RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 MAPK8IP3Q9UPT6 1336 aa13.88□□□□□ -0.19
LINC01039-201ENST00000437113 LRRC37A3O60309 1634 aa13.87□□□□□ -0.19
LINC01039-201ENST00000437113 PLEKHG2Q9H7P9 1386 aa13.87□□□□□ -0.19
LINC01039-201ENST00000437113 EXOC5O00471 708 aa13.87□□□□□ -0.19
LINC01039-201ENST00000437113 PDE3BQ13370 1112 aa13.87□□□□□ -0.19
LINC01039-201ENST00000437113 DDB1Q16531 1140 aa13.87□□□□□ -0.19
LINC01039-201ENST00000437113 CCDC146Q8IYE0 955 aa13.87□□□□□ -0.19
LINC01039-201ENST00000437113 RAPGEF4Q8WZA2 1011 aa13.87□□□□□ -0.19
LINC01039-201ENST00000437113 HMOX1P09601 288 aa13.86□□□□□ -0.19
LINC01039-201ENST00000437113 EYA1Q99502 592 aa13.86□□□□□ -0.19
LINC01039-201ENST00000437113 IGSF1Q8N6C5 1336 aa13.86□□□□□ -0.19
LINC01039-201ENST00000437113 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
LINC01039-201ENST00000437113 TNS2Q63HR2 1409 aa13.84□□□□□ -0.19
LINC01039-201ENST00000437113 FCHSD2O94868 740 aa13.84□□□□□ -0.19
LINC01039-201ENST00000437113 TATP17735 454 aaPredicted RBP13.84□□□□□ -0.19
LINC01039-201ENST00000437113 SULT6B1Q6IMI4 303 aa13.84□□□□□ -0.19
LINC01039-201ENST00000437113 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
LINC01039-201ENST00000437113 PRKAR2BP31323 418 aa13.83□□□□□ -0.2
LINC01039-201ENST00000437113 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
LINC01039-201ENST00000437113 KAT6BQ8WYB5 2073 aa13.83□□□□□ -0.2
LINC01039-201ENST00000437113 DLG5Q8TDM6 1919 aa13.82□□□□□ -0.2
LINC01039-201ENST00000437113 PKD1L3Q7Z443 1732 aa13.82□□□□□ -0.2
LINC01039-201ENST00000437113 MEGF6O75095 1541 aa13.82□□□□□ -0.2
LINC01039-201ENST00000437113 FAM196AQ6ZSG2 479 aa13.82□□□□□ -0.2
LINC01039-201ENST00000437113 RSPH6AQ9H0K4 717 aa13.82□□□□□ -0.2
LINC01039-201ENST00000437113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC01039-201ENST00000437113 KDRP35968 1356 aa13.82□□□□□ -0.2
LINC01039-201ENST00000437113 SENP3-EIF4A1A0A087X0R7 540 aa13.81□□□□□ -0.2
LINC01039-201ENST00000437113 SOCS7O14512 581 aa13.81□□□□□ -0.2
LINC01039-201ENST00000437113 CCDC125Q86Z20 511 aa13.81□□□□□ -0.2
LINC01039-201ENST00000437113 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
LINC01039-201ENST00000437113 ZCRB1Q8TBF4 217 aaKnown RBP13.81□□□□□ -0.2
LINC01039-201ENST00000437113 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
LINC01039-201ENST00000437113 BCL9O00512 1426 aa13.81□□□□□ -0.2
LINC01039-201ENST00000437113 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
LINC01039-201ENST00000437113 APAF1O14727 1248 aa13.8□□□□□ -0.2
LINC01039-201ENST00000437113 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
LINC01039-201ENST00000437113 SALL2Q9Y467 1007 aaPredicted RBP13.8□□□□□ -0.2
LINC01039-201ENST00000437113 EP400Q96L91 3159 aa13.79□□□□□ -0.2
LINC01039-201ENST00000437113 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
LINC01039-201ENST00000437113 ZBED9Q6R2W3 1325 aa13.79□□□□□ -0.2
LINC01039-201ENST00000437113 NEUROD2Q15784 382 aa13.78□□□□□ -0.2
LINC01039-201ENST00000437113 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
LINC01039-201ENST00000437113 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
LINC01039-201ENST00000437113 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
LINC01039-201ENST00000437113 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
LINC01039-201ENST00000437113 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
LINC01039-201ENST00000437113 PLEKHO1Q53GL0 409 aaPredicted RBP13.77□□□□□ -0.21
LINC01039-201ENST00000437113 VIRMAQ69YN4 1812 aaKnown RBP13.77□□□□□ -0.21
LINC01039-201ENST00000437113 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.21
LINC01039-201ENST00000437113 NGEFQ8N5V2 710 aa13.76□□□□□ -0.21
LINC01039-201ENST00000437113 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
LINC01039-201ENST00000437113 UPF1Q92900 1129 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01039-201ENST00000437113 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
LINC01039-201ENST00000437113 FAM182BQ5T319 152 aa13.75□□□□□ -0.21
LINC01039-201ENST00000437113 TMPOP42166 694 aaKnown RBP13.74□□□□□ -0.21
LINC01039-201ENST00000437113 RIPK4P57078 832 aa13.74□□□□□ -0.21
LINC01039-201ENST00000437113 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
LINC01039-201ENST00000437113 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
LINC01039-201ENST00000437113 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
LINC01039-201ENST00000437113 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
LINC01039-201ENST00000437113 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
LINC01039-201ENST00000437113 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
LINC01039-201ENST00000437113 NHSQ6T4R5 1651 aa13.73□□□□□ -0.21
LINC01039-201ENST00000437113 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
LINC01039-201ENST00000437113 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
LINC01039-201ENST00000437113 CYP27B1O15528 508 aa13.72□□□□□ -0.21
LINC01039-201ENST00000437113 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
LINC01039-201ENST00000437113 BCL11BQ9C0K0 894 aaPredicted RBP13.72□□□□□ -0.21
LINC01039-201ENST00000437113 DOT1LQ8TEK3 1739 aa13.72□□□□□ -0.21
LINC01039-201ENST00000437113 TRIM37O94972 964 aa13.71□□□□□ -0.21
LINC01039-201ENST00000437113 PHKG2P15735 406 aa13.71□□□□□ -0.21
LINC01039-201ENST00000437113 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
LINC01039-201ENST00000437113 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
LINC01039-201ENST00000437113 ITGB4P16144 1822 aa13.71□□□□□ -0.22
LINC01039-201ENST00000437113 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
LINC01039-201ENST00000437113 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
LINC01039-201ENST00000437113 RTF1Q92541 710 aaKnown RBP13.7□□□□□ -0.22
LINC01039-201ENST00000437113 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
LINC01039-201ENST00000437113 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
LINC01039-201ENST00000437113 MAP3K5Q99683 1374 aa13.7□□□□□ -0.22
LINC01039-201ENST00000437113 BTAF1O14981 1849 aa13.69□□□□□ -0.22
LINC01039-201ENST00000437113 SCN11AQ9UI33 1791 aa13.69□□□□□ -0.22
LINC01039-201ENST00000437113 BAG6P46379 1132 aa13.69□□□□□ -0.22
LINC01039-201ENST00000437113 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
LINC01039-201ENST00000437113 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
LINC01039-201ENST00000437113 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
LINC01039-201ENST00000437113 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
LINC01039-201ENST00000437113 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
LINC01039-201ENST00000437113 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
LINC01039-201ENST00000437113 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
LINC01039-201ENST00000437113 PLSCR1O15162 318 aa13.67□□□□□ -0.22
LINC01039-201ENST00000437113 APBA3O96018 575 aa13.67□□□□□ -0.22
LINC01039-201ENST00000437113 ACSBG1Q96GR2 724 aa13.67□□□□□ -0.22
LINC01039-201ENST00000437113 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
LINC01039-201ENST00000437113 ZNF521Q96K83 1311 aa13.66□□□□□ -0.22
LINC01039-201ENST00000437113 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
LINC01039-201ENST00000437113 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
LINC01039-201ENST00000437113 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
LINC01039-201ENST00000437113 ADAMTS7Q9UKP4 1686 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms