RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 YBX3P16989 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00578-201ENST00000439009 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
LINC00578-201ENST00000439009 COL23A1Q86Y22 540 aaPredicted RBP11.19□□□□□ -0.62
LINC00578-201ENST00000439009 GOLGB1Q14789 3259 aaKnown RBP11.19□□□□□ -0.62
LINC00578-201ENST00000439009 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
LINC00578-201ENST00000439009 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
LINC00578-201ENST00000439009 SYTL4Q96C24 671 aaPredicted RBP11.18□□□□□ -0.62
LINC00578-201ENST00000439009 LTV1Q96GA3 475 aaPredicted RBP11.18□□□□□ -0.62
LINC00578-201ENST00000439009 COG3Q96JB2 828 aa11.18□□□□□ -0.62
LINC00578-201ENST00000439009 TESK2Q96S53 571 aa11.18□□□□□ -0.62
LINC00578-201ENST00000439009 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
LINC00578-201ENST00000439009 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
LINC00578-201ENST00000439009 NBPF6Q5VWK0 638 aa11.17□□□□□ -0.62
LINC00578-201ENST00000439009 KLHL34Q8N239 644 aa11.17□□□□□ -0.62
LINC00578-201ENST00000439009 NBPF4Q96M43 638 aa11.17□□□□□ -0.62
LINC00578-201ENST00000439009 CD2APQ9Y5K6 639 aa11.17□□□□□ -0.62
LINC00578-201ENST00000439009 FBLN1P23142 703 aa11.16□□□□□ -0.62
LINC00578-201ENST00000439009 AMPHP49418 695 aa11.16□□□□□ -0.62
LINC00578-201ENST00000439009 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
LINC00578-201ENST00000439009 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
LINC00578-201ENST00000439009 LTN1O94822 1766 aa11.16□□□□□ -0.62
LINC00578-201ENST00000439009 RTL1A6NKG5 1358 aa11.16□□□□□ -0.62
LINC00578-201ENST00000439009 USP47Q96K76 1375 aa11.16□□□□□ -0.62
LINC00578-201ENST00000439009 MEGF6O75095 1541 aa11.15□□□□□ -0.62
LINC00578-201ENST00000439009 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.63
LINC00578-201ENST00000439009 FYB1O15117 783 aa11.14□□□□□ -0.63
LINC00578-201ENST00000439009 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
LINC00578-201ENST00000439009 LY75O60449 1722 aa11.13□□□□□ -0.63
LINC00578-201ENST00000439009 ST20-MTHFSA0A0A6YYL1 179 aa11.13□□□□□ -0.63
LINC00578-201ENST00000439009 MSH5O43196 834 aa11.12□□□□□ -0.63
LINC00578-201ENST00000439009 RRS1Q15050 365 aaKnown RBP11.12□□□□□ -0.63
LINC00578-201ENST00000439009 RAPGEF4Q8WZA2 1011 aa11.12□□□□□ -0.63
LINC00578-201ENST00000439009 ADCY9O60503 1353 aa11.12□□□□□ -0.63
LINC00578-201ENST00000439009 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
LINC00578-201ENST00000439009 CYP27B1O15528 508 aa11.11□□□□□ -0.63
LINC00578-201ENST00000439009 TATP17735 454 aaPredicted RBP11.11□□□□□ -0.63
LINC00578-201ENST00000439009 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
LINC00578-201ENST00000439009 INSRP06213 1382 aa11.11□□□□□ -0.63
LINC00578-201ENST00000439009 KIF24Q5T7B8 1368 aa11.11□□□□□ -0.63
LINC00578-201ENST00000439009 PCDH11XQ9BZA7 1347 aa11.1□□□□□ -0.63
LINC00578-201ENST00000439009 PCDH11YQ9BZA8 1340 aa11.1□□□□□ -0.63
LINC00578-201ENST00000439009 KAT6BQ8WYB5 2073 aa11.1□□□□□ -0.63
LINC00578-201ENST00000439009 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
LINC00578-201ENST00000439009 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
LINC00578-201ENST00000439009 USHBP1Q8N6Y0 703 aa11.1□□□□□ -0.63
LINC00578-201ENST00000439009 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
LINC00578-201ENST00000439009 PALLDQ8WX93 1383 aa11.1□□□□□ -0.63
LINC00578-201ENST00000439009 HSP90AB2PQ58FF8 381 aa11.09□□□□□ -0.63
LINC00578-201ENST00000439009 AMIGO3Q86WK7 504 aa11.09□□□□□ -0.63
LINC00578-201ENST00000439009 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
LINC00578-201ENST00000439009 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
LINC00578-201ENST00000439009 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
LINC00578-201ENST00000439009 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
LINC00578-201ENST00000439009 HSPA6P17066 643 aa11.08□□□□□ -0.64
LINC00578-201ENST00000439009 MPRIPQ6WCQ1 1025 aa11.08□□□□□ -0.64
LINC00578-201ENST00000439009 PIGBQ92521 554 aa11.08□□□□□ -0.64
LINC00578-201ENST00000439009 FLT4P35916 1363 aa11.07□□□□□ -0.64
LINC00578-201ENST00000439009 TONSLQ96HA7 1378 aa11.07□□□□□ -0.64
LINC00578-201ENST00000439009 SSFA2P28290 1259 aa11.07□□□□□ -0.64
LINC00578-201ENST00000439009 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
LINC00578-201ENST00000439009 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
LINC00578-201ENST00000439009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
LINC00578-201ENST00000439009 AK7Q96M32 723 aa11.06□□□□□ -0.64
LINC00578-201ENST00000439009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00578-201ENST00000439009 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
LINC00578-201ENST00000439009 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
LINC00578-201ENST00000439009 SIK1P57059 783 aa11.05□□□□□ -0.64
LINC00578-201ENST00000439009 TMF1P82094 1093 aa11.05□□□□□ -0.64
LINC00578-201ENST00000439009 KIF3CO14782 793 aa11.04□□□□□ -0.64
LINC00578-201ENST00000439009 LINC00116Q8NCU8 138 aa11.04□□□□□ -0.64
LINC00578-201ENST00000439009 CARD14Q9BXL6 1004 aa11.04□□□□□ -0.64
LINC00578-201ENST00000439009 SPG7Q9UQ90 795 aa11.04□□□□□ -0.64
LINC00578-201ENST00000439009 C5P01031 1676 aa11.04□□□□□ -0.64
LINC00578-201ENST00000439009 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
LINC00578-201ENST00000439009 CDCA8Q53HL2 280 aa11.03□□□□□ -0.64
LINC00578-201ENST00000439009 SMIM5Q71RC9 77 aa11.03□□□□□ -0.64
LINC00578-201ENST00000439009 WASHC2AQ641Q2 1341 aa11.03□□□□□ -0.64
LINC00578-201ENST00000439009 C4BP0C0L5 1744 aa11.02□□□□□ -0.65
LINC00578-201ENST00000439009 PHF14O94880 888 aa11.02□□□□□ -0.65
LINC00578-201ENST00000439009 ITPK1Q13572 414 aa11.02□□□□□ -0.65
LINC00578-201ENST00000439009 EMILIN1Q9Y6C2 1016 aa11.02□□□□□ -0.65
LINC00578-201ENST00000439009 PLEKHG2Q9H7P9 1386 aa11.02□□□□□ -0.65
LINC00578-201ENST00000439009 TGFB2P61812 414 aa11.01□□□□□ -0.65
LINC00578-201ENST00000439009 ZNF526Q8TF50 670 aaPredicted RBP11.01□□□□□ -0.65
LINC00578-201ENST00000439009 EYA1Q99502 592 aa11.01□□□□□ -0.65
LINC00578-201ENST00000439009 TMOD3Q9NYL9 352 aa11.01□□□□□ -0.65
LINC00578-201ENST00000439009 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
LINC00578-201ENST00000439009 TOGARAM1Q9Y4F4 1720 aa11.01□□□□□ -0.65
LINC00578-201ENST00000439009 TAF1LQ8IZX4 1826 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 CICQ96RK0 1608 aaPredicted RBP11□□□□□ -0.65
LINC00578-201ENST00000439009 GNPATO15228 680 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 MMP10P09238 476 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 PHKG2P15735 406 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 ATP6V1AP38606 617 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 APLP1P51693 650 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
LINC00578-201ENST00000439009 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 DNAJC5GQ8N7S2 189 aa11□□□□□ -0.65
LINC00578-201ENST00000439009 ATG3Q9NT62 314 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms