RNA–Protein interactions for RNA: ENST00000435489.6

NIPAL4-202, Transcript of NIPA like domain containing 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NIPAL4, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4-202ENST00000435489 TNS2Q63HR2 1409 aa27.39■■□□□ 1.97
NIPAL4-202ENST00000435489 WDR43Q15061 677 aaKnown RBP eCLIP27.38■■□□□ 1.97
NIPAL4-202ENST00000435489 MEGF6O75095 1541 aa27.37■■□□□ 1.97
NIPAL4-202ENST00000435489 TATP17735 454 aaPredicted RBP27.36■■□□□ 1.97
NIPAL4-202ENST00000435489 OVOS2A0A0G2JMS6 1433 aa27.36■■□□□ 1.97
NIPAL4-202ENST00000435489 NCAPD2Q15021 1401 aa27.36■■□□□ 1.97
NIPAL4-202ENST00000435489 IL13P35225 146 aa27.35■■□□□ 1.97
NIPAL4-202ENST00000435489 ZCRB1Q8TBF4 217 aaKnown RBP27.35■■□□□ 1.97
NIPAL4-202ENST00000435489 IGSF1Q8N6C5 1336 aa27.34■■□□□ 1.97
NIPAL4-202ENST00000435489 TRIM37O94972 964 aa27.34■■□□□ 1.97
NIPAL4-202ENST00000435489 SF3B2Q13435 895 aaKnown RBP27.34■■□□□ 1.97
NIPAL4-202ENST00000435489 DDX54Q8TDD1 881 aaKnown RBP27.33■■□□□ 1.97
NIPAL4-202ENST00000435489 ADAMTS8Q9UP79 889 aa27.31■■□□□ 1.96
NIPAL4-202ENST00000435489 DIAPH1O60610 1272 aaKnown RBP27.3■■□□□ 1.96
NIPAL4-202ENST00000435489 BCL9O00512 1426 aa27.29■■□□□ 1.96
NIPAL4-202ENST00000435489 HNRNPUQ00839 825 aaKnown RBP eCLIP27.29■■□□□ 1.96
NIPAL4-202ENST00000435489 NUDCQ9Y266 331 aa27.29■■□□□ 1.96
NIPAL4-202ENST00000435489 DEFB132Q7Z7B7 95 aa27.27■■□□□ 1.96
NIPAL4-202ENST00000435489 SULT6B1Q6IMI4 303 aa27.26■■□□□ 1.95
NIPAL4-202ENST00000435489 AEBP1Q8IUX7 1158 aa27.26■■□□□ 1.95
NIPAL4-202ENST00000435489 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
NIPAL4-202ENST00000435489 CENPBP07199 599 aaPredicted RBP27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 BAG6P46379 1132 aa27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 SPG7Q9UQ90 795 aa27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 APBA3O96018 575 aa27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 PTF1AQ7RTS3 328 aa27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 BCL11BQ9C0K0 894 aaPredicted RBP27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 PCDH11XQ9BZA7 1347 aa27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 PCDH11YQ9BZA8 1340 aa27.23■■□□□ 1.95
NIPAL4-202ENST00000435489 ACSBG1Q96GR2 724 aa27.22■■□□□ 1.95
NIPAL4-202ENST00000435489 KDRP35968 1356 aa27.22■■□□□ 1.95
NIPAL4-202ENST00000435489 RGPD1P0DJD0 1748 aa27.22■■□□□ 1.95
NIPAL4-202ENST00000435489 CYP27B1O15528 508 aa27.21■■□□□ 1.95
NIPAL4-202ENST00000435489 KCNQ2O43526 872 aa27.21■■□□□ 1.95
NIPAL4-202ENST00000435489 EN1Q05925 392 aaPredicted RBP27.2■■□□□ 1.95
NIPAL4-202ENST00000435489 SHANK3Q9BYB0 1731 aa27.2■■□□□ 1.94
NIPAL4-202ENST00000435489 U2SURPO15042 1029 aaKnown RBP27.19■■□□□ 1.94
NIPAL4-202ENST00000435489 HMOX1P09601 288 aa27.19■■□□□ 1.94
NIPAL4-202ENST00000435489 U2AF1L5P0DN76 240 aaPredicted RBP27.19■■□□□ 1.94
NIPAL4-202ENST00000435489 U2AF1Q01081 240 aaKnown RBP eCLIP27.19■■□□□ 1.94
NIPAL4-202ENST00000435489 SBF2Q86WG5 1849 aa27.19■■□□□ 1.94
NIPAL4-202ENST00000435489 PLEKHG2Q9H7P9 1386 aa27.18■■□□□ 1.94
NIPAL4-202ENST00000435489 TNS1Q9HBL0 1735 aaKnown RBP27.18■■□□□ 1.94
NIPAL4-202ENST00000435489 PLEKHO1Q53GL0 409 aaPredicted RBP27.16■■□□□ 1.94
NIPAL4-202ENST00000435489 PKD1L3Q7Z443 1732 aa27.16■■□□□ 1.94
NIPAL4-202ENST00000435489 AMOTQ4VCS5 1084 aa27.16■■□□□ 1.94
NIPAL4-202ENST00000435489 CAMKK2Q96RR4 588 aa27.15■■□□□ 1.94
NIPAL4-202ENST00000435489 ZBED9Q6R2W3 1325 aa27.14■■□□□ 1.94
NIPAL4-202ENST00000435489 IFNL2Q8IZJ0 200 aa27.14■■□□□ 1.94
NIPAL4-202ENST00000435489 PHKG2P15735 406 aa27.13■■□□□ 1.93
NIPAL4-202ENST00000435489 PRIM1P49642 420 aaKnown RBP27.13■■□□□ 1.93
NIPAL4-202ENST00000435489 NKX1-1Q15270 411 aaPredicted RBP27.13■■□□□ 1.93
NIPAL4-202ENST00000435489 EZH2Q15910 746 aaKnown RBP27.13■■□□□ 1.93
NIPAL4-202ENST00000435489 SYTL4Q96C24 671 aaPredicted RBP27.12■■□□□ 1.93
NIPAL4-202ENST00000435489 PLSCR1O15162 318 aa27.12■■□□□ 1.93
NIPAL4-202ENST00000435489 CCDC146Q8IYE0 955 aa27.12■■□□□ 1.93
NIPAL4-202ENST00000435489 RUNDC1Q96C34 613 aa27.12■■□□□ 1.93
NIPAL4-202ENST00000435489 PNNQ9H307 717 aaKnown RBP27.12■■□□□ 1.93
NIPAL4-202ENST00000435489 KAT6BQ8WYB5 2073 aa27.1■■□□□ 1.93
NIPAL4-202ENST00000435489 FCHSD2O94868 740 aa27.1■■□□□ 1.93
NIPAL4-202ENST00000435489 ZNF530Q6P9A1 599 aaPredicted RBP27.1■■□□□ 1.93
NIPAL4-202ENST00000435489 NHSQ6T4R5 1651 aa27.1■■□□□ 1.93
NIPAL4-202ENST00000435489 NGEFQ8N5V2 710 aa27.06■■□□□ 1.92
NIPAL4-202ENST00000435489 APAF1O14727 1248 aa27.05■■□□□ 1.92
NIPAL4-202ENST00000435489 C1orf141Q5JVX7 400 aa27.05■■□□□ 1.92
NIPAL4-202ENST00000435489 RSPH6AQ9H0K4 717 aa27.05■■□□□ 1.92
NIPAL4-202ENST00000435489 DOT1LQ8TEK3 1739 aa27.05■■□□□ 1.92
NIPAL4-202ENST00000435489 SENP3-EIF4A1A0A087X0R7 540 aa27.05■■□□□ 1.92
NIPAL4-202ENST00000435489 HSP90AB1P08238 724 aaKnown RBP27.05■■□□□ 1.92
NIPAL4-202ENST00000435489 MTHFSDQ2M296 383 aaKnown RBP27.04■■□□□ 1.92
NIPAL4-202ENST00000435489 PLEKHF1Q96S99 279 aa27.04■■□□□ 1.92
NIPAL4-202ENST00000435489 PRKAR2BP31323 418 aa27.03■■□□□ 1.92
NIPAL4-202ENST00000435489 MPRIPQ6WCQ1 1025 aa27.03■■□□□ 1.92
NIPAL4-202ENST00000435489 PROM2Q8N271 834 aa27.03■■□□□ 1.92
NIPAL4-202ENST00000435489 DCAF5Q96JK2 942 aa27.03■■□□□ 1.92
NIPAL4-202ENST00000435489 SALL2Q9Y467 1007 aaPredicted RBP27.01■■□□□ 1.92
NIPAL4-202ENST00000435489 BTAF1O14981 1849 aa27.01■■□□□ 1.91
NIPAL4-202ENST00000435489 MAPK8IP3Q9UPT6 1336 aa27.01■■□□□ 1.91
NIPAL4-202ENST00000435489 NEFMP07197 916 aa27.01■■□□□ 1.91
NIPAL4-202ENST00000435489 AKAP4Q5JQC9 854 aa27.01■■□□□ 1.91
NIPAL4-202ENST00000435489 TXNRD1Q16881 649 aa27■■□□□ 1.91
NIPAL4-202ENST00000435489 PHACTR3Q96KR7 559 aa27■■□□□ 1.91
NIPAL4-202ENST00000435489 NCBP3Q53F19 620 aaKnown RBP26.98■■□□□ 1.91
NIPAL4-202ENST00000435489 PIGBQ92521 554 aa26.98■■□□□ 1.91
NIPAL4-202ENST00000435489 TOGARAM1Q9Y4F4 1720 aa26.98■■□□□ 1.91
NIPAL4-202ENST00000435489 ERVV-2B6SEH9 535 aa26.98■■□□□ 1.91
NIPAL4-202ENST00000435489 TMOD3Q9NYL9 352 aa26.98■■□□□ 1.91
NIPAL4-202ENST00000435489 KDM6AO15550 1401 aaPredicted RBP26.96■■□□□ 1.91
NIPAL4-202ENST00000435489 RGPD3A6NKT7 1758 aaPredicted RBP26.96■■□□□ 1.91
NIPAL4-202ENST00000435489 RGPD4Q7Z3J3 1758 aa26.96■■□□□ 1.91
NIPAL4-202ENST00000435489 GAS2L2Q8NHY3 880 aa26.96■■□□□ 1.91
NIPAL4-202ENST00000435489 LGR6Q9HBX8 967 aa26.94■■□□□ 1.9
NIPAL4-202ENST00000435489 RREB1Q92766 1687 aa26.94■■□□□ 1.9
NIPAL4-202ENST00000435489 CABP4P57796 275 aa26.93■■□□□ 1.9
NIPAL4-202ENST00000435489 ITGB4P16144 1822 aa26.93■■□□□ 1.9
NIPAL4-202ENST00000435489 TMPOP42166 694 aaKnown RBP26.92■■□□□ 1.9
NIPAL4-202ENST00000435489 RRP7AQ9Y3A4 280 aaKnown RBP26.92■■□□□ 1.9
NIPAL4-202ENST00000435489 RNMTO43148 476 aaKnown RBP26.91■■□□□ 1.9
NIPAL4-202ENST00000435489 NEUROD2Q15784 382 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms