RNA–Protein interactions for RNA: ENST00000440239.5

CHTF18-204, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 1 (best)

Gene CHTF18, Length 1,801 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-204ENST00000440239 FAM182BQ5T319 152 aa30.84■■■□□ 2.53
CHTF18-204ENST00000440239 NCAPD2Q15021 1401 aa30.84■■■□□ 2.53
CHTF18-204ENST00000440239 OVOS2A0A0G2JMS6 1433 aa30.8■■■□□ 2.52
CHTF18-204ENST00000440239 ZCRB1Q8TBF4 217 aaKnown RBP30.8■■■□□ 2.52
CHTF18-204ENST00000440239 DDX54Q8TDD1 881 aaKnown RBP30.8■■■□□ 2.52
CHTF18-204ENST00000440239 TNS2Q63HR2 1409 aa30.8■■■□□ 2.52
CHTF18-204ENST00000440239 CCDC184Q52MB2 194 aa30.79■■■□□ 2.52
CHTF18-204ENST00000440239 KDRP35968 1356 aa30.78■■■□□ 2.52
CHTF18-204ENST00000440239 MRS2Q9HD23 443 aa30.76■■■□□ 2.51
CHTF18-204ENST00000440239 WDR43Q15061 677 aaKnown RBP eCLIP30.75■■■□□ 2.51
CHTF18-204ENST00000440239 MARCH10Q8NA82 808 aaPredicted RBP30.75■■■□□ 2.51
CHTF18-204ENST00000440239 EP400Q96L91 3159 aa30.75■■■□□ 2.51
CHTF18-204ENST00000440239 SPG7Q9UQ90 795 aa30.75■■■□□ 2.51
CHTF18-204ENST00000440239 PRKAR2BP31323 418 aa30.73■■■□□ 2.51
CHTF18-204ENST00000440239 PLEKHO1Q53GL0 409 aaPredicted RBP30.72■■■□□ 2.51
CHTF18-204ENST00000440239 SHANK3Q9BYB0 1731 aa30.71■■■□□ 2.51
CHTF18-204ENST00000440239 RSPH6AQ9H0K4 717 aa30.71■■■□□ 2.51
CHTF18-204ENST00000440239 PKD1L3Q7Z443 1732 aa30.7■■■□□ 2.51
CHTF18-204ENST00000440239 PCDH11XQ9BZA7 1347 aa30.7■■■□□ 2.51
CHTF18-204ENST00000440239 PCDH11YQ9BZA8 1340 aa30.7■■■□□ 2.51
CHTF18-204ENST00000440239 FCHSD2O94868 740 aa30.68■■■□□ 2.5
CHTF18-204ENST00000440239 AMOTQ4VCS5 1084 aa30.68■■■□□ 2.5
CHTF18-204ENST00000440239 ZNF530Q6P9A1 599 aaPredicted RBP30.67■■■□□ 2.5
CHTF18-204ENST00000440239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.67■■■□□ 2.52e-6■■□□□ 11.9
CHTF18-204ENST00000440239 CYP27B1O15528 508 aa30.66■■■□□ 2.5
CHTF18-204ENST00000440239 FAM196AQ6ZSG2 479 aa30.66■■■□□ 2.5
CHTF18-204ENST00000440239 KAT6BQ8WYB5 2073 aa30.66■■■□□ 2.5
CHTF18-204ENST00000440239 ADAMTS8Q9UP79 889 aa30.65■■■□□ 2.5
CHTF18-204ENST00000440239 NEFMP07197 916 aa30.64■■■□□ 2.5
CHTF18-204ENST00000440239 MIER1Q8N108 512 aa30.64■■■□□ 2.5
CHTF18-204ENST00000440239 PHACTR3Q96KR7 559 aa30.64■■■□□ 2.5
CHTF18-204ENST00000440239 MTHFSDQ2M296 383 aaKnown RBP30.63■■■□□ 2.49
CHTF18-204ENST00000440239 C1orf141Q5JVX7 400 aa30.63■■■□□ 2.49
CHTF18-204ENST00000440239 IFNL2Q8IZJ0 200 aa30.63■■■□□ 2.49
CHTF18-204ENST00000440239 ACSBG1Q96GR2 724 aa30.63■■■□□ 2.49
CHTF18-204ENST00000440239 PHKG2P15735 406 aa30.61■■■□□ 2.49
CHTF18-204ENST00000440239 CCDC146Q8IYE0 955 aa30.61■■■□□ 2.49
CHTF18-204ENST00000440239 PLEKHG2Q9H7P9 1386 aa30.61■■■□□ 2.49
CHTF18-204ENST00000440239 PNNQ9H307 717 aaKnown RBP30.61■■■□□ 2.49
CHTF18-204ENST00000440239 MAPK8IP3Q9UPT6 1336 aa30.59■■■□□ 2.49
CHTF18-204ENST00000440239 TRIM37O94972 964 aa30.59■■■□□ 2.49
CHTF18-204ENST00000440239 PNISRQ8TF01 805 aaKnown RBP30.58■■■□□ 2.49
CHTF18-204ENST00000440239 SYTL4Q96C24 671 aaPredicted RBP30.58■■■□□ 2.49
CHTF18-204ENST00000440239 FAM9BQ8IZU0 186 aa30.57■■■□□ 2.48
CHTF18-204ENST00000440239 GAS2L2Q8NHY3 880 aa30.57■■■□□ 2.48
CHTF18-204ENST00000440239 PLEKHF1Q96S99 279 aa30.57■■■□□ 2.48
CHTF18-204ENST00000440239 SBF2Q86WG5 1849 aa30.55■■■□□ 2.48
CHTF18-204ENST00000440239 DOT1LQ8TEK3 1739 aa30.55■■■□□ 2.48
CHTF18-204ENST00000440239 AKAP4Q5JQC9 854 aa30.54■■■□□ 2.48
CHTF18-204ENST00000440239 MPRIPQ6WCQ1 1025 aa30.54■■■□□ 2.48
CHTF18-204ENST00000440239 KCNQ2O43526 872 aa30.54■■■□□ 2.48
CHTF18-204ENST00000440239 CCER2I3L3R5 266 aa30.52■■■□□ 2.48
CHTF18-204ENST00000440239 HSP90AB1P08238 724 aaKnown RBP30.52■■■□□ 2.48
CHTF18-204ENST00000440239 PRIM1P49642 420 aaKnown RBP30.52■■■□□ 2.48
CHTF18-204ENST00000440239 SF3B2Q13435 895 aaKnown RBP30.52■■■□□ 2.48
CHTF18-204ENST00000440239 PTF1AQ7RTS3 328 aa30.52■■■□□ 2.48
CHTF18-204ENST00000440239 UPF1Q92900 1129 aaKnown RBP eCLIP30.52■■■□□ 2.48
CHTF18-204ENST00000440239 BCL9O00512 1426 aa30.51■■■□□ 2.47
CHTF18-204ENST00000440239 NKX1-1Q15270 411 aaPredicted RBP30.51■■■□□ 2.47
CHTF18-204ENST00000440239 RUNDC1Q96C34 613 aa30.51■■■□□ 2.47
CHTF18-204ENST00000440239 DCAF5Q96JK2 942 aa30.5■■■□□ 2.47
CHTF18-204ENST00000440239 GNAT3A8MTJ3 354 aa30.49■■■□□ 2.47
CHTF18-204ENST00000440239 TOGARAM1Q9Y4F4 1720 aa30.49■■■□□ 2.47
CHTF18-204ENST00000440239 MAP3K5Q99683 1374 aa30.49■■■□□ 2.47
CHTF18-204ENST00000440239 NEUROD2Q15784 382 aa30.47■■■□□ 2.47
CHTF18-204ENST00000440239 NHSQ6T4R5 1651 aa30.47■■■□□ 2.47
CHTF18-204ENST00000440239 BCL11BQ9C0K0 894 aaPredicted RBP30.47■■■□□ 2.47
CHTF18-204ENST00000440239 LGR6Q9HBX8 967 aa30.47■■■□□ 2.47
CHTF18-204ENST00000440239 RRP7AQ9Y3A4 280 aaKnown RBP30.47■■■□□ 2.47
CHTF18-204ENST00000440239 KDM6AO15550 1401 aaPredicted RBP30.47■■■□□ 2.47
CHTF18-204ENST00000440239 SENP3-EIF4A1A0A087X0R7 540 aa30.46■■■□□ 2.47
CHTF18-204ENST00000440239 NFE2L2Q16236 605 aa30.46■■■□□ 2.47
CHTF18-204ENST00000440239 APBA3O96018 575 aa30.45■■■□□ 2.47
CHTF18-204ENST00000440239 RTF1Q92541 710 aaKnown RBP30.45■■■□□ 2.46
CHTF18-204ENST00000440239 VIRMAQ69YN4 1812 aaKnown RBP30.44■■■□□ 2.46
CHTF18-204ENST00000440239 SOCS7O14512 581 aa30.44■■■□□ 2.46
CHTF18-204ENST00000440239 DLG5Q8TDM6 1919 aa30.44■■■□□ 2.46
CHTF18-204ENST00000440239 ITGB4P16144 1822 aa30.44■■■□□ 2.46
CHTF18-204ENST00000440239 TNS1Q9HBL0 1735 aaKnown RBP30.44■■■□□ 2.46
CHTF18-204ENST00000440239 RNMTO43148 476 aaKnown RBP30.43■■■□□ 2.46
CHTF18-204ENST00000440239 CABP4P57796 275 aa30.43■■■□□ 2.46
CHTF18-204ENST00000440239 CCDC125Q86Z20 511 aa30.43■■■□□ 2.46
CHTF18-204ENST00000440239 TMOD3Q9NYL9 352 aa30.43■■■□□ 2.46
CHTF18-204ENST00000440239 SCN11AQ9UI33 1791 aa30.42■■■□□ 2.46
CHTF18-204ENST00000440239 RIPK4P57078 832 aa30.42■■■□□ 2.46
CHTF18-204ENST00000440239 APAF1O14727 1248 aa30.41■■■□□ 2.46
CHTF18-204ENST00000440239 TMPOP42166 694 aaKnown RBP30.41■■■□□ 2.46
CHTF18-204ENST00000440239 DCTN1Q14203 1278 aa30.41■■■□□ 2.46
CHTF18-204ENST00000440239 MCM10Q7L590 875 aa30.41■■■□□ 2.46
CHTF18-204ENST00000440239 BTAF1O14981 1849 aa30.41■■■□□ 2.46
CHTF18-204ENST00000440239 ERVV-2B6SEH9 535 aa30.4■■■□□ 2.46
CHTF18-204ENST00000440239 DEFB132Q7Z7B7 95 aa30.4■■■□□ 2.46
CHTF18-204ENST00000440239 IL17REQ8NFR9 667 aa30.39■■■□□ 2.46
CHTF18-204ENST00000440239 NFATC2IPQ8NCF5 419 aa30.38■■■□□ 2.45
CHTF18-204ENST00000440239 PIGBQ92521 554 aa30.38■■■□□ 2.45
CHTF18-204ENST00000440239 BAG6P46379 1132 aa30.38■■■□□ 2.45
CHTF18-204ENST00000440239 EN1Q05925 392 aaPredicted RBP30.36■■■□□ 2.45
CHTF18-204ENST00000440239 TEFQ10587 303 aa30.36■■■□□ 2.45
CHTF18-204ENST00000440239 SLC52A2Q9HAB3 445 aa30.35■■■□□ 2.45
CHTF18-204ENST00000440239 THUMPD2Q9BTF0 503 aaKnown RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms