RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 RGPD5Q99666 1765 aa12.93□□□□□ -0.34
CUBN-204ENST00000438254 TIE1P35590 1138 aa12.92□□□□□ -0.34
CUBN-204ENST00000438254 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
CUBN-204ENST00000438254 JCADQ9P266 1359 aa12.92□□□□□ -0.34
CUBN-204ENST00000438254 FCHSD2O94868 740 aa12.91□□□□□ -0.34
CUBN-204ENST00000438254 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CUBN-204ENST00000438254 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
CUBN-204ENST00000438254 BMP2KQ9NSY1 1161 aaPredicted RBP12.91□□□□□ -0.34
CUBN-204ENST00000438254 ERBB3P21860 1342 aa12.9□□□□□ -0.34
CUBN-204ENST00000438254 COL14A1Q05707 1796 aaKnown RBP12.9□□□□□ -0.34
CUBN-204ENST00000438254 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
CUBN-204ENST00000438254 EYA1Q99502 592 aa12.9□□□□□ -0.34
CUBN-204ENST00000438254 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
CUBN-204ENST00000438254 HSPA1LP34931 641 aa12.89□□□□□ -0.35
CUBN-204ENST00000438254 CHRNA2Q15822 529 aa12.89□□□□□ -0.35
CUBN-204ENST00000438254 RUNDC1Q96C34 613 aa12.89□□□□□ -0.35
CUBN-204ENST00000438254 YTHDC1Q96MU7 727 aaKnown RBP12.89□□□□□ -0.35
CUBN-204ENST00000438254 COL5A2P05997 1499 aaPredicted RBP12.89□□□□□ -0.35
CUBN-204ENST00000438254 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
CUBN-204ENST00000438254 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 MAP3K13O43283 966 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 HNRNPUQ00839 825 aaKnown RBP eCLIP12.88□□□□□ -0.35
CUBN-204ENST00000438254 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
CUBN-204ENST00000438254 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
CUBN-204ENST00000438254 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
CUBN-204ENST00000438254 LRP6O75581 1613 aa12.87□□□□□ -0.35
CUBN-204ENST00000438254 NRAPQ86VF7 1730 aa12.86□□□□□ -0.35
CUBN-204ENST00000438254 HMOX1P09601 288 aa12.86□□□□□ -0.35
CUBN-204ENST00000438254 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
CUBN-204ENST00000438254 SULT6B1Q6IMI4 303 aa12.86□□□□□ -0.35
CUBN-204ENST00000438254 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
CUBN-204ENST00000438254 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
CUBN-204ENST00000438254 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
CUBN-204ENST00000438254 SLIT2O94813 1529 aa12.85□□□□□ -0.35
CUBN-204ENST00000438254 ZBTB7CA1YPR0 619 aa12.85□□□□□ -0.35
CUBN-204ENST00000438254 APAF1O14727 1248 aa12.85□□□□□ -0.35
CUBN-204ENST00000438254 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
CUBN-204ENST00000438254 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
CUBN-204ENST00000438254 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
CUBN-204ENST00000438254 PHACTR3Q96KR7 559 aa12.85□□□□□ -0.35
CUBN-204ENST00000438254 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
CUBN-204ENST00000438254 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
CUBN-204ENST00000438254 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
CUBN-204ENST00000438254 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
CUBN-204ENST00000438254 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
CUBN-204ENST00000438254 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
CUBN-204ENST00000438254 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
CUBN-204ENST00000438254 NWD2Q9ULI1 1742 aa12.84□□□□□ -0.35
CUBN-204ENST00000438254 TMPOP42166 694 aaKnown RBP12.83□□□□□ -0.36
CUBN-204ENST00000438254 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
CUBN-204ENST00000438254 SENP3-EIF4A1A0A087X0R7 540 aa12.81□□□□□ -0.36
CUBN-204ENST00000438254 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
CUBN-204ENST00000438254 BTG4Q9NY30 223 aa12.81□□□□□ -0.36
CUBN-204ENST00000438254 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
CUBN-204ENST00000438254 CRB1P82279 1406 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 MEGF6O75095 1541 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 CARD10Q9BWT7 1032 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
CUBN-204ENST00000438254 BCL9LQ86UU0 1499 aa12.79□□□□□ -0.36
CUBN-204ENST00000438254 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
CUBN-204ENST00000438254 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 LCE2DQ5TA82 110 aaPredicted RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 NUTM2AQ8IVF1 878 aaPredicted RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 WWC1Q8IX03 1113 aa12.79□□□□□ -0.36
CUBN-204ENST00000438254 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
CUBN-204ENST00000438254 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
CUBN-204ENST00000438254 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
CUBN-204ENST00000438254 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
CUBN-204ENST00000438254 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
CUBN-204ENST00000438254 NLRP2Q9NX02 1062 aa12.78□□□□□ -0.36
CUBN-204ENST00000438254 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
CUBN-204ENST00000438254 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
CUBN-204ENST00000438254 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
CUBN-204ENST00000438254 RIPK4P57078 832 aa12.77□□□□□ -0.37
CUBN-204ENST00000438254 PDE3BQ13370 1112 aa12.77□□□□□ -0.37
CUBN-204ENST00000438254 IER5LQ5T953 404 aa12.77□□□□□ -0.37
CUBN-204ENST00000438254 FBXO41Q8TF61 875 aa12.77□□□□□ -0.37
CUBN-204ENST00000438254 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.37
CUBN-204ENST00000438254 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
CUBN-204ENST00000438254 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
CUBN-204ENST00000438254 SEC24BO95487 1268 aa12.76□□□□□ -0.37
CUBN-204ENST00000438254 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
CUBN-204ENST00000438254 TRMT2AQ8IZ69 625 aaKnown RBP12.76□□□□□ -0.37
CUBN-204ENST00000438254 STRN4Q9NRL3 753 aa12.76□□□□□ -0.37
CUBN-204ENST00000438254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
CUBN-204ENST00000438254 SALL2Q9Y467 1007 aaPredicted RBP12.76□□□□□ -0.37
CUBN-204ENST00000438254 LRRC37A3O60309 1634 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms