RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 LARGE2Q8N3Y3 721 aa7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 CHIC2Q9UKJ5 165 aa7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 VARSP26640 1264 aaKnown RBP7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 PKDCCQ504Y2 493 aa7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 OXLD1Q5BKU9 147 aa7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 ANKMY2Q8IV38 441 aa7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 TRMT44Q8IYL2 757 aaKnown RBP7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 CYP4X1Q8N118 509 aa7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 SNIP1Q8TAD8 396 aaKnown RBP7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 FOXJ1Q92949 421 aa7.8□□□□□ -1.16
HMGB1P45-201ENST00000435986 ST8SIA5O15466 376 aa7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 SIAH2O43255 324 aa7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 GIGYF1O75420 1035 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 PSME1Q06323 249 aa7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 PTK7Q13308 1070 aa7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 SWI5Q1ZZU3 235 aa7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 TMEM164Q5U3C3 297 aa7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 NPM2Q86SE8 214 aaKnown RBP7.79□□□□□ -1.16
HMGB1P45-201ENST00000435986 AVPP01185 164 aa7.78□□□□□ -1.16
HMGB1P45-201ENST00000435986 SMPD1P17405 629 aa7.78□□□□□ -1.16
HMGB1P45-201ENST00000435986 CRTC2Q53ET0 693 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P45-201ENST00000435986 PCDHB11Q9Y5F2 797 aa7.78□□□□□ -1.16
HMGB1P45-201ENST00000435986 TTC24A2A3L6 582 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 ARID4AP29374 1257 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 GTF2IP78347 998 aa7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 VASH1Q7L8A9 365 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 EHBP1Q8NDI1 1231 aa7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 STK32AQ8WU08 396 aa7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 ZNF594Q96JF6 807 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 C1QTNF2Q9BXJ5 285 aa7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 DACH1Q9UI36 760 aa7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 ZMIZ1Q9ULJ6 1067 aa7.77□□□□□ -1.17
HMGB1P45-201ENST00000435986 J3QL48 77 aa7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 SEC13P55735 322 aa7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 DHX9Q08211 1270 aaKnown RBP7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 DPYDQ12882 1025 aa7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 CLP1Q92989 425 aaKnown RBP7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 KCTD15Q96SI1 283 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 GNEQ9Y223 722 aaKnown RBP7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 MAP4K5Q9Y4K4 846 aa7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 IVNS1ABPQ9Y6Y0 642 aa7.76□□□□□ -1.17
HMGB1P45-201ENST00000435986 ESPNB1AK53 854 aa7.75□□□□□ -1.17
HMGB1P45-201ENST00000435986 MFAP1P55081 439 aaKnown RBP7.75□□□□□ -1.17
HMGB1P45-201ENST00000435986 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
HMGB1P45-201ENST00000435986 SIX5Q8N196 739 aa7.75□□□□□ -1.17
HMGB1P45-201ENST00000435986 CRIPAKQ8N1N5 446 aa7.75□□□□□ -1.17
HMGB1P45-201ENST00000435986 CCDC85AQ96PX6 553 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P45-201ENST00000435986 AAASQ9NRG9 546 aa7.75□□□□□ -1.17
HMGB1P45-201ENST00000435986 CCDC27Q2M243 656 aa7.74□□□□□ -1.17
HMGB1P45-201ENST00000435986 CCDC102BQ68D86 513 aa7.74□□□□□ -1.17
HMGB1P45-201ENST00000435986 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
HMGB1P45-201ENST00000435986 CARNS1A5YM72 827 aa7.73□□□□□ -1.17
HMGB1P45-201ENST00000435986 ATP2B4P23634 1241 aa7.73□□□□□ -1.17
HMGB1P45-201ENST00000435986 RAB15P59190 212 aa7.73□□□□□ -1.17
HMGB1P45-201ENST00000435986 ZNF787Q6DD87 383 aa7.73□□□□□ -1.17
HMGB1P45-201ENST00000435986 SND1Q7KZF4 910 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGB1P45-201ENST00000435986 TPCN2Q8NHX9 752 aa7.73□□□□□ -1.17
HMGB1P45-201ENST00000435986 ALDH1A1P00352 501 aa7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 SSFA2P28290 1259 aa7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 CLDN10P78369 228 aa7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 ARID5BQ14865 1188 aa7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 MPNDQ8N594 471 aa7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 HPS1Q92902 700 aa7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 HINFPQ9BQA5 517 aa7.72□□□□□ -1.17
HMGB1P45-201ENST00000435986 CTC1Q2NKJ3 1217 aa7.71□□□□□ -1.18
HMGB1P45-201ENST00000435986 BACH1O14867 736 aa7.7□□□□□ -1.18
HMGB1P45-201ENST00000435986 TSGA10IPQ3SY00 556 aa7.7□□□□□ -1.18
HMGB1P45-201ENST00000435986 C1orf216Q8TAB5 229 aa7.7□□□□□ -1.18
HMGB1P45-201ENST00000435986 M0R2N6 131 aa7.69□□□□□ -1.18
HMGB1P45-201ENST00000435986 ZBTB7BO15156 539 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P45-201ENST00000435986 CC2D2BQ6DHV5 1058 aa7.69□□□□□ -1.18
HMGB1P45-201ENST00000435986 CDK15Q96Q40 435 aa7.69□□□□□ -1.18
HMGB1P45-201ENST00000435986 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
HMGB1P45-201ENST00000435986 TXNDC2Q86VQ3 553 aa7.68□□□□□ -1.18
HMGB1P45-201ENST00000435986 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGB1P45-201ENST00000435986 PCDHGA11Q9Y5H2 935 aa7.68□□□□□ -1.18
HMGB1P45-201ENST00000435986 ERVH48-1M5A8F1 160 aa7.67□□□□□ -1.18
HMGB1P45-201ENST00000435986 AXIN1O15169 862 aa7.67□□□□□ -1.18
HMGB1P45-201ENST00000435986 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
HMGB1P45-201ENST00000435986 NR5A1Q13285 461 aa7.67□□□□□ -1.18
HMGB1P45-201ENST00000435986 ZNF775Q96BV0 537 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P45-201ENST00000435986 PGPEP1Q9NXJ5 209 aa7.67□□□□□ -1.18
HMGB1P45-201ENST00000435986 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
HMGB1P45-201ENST00000435986 SFI1A8K8P3 1242 aa7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 PTCD1O75127 700 aaKnown RBP7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 ADH1CP00326 375 aa7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 ERCC3P19447 782 aa7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 FSHRP23945 695 aa7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 ERVK-9P63128 1117 aa7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 ESCO1Q5FWF5 840 aa7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 CYP2U1Q7Z449 544 aa7.66□□□□□ -1.18
HMGB1P45-201ENST00000435986 PRMT3O60678 531 aa7.65□□□□□ -1.18
HMGB1P45-201ENST00000435986 NNTQ13423 1086 aa7.65□□□□□ -1.18
HMGB1P45-201ENST00000435986 CCDC116Q8IYX3 515 aa7.65□□□□□ -1.18
HMGB1P45-201ENST00000435986 RGS22Q8NE09 1264 aa7.65□□□□□ -1.18
HMGB1P45-201ENST00000435986 VTI1AQ96AJ9 217 aa7.65□□□□□ -1.18
HMGB1P45-201ENST00000435986 CXXC1Q9P0U4 656 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms