RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SMTNL1A8MU46 457 aa21.95■■□□□ 1.1
SHANK3-203ENST00000445220 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
SHANK3-203ENST00000445220 CUL7Q14999 1698 aa21.95■■□□□ 1.1
SHANK3-203ENST00000445220 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
SHANK3-203ENST00000445220 GNAI2P04899 355 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 CCDC183Q5T5S1 534 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 VPS37DQ86XT2 251 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 FAM107BQ9H098 131 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 CCDC141Q6ZP82 1450 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 TXLNAP40222 546 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 CRACR2AQ9BSW2 395 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 TBC1D2Q9BYX2 928 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 TCEAL9Q9UHQ7 104 aa21.94■■□□□ 1.1
SHANK3-203ENST00000445220 ATP2B1P20020 1258 aa21.93■■□□□ 1.1
SHANK3-203ENST00000445220 NUTM2BA6NNL0 878 aaPredicted RBP21.93■■□□□ 1.1
SHANK3-203ENST00000445220 NUTM2EB1AL46 878 aaPredicted RBP21.93■■□□□ 1.1
SHANK3-203ENST00000445220 SFPQP23246 707 aaKnown RBP eCLIP21.93■■□□□ 1.1
SHANK3-203ENST00000445220 NUTM2AQ8IVF1 878 aaPredicted RBP21.93■■□□□ 1.1
SHANK3-203ENST00000445220 SYTL4Q96C24 671 aaPredicted RBP21.93■■□□□ 1.1
SHANK3-203ENST00000445220 TNPO1Q92973 898 aaKnown RBP21.93■■□□□ 1.1
SHANK3-203ENST00000445220 CDK13Q14004 1512 aaKnown RBP21.92■■□□□ 1.1
SHANK3-203ENST00000445220 TNNT1P13805 278 aa21.92■■□□□ 1.1
SHANK3-203ENST00000445220 SART3Q15020 963 aaKnown RBP21.92■■□□□ 1.1
SHANK3-203ENST00000445220 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
SHANK3-203ENST00000445220 ERC1Q8IUD2 1116 aa21.92■■□□□ 1.1
SHANK3-203ENST00000445220 ZNF428Q96B54 188 aa21.92■■□□□ 1.1
SHANK3-203ENST00000445220 TRERF1Q96PN7 1200 aa21.92■■□□□ 1.1
SHANK3-203ENST00000445220 ZSCAN12O43309 604 aa21.91■■□□□ 1.1
SHANK3-203ENST00000445220 TIGD1Q96MW7 591 aa21.91■■□□□ 1.1
SHANK3-203ENST00000445220 AIMP1Q12904 312 aaKnown RBP21.91■■□□□ 1.1
SHANK3-203ENST00000445220 NUTM2GQ5VZR2 741 aa21.91■■□□□ 1.1
SHANK3-203ENST00000445220 CABP1Q9NZU7 370 aa21.91■■□□□ 1.1
SHANK3-203ENST00000445220 GTF2F1P35269 517 aaKnown RBP eCLIP21.91■■□□□ 1.11e-6■■■■□ 23.3
SHANK3-203ENST00000445220 SRCIN1Q9C0H9 1055 aa21.91■■□□□ 1.1
SHANK3-203ENST00000445220 RTEL1-TNFRSF6BF6WH68 1400 aa21.9■■□□□ 1.1
SHANK3-203ENST00000445220 C11orf95C9JLR9 678 aaPredicted RBP21.9■■□□□ 1.1
SHANK3-203ENST00000445220 ARHGAP29Q52LW3 1261 aa21.9■■□□□ 1.1
SHANK3-203ENST00000445220 TSR2Q969E8 191 aaKnown RBP21.9■■□□□ 1.1
SHANK3-203ENST00000445220 PCF11O94913 1555 aaKnown RBP21.9■■□□□ 1.1
SHANK3-203ENST00000445220 DYDC1Q8WWB3 177 aa21.9■■□□□ 1.1
SHANK3-203ENST00000445220 STK3Q13188 491 aa21.89■■□□□ 1.09
SHANK3-203ENST00000445220 ZFYVE27Q5T4F4 411 aa21.89■■□□□ 1.09
SHANK3-203ENST00000445220 CCT4P50991 539 aaKnown RBP21.89■■□□□ 1.09
SHANK3-203ENST00000445220 LRRFIP2Q9Y608 721 aaKnown RBP21.89■■□□□ 1.09
SHANK3-203ENST00000445220 POLR3GO15318 223 aaPredicted RBP21.88■■□□□ 1.09
SHANK3-203ENST00000445220 NEMFO60524 1076 aa21.88■■□□□ 1.09
SHANK3-203ENST00000445220 PDRG1Q9NUG6 133 aa21.88■■□□□ 1.09
SHANK3-203ENST00000445220 USP25Q9UHP3 1055 aa21.88■■□□□ 1.09
SHANK3-203ENST00000445220 EPB41L2O43491 1005 aaKnown RBP21.88■■□□□ 1.09
SHANK3-203ENST00000445220 MAP9Q49MG5 647 aa21.88■■□□□ 1.09
SHANK3-203ENST00000445220 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
SHANK3-203ENST00000445220 TRIM34Q9BYJ4 488 aa21.87■■□□□ 1.09
SHANK3-203ENST00000445220 SSFA2P28290 1259 aa21.87■■□□□ 1.09
SHANK3-203ENST00000445220 URI1O94763 535 aaPredicted RBP21.87■■□□□ 1.09
SHANK3-203ENST00000445220 NEFHP12036 1026 aa21.87■■□□□ 1.09
SHANK3-203ENST00000445220 STIM1Q13586 685 aa21.87■■□□□ 1.09
SHANK3-203ENST00000445220 BLOC1S2Q6QNY1 142 aa21.87■■□□□ 1.09
SHANK3-203ENST00000445220 CCDC148Q8NFR7 591 aa21.87■■□□□ 1.09
SHANK3-203ENST00000445220 ESCO1Q5FWF5 840 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 CCDC43Q96MW1 224 aaKnown RBP21.86■■□□□ 1.09
SHANK3-203ENST00000445220 SPDYE4A6NLX3 237 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 CFAP100Q494V2 611 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 DDX11Q96FC9 970 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 FBXO3Q9UK99 471 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 SLFN5Q08AF3 891 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 BMS1Q14692 1282 aaKnown RBP21.86■■□□□ 1.09
SHANK3-203ENST00000445220 KLHL34Q8N239 644 aa21.86■■□□□ 1.09
SHANK3-203ENST00000445220 C16orf45Q96MC5 204 aaPredicted RBP21.85■■□□□ 1.09
SHANK3-203ENST00000445220 RAD21O60216 631 aa21.85■■□□□ 1.09
SHANK3-203ENST00000445220 KDM4AO75164 1064 aa21.85■■□□□ 1.09
SHANK3-203ENST00000445220 JAKMIP3Q5VZ66 844 aa21.85■■□□□ 1.09
SHANK3-203ENST00000445220 MCM3P25205 808 aa21.85■■□□□ 1.09
SHANK3-203ENST00000445220 ENOX2Q16206 610 aaKnown RBP21.85■■□□□ 1.09
SHANK3-203ENST00000445220 TAX1BP1Q86VP1 789 aa21.85■■□□□ 1.09
SHANK3-203ENST00000445220 FCHSD2O94868 740 aa21.85■■□□□ 1.09
SHANK3-203ENST00000445220 DNAJC2Q99543 621 aaKnown RBP21.85■■□□□ 1.09
SHANK3-203ENST00000445220 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
SHANK3-203ENST00000445220 CAMSAP2Q08AD1 1489 aa21.84■■□□□ 1.09
SHANK3-203ENST00000445220 GPATCH11Q8N954 259 aa21.84■■□□□ 1.09
SHANK3-203ENST00000445220 BBXQ8WY36 941 aaPredicted RBP21.84■■□□□ 1.09
SHANK3-203ENST00000445220 PTPN23Q9H3S7 1636 aa21.83■■□□□ 1.09
SHANK3-203ENST00000445220 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.09
SHANK3-203ENST00000445220 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
SHANK3-203ENST00000445220 UBAP1LF5GYI3 381 aa21.83■■□□□ 1.09
SHANK3-203ENST00000445220 CAMK4Q16566 473 aa21.83■■□□□ 1.09
SHANK3-203ENST00000445220 KLHL40Q2TBA0 621 aa21.83■■□□□ 1.09
SHANK3-203ENST00000445220 ANO10Q9NW15 660 aa21.83■■□□□ 1.09
SHANK3-203ENST00000445220 TATP17735 454 aaPredicted RBP21.83■■□□□ 1.09
SHANK3-203ENST00000445220 JAKMIP1Q96N16 626 aaKnown RBP21.83■■□□□ 1.09
SHANK3-203ENST00000445220 SLC4A2P04920 1241 aa21.82■■□□□ 1.08
SHANK3-203ENST00000445220 UVSSAQ2YD98 709 aa21.82■■□□□ 1.08
SHANK3-203ENST00000445220 KRT222Q8N1A0 295 aa21.82■■□□□ 1.08
SHANK3-203ENST00000445220 XRCC6P12956 609 aaKnown RBP eCLIP21.82■■□□□ 1.08
SHANK3-203ENST00000445220 CASQ1P31415 396 aa21.82■■□□□ 1.08
SHANK3-203ENST00000445220 SEPT7Q16181 437 aaKnown RBP21.82■■□□□ 1.08
SHANK3-203ENST00000445220 SCAND2PQ9GZW5 306 aaPredicted RBP21.82■■□□□ 1.08
SHANK3-203ENST00000445220 MICALCLQ6ZW33 695 aa21.82■■□□□ 1.08
SHANK3-203ENST00000445220 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms