RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 BTG4Q9NY30 223 aa10.59□□□□□ -0.71
HCG20-208ENST00000439406 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 GRXCR2A6NFK2 248 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 POTEHQ6S545 545 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 SND1Q7KZF4 910 aaKnown RBP eCLIP10.58□□□□□ -0.72
HCG20-208ENST00000439406 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
HCG20-208ENST00000439406 BANK1Q8NDB2 785 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 PBXIP1Q96AQ6 731 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 RBM42Q9BTD8 480 aaKnown RBP10.58□□□□□ -0.72
HCG20-208ENST00000439406 SPON1Q9HCB6 807 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 STK26Q9P289 416 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 CLTCL1P53675 1640 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 TECPR2O15040 1411 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.72
HCG20-208ENST00000439406 APBA3O96018 575 aa10.57□□□□□ -0.72
HCG20-208ENST00000439406 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
HCG20-208ENST00000439406 IVNS1ABPQ9Y6Y0 642 aa10.57□□□□□ -0.72
HCG20-208ENST00000439406 KIF1AQ12756 1690 aa10.57□□□□□ -0.72
HCG20-208ENST00000439406 KCNQ2O43526 872 aa10.56□□□□□ -0.72
HCG20-208ENST00000439406 TRIM37O94972 964 aa10.56□□□□□ -0.72
HCG20-208ENST00000439406 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
HCG20-208ENST00000439406 REPIN1Q9BWE0 567 aaKnown RBP10.56□□□□□ -0.72
HCG20-208ENST00000439406 PPP1R1BQ9UD71 204 aaPredicted RBP10.56□□□□□ -0.72
HCG20-208ENST00000439406 ITGAEP38570 1179 aa10.55□□□□□ -0.72
HCG20-208ENST00000439406 IFFO2Q5TF58 517 aa10.55□□□□□ -0.72
HCG20-208ENST00000439406 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
HCG20-208ENST00000439406 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
HCG20-208ENST00000439406 PLCH1Q4KWH8 1693 aa10.54□□□□□ -0.72
HCG20-208ENST00000439406 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
HCG20-208ENST00000439406 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
HCG20-208ENST00000439406 CLCN1P35523 988 aa10.53□□□□□ -0.72
HCG20-208ENST00000439406 GLMNQ92990 594 aa10.53□□□□□ -0.72
HCG20-208ENST00000439406 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
HCG20-208ENST00000439406 ADGRF5Q8IZF2 1346 aa10.53□□□□□ -0.72
HCG20-208ENST00000439406 TMEM132EQ6IEE7 984 aa10.52□□□□□ -0.73
HCG20-208ENST00000439406 NRXN1Q9ULB1 1477 aa10.52□□□□□ -0.73
HCG20-208ENST00000439406 FMN2Q9NZ56 1722 aa10.52□□□□□ -0.73
HCG20-208ENST00000439406 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
HCG20-208ENST00000439406 PPLO60437 1756 aa10.52□□□□□ -0.73
HCG20-208ENST00000439406 ANKRD30BQ9BXX2 1392 aa10.52□□□□□ -0.73
HCG20-208ENST00000439406 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.73
HCG20-208ENST00000439406 PDE3BQ13370 1112 aa10.51□□□□□ -0.73
HCG20-208ENST00000439406 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
HCG20-208ENST00000439406 ADGRB2O60241 1585 aa10.51□□□□□ -0.73
HCG20-208ENST00000439406 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
HCG20-208ENST00000439406 COL14A1Q05707 1796 aaKnown RBP10.5□□□□□ -0.73
HCG20-208ENST00000439406 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.5□□□□□ -0.73
HCG20-208ENST00000439406 GDPD2Q9HCC8 539 aa10.5□□□□□ -0.73
HCG20-208ENST00000439406 GPRASP1Q5JY77 1395 aa10.5□□□□□ -0.73
HCG20-208ENST00000439406 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
HCG20-208ENST00000439406 UNCXA6NJT0 531 aa10.49□□□□□ -0.73
HCG20-208ENST00000439406 SSTR3P32745 418 aaPredicted RBP10.49□□□□□ -0.73
HCG20-208ENST00000439406 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
HCG20-208ENST00000439406 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
HCG20-208ENST00000439406 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
HCG20-208ENST00000439406 PRM3Q9NNZ6 103 aa10.49□□□□□ -0.73
HCG20-208ENST00000439406 GPCPD1Q9NPB8 672 aa10.49□□□□□ -0.73
HCG20-208ENST00000439406 PRDM11Q9NQV5 511 aa10.49□□□□□ -0.73
HCG20-208ENST00000439406 NRAPQ86VF7 1730 aa10.49□□□□□ -0.73
HCG20-208ENST00000439406 YTHDC2Q9H6S0 1430 aaKnown RBP10.49□□□□□ -0.73
HCG20-208ENST00000439406 THSD7AQ9UPZ6 1657 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 RGPD8O14715 1765 aaPredicted RBP10.48□□□□□ -0.73
HCG20-208ENST00000439406 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 TBC1D12O60347 775 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 OSBPP22059 807 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 C1QTNF8P60827 252 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 RGL3Q3MIN7 710 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 TMEM259Q4ZIN3 620 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 BEGAINQ9BUH8 593 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 TMUB1Q9BVT8 246 aa10.48□□□□□ -0.73
HCG20-208ENST00000439406 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
HCG20-208ENST00000439406 RBM47A0AV96 593 aaKnown RBP10.47□□□□□ -0.73
HCG20-208ENST00000439406 PLSCR1O15162 318 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 RFC5P40937 340 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 EVA1CP58658 441 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 IGSF5Q9NSI5 407 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 ANKARQ7Z5J8 1434 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 KNDC1Q76NI1 1749 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 ABCA3Q99758 1704 aa10.47□□□□□ -0.73
HCG20-208ENST00000439406 RFX1P22670 979 aa10.46□□□□□ -0.73
HCG20-208ENST00000439406 ABL2P42684 1182 aa10.46□□□□□ -0.73
HCG20-208ENST00000439406 THRAP3Q9Y2W1 955 aaKnown RBP10.46□□□□□ -0.73
HCG20-208ENST00000439406 CLSPNQ9HAW4 1339 aa10.46□□□□□ -0.73
HCG20-208ENST00000439406 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.45□□□□□ -0.74
HCG20-208ENST00000439406 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
HCG20-208ENST00000439406 PRAM1Q96QH2 718 aa10.45□□□□□ -0.74
HCG20-208ENST00000439406 POGKQ9P215 609 aa10.45□□□□□ -0.74
HCG20-208ENST00000439406 PIK3C2GO75747 1445 aa10.44□□□□□ -0.74
HCG20-208ENST00000439406 POM121CA8CG34 1229 aa10.44□□□□□ -0.74
HCG20-208ENST00000439406 PPM1GO15355 546 aaPredicted RBP10.44□□□□□ -0.74
HCG20-208ENST00000439406 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
HCG20-208ENST00000439406 TCP11L2Q8N4U5 519 aa10.44□□□□□ -0.74
HCG20-208ENST00000439406 AKT1S1Q96B36 256 aa10.44□□□□□ -0.74
HCG20-208ENST00000439406 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
HCG20-208ENST00000439406 RREB1Q92766 1687 aa10.44□□□□□ -0.74
HCG20-208ENST00000439406 EIF3AQ14152 1382 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms