182BQ5T319 152 aa23.67■■□□□ 1.38
TRAPPC4-203ENST00000447216 TRIM35Q9UPQ4 493 aa23.67■■□□□ 1.38
TRAPPC4-203ENST00000447216 ITGB4P16144 1822 aa23.67■■□□□ 1.38
TRAPPC4-203ENST00000447216 KDM6AO15550 1401 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC4-203ENST00000447216 ADAMTS7Q9UKP4 1686 aa23.67■■□□□ 1.38
TRAPPC4-203ENST00000447216 MCM10Q7L590 875 aa23.66■■□□□ 1.38
TRAPPC4-203ENST00000447216 SBF2Q86WG5 1849 aa23.66■■□□□ 1.38
TRAPPC4-203ENST00000447216 KRT27Q7Z3Y8 459 aa23.65■■□□□ 1.38
TRAPPC4-203ENST00000447216 THUMPD2Q9BTF0 503 aaKnown RBP23.65■■□□□ 1.38
TRAPPC4-203ENST00000447216 LGR6Q9HBX8 967 aa23.65■■□□□ 1.38
TRAPPC4-203ENST00000447216 IL17REQ8NFR9 667 aa23.64■■□□□ 1.37
TRAPPC4-203ENST00000447216 RTF1Q92541 710 aaKnown RBP23.64■■□□□ 1.37
TRAPPC4-203ENST00000447216 RNMTO43148 476 aaKnown RBP23.63■■□□□ 1.37
TRAPPC4-203ENST00000447216 NKX1-1Q15270 411 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC4-203ENST00000447216 SIPA1L3O60292 1781 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC4-203ENST00000447216 HSP90AB1P08238 724 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-203ENST00000447216 LMOD3Q0VAK6 560 aa23.62■■□□□ 1.37
TRAPPC4-203ENST00000447216 HTATSF1O43719 755 aaKnown RBP23.61■■□□□ 1.37
TRAPPC4-203ENST00000447216 DCAF5Q96JK2 942 aa23.61■■□□□ 1.37
TRAPPC4-203ENST00000447216 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
TRAPPC4-203ENST00000447216 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
TRAPPC4-203ENST00000447216 ACSBG1Q96GR2 724 aa23.59■■□□□ 1.37
TRAPPC4-203ENST00000447216 CEMIPQ8WUJ3 1361 aa23.58■■□□□ 1.37
TRAPPC4-203ENST00000447216 NCBP3Q53F19 620 aaKnown RBP23.57■■□□□ 1.36
TRAPPC4-203ENST00000447216 NGEFQ8N5V2 710 aa23.57■■□□□ 1.36
TRAPPC4-203ENST00000447216 NHSQ6T4R5 1651 aa23.56■■□□□ 1.36
TRAPPC4-203ENST00000447216 ZNF521Q96K83 1311 aa23.56■■□□□ 1.36
TRAPPC4-203ENST00000447216 MRC1P22897 1456 aa23.56■■□□□ 1.36
TRAPPC4-203ENST00000447216 TEFQ10587 303 aa23.55■■□□□ 1.36
TRAPPC4-203ENST00000447216 PRIM1P49642 420 aaKnown RBP23.54■■□□□ 1.36
TRAPPC4-203ENST00000447216 CABP4P57796 275 aa23.54■■□□□ 1.36
TRAPPC4-203ENST00000447216 SYTL4Q96C24 671 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC4-203ENST00000447216 BCL9O00512 1426 aa23.53■■□□□ 1.36
TRAPPC4-203ENST00000447216 ERVV-2B6SEH9 535 aa23.53■■□□□ 1.36
TRAPPC4-203ENST00000447216 KCNQ2O43526 872 aa23.53■■□□□ 1.36
TRAPPC4-203ENST00000447216 NFATC2IPQ8NCF5 419 aa23.53■■□□□ 1.36
TRAPPC4-203ENST00000447216 SLC52A2Q9HAB3 445 aa23.53■■□□□ 1.36
TRAPPC4-203ENST00000447216 BTAF1O14981 1849 aa23.53■■□□□ 1.36
TRAPPC4-203ENST00000447216 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
TRAPPC4-203ENST00000447216 FAM196AQ6ZSG2 479 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms