RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 AKT1S1Q96B36 256 aa8.38□□□□□ -1.07
PTPRR-204ENST00000440835 ANP32EQ9BTT0 268 aa8.38□□□□□ -1.07
PTPRR-204ENST00000440835 POLD1P28340 1107 aa8.38□□□□□ -1.07
PTPRR-204ENST00000440835 SYT17Q9BSW7 474 aa8.38□□□□□ -1.07
PTPRR-204ENST00000440835 NSD3Q9BZ95 1437 aa8.38□□□□□ -1.07
PTPRR-204ENST00000440835 FLAD1Q8NFF5 587 aa8.37□□□□□ -1.07
PTPRR-204ENST00000440835 SLC12A5Q9H2X9 1139 aa8.37□□□□□ -1.07
PTPRR-204ENST00000440835 TUBGCP6Q96RT7 1819 aa8.37□□□□□ -1.07
PTPRR-204ENST00000440835 ZBTB7AO95365 584 aa8.37□□□□□ -1.07
PTPRR-204ENST00000440835 CCER1Q8TC90 406 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-204ENST00000440835 TESK2Q96S53 571 aa8.37□□□□□ -1.07
PTPRR-204ENST00000440835 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
PTPRR-204ENST00000440835 HOXC9P31274 260 aa8.36□□□□□ -1.07
PTPRR-204ENST00000440835 PTF1AQ7RTS3 328 aa8.36□□□□□ -1.07
PTPRR-204ENST00000440835 ANKRD26Q9UPS8 1709 aa8.36□□□□□ -1.07
PTPRR-204ENST00000440835 SOX12O15370 315 aa8.36□□□□□ -1.07
PTPRR-204ENST00000440835 TMF1P82094 1093 aa8.36□□□□□ -1.07
PTPRR-204ENST00000440835 ZCRB1Q8TBF4 217 aaKnown RBP8.36□□□□□ -1.07
PTPRR-204ENST00000440835 FHDC1Q9C0D6 1143 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-204ENST00000440835 PKD1L3Q7Z443 1732 aa8.36□□□□□ -1.07
PTPRR-204ENST00000440835 INSRP06213 1382 aa8.35□□□□□ -1.07
PTPRR-204ENST00000440835 C5P01031 1676 aa8.35□□□□□ -1.07
PTPRR-204ENST00000440835 AMPHP49418 695 aa8.35□□□□□ -1.07
PTPRR-204ENST00000440835 ATF5Q9Y2D1 282 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-204ENST00000440835 MAP3K19Q56UN5 1328 aa8.35□□□□□ -1.07
PTPRR-204ENST00000440835 NCAPD2Q15021 1401 aa8.35□□□□□ -1.07
PTPRR-204ENST00000440835 RGPD2P0DJD1 1756 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 FLT4P35916 1363 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 KAT6BQ8WYB5 2073 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 PCDH11XQ9BZA7 1347 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 PCDH11YQ9BZA8 1340 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 USP47Q96K76 1375 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 GRIN3BO60391 1043 aa8.34□□□□□ -1.07
PTPRR-204ENST00000440835 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
PTPRR-204ENST00000440835 ZNF827Q17R98 1081 aa8.33□□□□□ -1.08
PTPRR-204ENST00000440835 RAPGEF4Q8WZA2 1011 aa8.33□□□□□ -1.08
PTPRR-204ENST00000440835 LRRC4BQ9NT99 713 aa8.33□□□□□ -1.08
PTPRR-204ENST00000440835 PNPLA7Q6ZV29 1317 aa8.33□□□□□ -1.08
PTPRR-204ENST00000440835 TATP17735 454 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-204ENST00000440835 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
PTPRR-204ENST00000440835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPRR-204ENST00000440835 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
PTPRR-204ENST00000440835 MEGF6O75095 1541 aa8.32□□□□□ -1.08
PTPRR-204ENST00000440835 ST20-MTHFSA0A0A6YYL1 179 aa8.32□□□□□ -1.08
PTPRR-204ENST00000440835 PDGFDQ9GZP0 370 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-204ENST00000440835 DDX54Q8TDD1 881 aaKnown RBP8.32□□□□□ -1.08
PTPRR-204ENST00000440835 TFCP2L1Q9NZI6 479 aa8.32□□□□□ -1.08
PTPRR-204ENST00000440835 FYB1O15117 783 aa8.31□□□□□ -1.08
PTPRR-204ENST00000440835 PRIM1P49642 420 aaKnown RBP8.31□□□□□ -1.08
PTPRR-204ENST00000440835 CD2APQ9Y5K6 639 aa8.31□□□□□ -1.08
PTPRR-204ENST00000440835 ITGB4P16144 1822 aa8.31□□□□□ -1.08
PTPRR-204ENST00000440835 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
PTPRR-204ENST00000440835 CCNL1Q9UK58 526 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-204ENST00000440835 NKX1-1Q15270 411 aaPredicted RBP8.3□□□□□ -1.08
PTPRR-204ENST00000440835 GPR162Q16538 588 aa8.3□□□□□ -1.08
PTPRR-204ENST00000440835 C4BP0C0L5 1744 aa8.3□□□□□ -1.08
PTPRR-204ENST00000440835 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
PTPRR-204ENST00000440835 UBR3Q6ZT12 1888 aa8.29□□□□□ -1.08
PTPRR-204ENST00000440835 C1QTNF8P60827 252 aa8.29□□□□□ -1.08
PTPRR-204ENST00000440835 NBPF6Q5VWK0 638 aa8.29□□□□□ -1.08
PTPRR-204ENST00000440835 LTV1Q96GA3 475 aaPredicted RBP8.29□□□□□ -1.08
PTPRR-204ENST00000440835 NBPF4Q96M43 638 aa8.29□□□□□ -1.08
PTPRR-204ENST00000440835 TOGARAM1Q9Y4F4 1720 aa8.28□□□□□ -1.08
PTPRR-204ENST00000440835 SRCAPQ6ZRS2 3230 aa8.28□□□□□ -1.08
PTPRR-204ENST00000440835 WASHC2AQ641Q2 1341 aa8.28□□□□□ -1.08
PTPRR-204ENST00000440835 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
PTPRR-204ENST00000440835 MAP2P11137 1827 aaKnown RBP8.28□□□□□ -1.08
PTPRR-204ENST00000440835 PALLDQ8WX93 1383 aa8.28□□□□□ -1.08
PTPRR-204ENST00000440835 SYTL4Q96C24 671 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-204ENST00000440835 CICQ96RK0 1608 aaPredicted RBP8.28□□□□□ -1.08
PTPRR-204ENST00000440835 SSFA2P28290 1259 aa8.27□□□□□ -1.09
PTPRR-204ENST00000440835 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.09
PTPRR-204ENST00000440835 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-204ENST00000440835 COL23A1Q86Y22 540 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-204ENST00000440835 HSP90AB1P08238 724 aaKnown RBP8.26□□□□□ -1.09
PTPRR-204ENST00000440835 RRS1Q15050 365 aaKnown RBP8.25□□□□□ -1.09
PTPRR-204ENST00000440835 GGNBP2Q9H3C7 697 aa8.25□□□□□ -1.09
PTPRR-204ENST00000440835 AK7Q96M32 723 aa8.25□□□□□ -1.09
PTPRR-204ENST00000440835 TSHZ2Q9NRE2 1034 aa8.25□□□□□ -1.09
PTPRR-204ENST00000440835 ADRA2BP18089 450 aa8.25□□□□□ -1.09
PTPRR-204ENST00000440835 CYP27B1O15528 508 aa8.24□□□□□ -1.09
PTPRR-204ENST00000440835 HSP90AB2PQ58FF8 381 aa8.24□□□□□ -1.09
PTPRR-204ENST00000440835 IFNL2Q8IZJ0 200 aa8.24□□□□□ -1.09
PTPRR-204ENST00000440835 ERVV-2B6SEH9 535 aa8.24□□□□□ -1.09
PTPRR-204ENST00000440835 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
PTPRR-204ENST00000440835 ADCY9O60503 1353 aa8.24□□□□□ -1.09
PTPRR-204ENST00000440835 COL5A3P25940 1745 aaPredicted RBP8.23□□□□□ -1.09
PTPRR-204ENST00000440835 MSH5O43196 834 aa8.23□□□□□ -1.09
PTPRR-204ENST00000440835 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
PTPRR-204ENST00000440835 AMOTQ4VCS5 1084 aa8.22□□□□□ -1.09
PTPRR-204ENST00000440835 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
PTPRR-204ENST00000440835 SENP3-EIF4A1A0A087X0R7 540 aa8.22□□□□□ -1.09
PTPRR-204ENST00000440835 MPRIPQ6WCQ1 1025 aa8.22□□□□□ -1.09
PTPRR-204ENST00000440835 NLGN2Q8NFZ4 835 aa8.22□□□□□ -1.09
PTPRR-204ENST00000440835 PIGBQ92521 554 aa8.22□□□□□ -1.09
PTPRR-204ENST00000440835 KDRP35968 1356 aa8.22□□□□□ -1.09
PTPRR-204ENST00000440835 LOC102724428A0A0B4J2F2 783 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms