RNA–Protein interactions for RNA: ENST00000445506.6

MSR1-205, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 1,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-205ENST00000445506 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
MSR1-205ENST00000445506 LRRC37A3O60309 1634 aa16.03■□□□□ 0.16
MSR1-205ENST00000445506 SOX12O15370 315 aa16.02■□□□□ 0.15
MSR1-205ENST00000445506 IGHDP01880 384 aa16.02■□□□□ 0.15
MSR1-205ENST00000445506 ILDR2Q71H61 639 aa16.02■□□□□ 0.15
MSR1-205ENST00000445506 MTHFSDQ2M296 383 aaKnown RBP16.01■□□□□ 0.15
MSR1-205ENST00000445506 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
MSR1-205ENST00000445506 NCAPD2Q15021 1401 aa16.01■□□□□ 0.15
MSR1-205ENST00000445506 FAM83GA6ND36 823 aa16■□□□□ 0.15
MSR1-205ENST00000445506 PIP4K2BP78356 416 aa16■□□□□ 0.15
MSR1-205ENST00000445506 HDAC1Q13547 482 aaPredicted RBP16■□□□□ 0.15
MSR1-205ENST00000445506 ORAI2Q96SN7 254 aa16■□□□□ 0.15
MSR1-205ENST00000445506 ALS2Q96Q42 1657 aa16■□□□□ 0.15
MSR1-205ENST00000445506 ATF3P18847 181 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 KRT28Q7Z3Y7 464 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 CADPS2Q86UW7 1296 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 TNNQ9UQP3 1299 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 STRCP1A6NGW2 1772 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 TMEM94Q12767 1356 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 ARHGEF25Q86VW2 580 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
MSR1-205ENST00000445506 CAMTA1Q9Y6Y1 1673 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 ABCC6O95255 1503 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 ABCC4O15439 1325 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 GNAT3A8MTJ3 354 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 GCP02774 474 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 DCTN1Q14203 1278 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 TMEM57Q8N5G2 664 aa15.98■□□□□ 0.15
MSR1-205ENST00000445506 RBM33Q96EV2 1170 aaKnown RBP15.98■□□□□ 0.15
MSR1-205ENST00000445506 MAP3K5Q99683 1374 aa15.97■□□□□ 0.15
MSR1-205ENST00000445506 FOXO3O43524 673 aa15.97■□□□□ 0.15
MSR1-205ENST00000445506 ANP32AP39687 249 aaKnown RBP15.97■□□□□ 0.15
MSR1-205ENST00000445506 FAM161AQ3B820 660 aa15.97■□□□□ 0.15
MSR1-205ENST00000445506 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
MSR1-205ENST00000445506 PTPRCP08575 1304 aa15.96■□□□□ 0.15
MSR1-205ENST00000445506 MCM10Q7L590 875 aa15.96■□□□□ 0.15
MSR1-205ENST00000445506 HSPA1LP34931 641 aa15.95■□□□□ 0.14
MSR1-205ENST00000445506 CHMP4AQ9BY43 222 aa15.95■□□□□ 0.14
MSR1-205ENST00000445506 MSH6P52701 1360 aa15.95■□□□□ 0.14
MSR1-205ENST00000445506 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
MSR1-205ENST00000445506 AMOTQ4VCS5 1084 aa15.94■□□□□ 0.14
MSR1-205ENST00000445506 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
MSR1-205ENST00000445506 ZBTB7BO15156 539 aaPredicted RBP15.93■□□□□ 0.14
MSR1-205ENST00000445506 SMC5Q8IY18 1101 aa15.93■□□□□ 0.14
MSR1-205ENST00000445506 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
MSR1-205ENST00000445506 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
MSR1-205ENST00000445506 CACNA1FO60840 1977 aa15.92■□□□□ 0.14
MSR1-205ENST00000445506 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
MSR1-205ENST00000445506 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
MSR1-205ENST00000445506 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
MSR1-205ENST00000445506 CEMIPQ8WUJ3 1361 aa15.92■□□□□ 0.14
MSR1-205ENST00000445506 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
MSR1-205ENST00000445506 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
MSR1-205ENST00000445506 ELL2O00472 640 aaPredicted RBP15.9■□□□□ 0.14
MSR1-205ENST00000445506 NBPF6Q5VWK0 638 aa15.9■□□□□ 0.14
MSR1-205ENST00000445506 NBPF4Q96M43 638 aa15.9■□□□□ 0.14
MSR1-205ENST00000445506 IPO9Q96P70 1041 aaKnown RBP15.9■□□□□ 0.14
MSR1-205ENST00000445506 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
MSR1-205ENST00000445506 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
MSR1-205ENST00000445506 AKAP4Q5JQC9 854 aa15.89■□□□□ 0.13
MSR1-205ENST00000445506 XIRP1Q702N8 1843 aaKnown RBP15.89■□□□□ 0.13
MSR1-205ENST00000445506 FAM208AQ9UK61 1670 aaKnown RBP15.89■□□□□ 0.13
MSR1-205ENST00000445506 TNS3Q68CZ2 1445 aa15.89■□□□□ 0.13
MSR1-205ENST00000445506 HOXB7P09629 217 aa15.89■□□□□ 0.13
MSR1-205ENST00000445506 RGS3P49796 1198 aa15.89■□□□□ 0.13
MSR1-205ENST00000445506 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
MSR1-205ENST00000445506 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
MSR1-205ENST00000445506 LTV1Q96GA3 475 aaPredicted RBP15.89■□□□□ 0.13
MSR1-205ENST00000445506 PXDNQ92626 1479 aa15.88■□□□□ 0.13
MSR1-205ENST00000445506 ANKRD24Q8TF21 1146 aa15.87■□□□□ 0.13
MSR1-205ENST00000445506 RGS12O14924 1447 aa15.87■□□□□ 0.13
MSR1-205ENST00000445506 CRYBG1Q9Y4K1 1723 aa15.86■□□□□ 0.13
MSR1-205ENST00000445506 RGPD2P0DJD1 1756 aa15.86■□□□□ 0.13
MSR1-205ENST00000445506 CCDC30Q5VVM6 783 aa15.86■□□□□ 0.13
MSR1-205ENST00000445506 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
MSR1-205ENST00000445506 COL18A1P39060 1754 aa15.85■□□□□ 0.13
MSR1-205ENST00000445506 CPDO75976 1380 aa15.85■□□□□ 0.13
MSR1-205ENST00000445506 ADAMTS7Q9UKP4 1686 aa15.85■□□□□ 0.13
MSR1-205ENST00000445506 STK31Q9BXU1 1019 aa15.85■□□□□ 0.13
MSR1-205ENST00000445506 SPATA31A3Q5VYP0 1347 aa15.85■□□□□ 0.13
MSR1-205ENST00000445506 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
MSR1-205ENST00000445506 XPCQ01831 940 aaPredicted RBP15.84■□□□□ 0.13
MSR1-205ENST00000445506 SKAP1Q86WV1 359 aa15.84■□□□□ 0.13
MSR1-205ENST00000445506 ERBB3P21860 1342 aa15.84■□□□□ 0.13
MSR1-205ENST00000445506 CCT4P50991 539 aaKnown RBP15.84■□□□□ 0.13
MSR1-205ENST00000445506 NUCB1Q02818 461 aa15.84■□□□□ 0.13
MSR1-205ENST00000445506 LMOD2Q6P5Q4 547 aa15.84■□□□□ 0.13
MSR1-205ENST00000445506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.84■□□□□ 0.13
MSR1-205ENST00000445506 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
MSR1-205ENST00000445506 KRT24Q2M2I5 525 aa15.83■□□□□ 0.12
MSR1-205ENST00000445506 RPAP2Q8IXW5 612 aaPredicted RBP15.83■□□□□ 0.12
MSR1-205ENST00000445506 USHBP1Q8N6Y0 703 aa15.83■□□□□ 0.12
MSR1-205ENST00000445506 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
MSR1-205ENST00000445506 PXDNLA1KZ92 1463 aa15.82■□□□□ 0.12
MSR1-205ENST00000445506 NOP58Q9Y2X3 529 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms