RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 MAP3K5Q99683 1374 aa19.68■□□□□ 0.74
TMEM40-204ENST00000435218 SHANK3Q9BYB0 1731 aa19.68■□□□□ 0.74
TMEM40-204ENST00000435218 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
TMEM40-204ENST00000435218 CARD10Q9BWT7 1032 aa19.68■□□□□ 0.74
TMEM40-204ENST00000435218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.74
TMEM40-204ENST00000435218 SPATA31A6Q5VVP1 1343 aa19.68■□□□□ 0.74
TMEM40-204ENST00000435218 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
TMEM40-204ENST00000435218 SIPA1L3O60292 1781 aaPredicted RBP19.67■□□□□ 0.74
TMEM40-204ENST00000435218 OVOS2A0A0G2JMS6 1433 aa19.67■□□□□ 0.74
TMEM40-204ENST00000435218 RAPGEF4Q8WZA2 1011 aa19.66■□□□□ 0.74
TMEM40-204ENST00000435218 BTG4Q9NY30 223 aa19.66■□□□□ 0.74
TMEM40-204ENST00000435218 SLIT2O94813 1529 aa19.66■□□□□ 0.74
TMEM40-204ENST00000435218 GNAT3A8MTJ3 354 aa19.66■□□□□ 0.74
TMEM40-204ENST00000435218 ZNF853P0CG23 659 aa19.66■□□□□ 0.74
TMEM40-204ENST00000435218 TOM1L2Q6ZVM7 507 aa19.66■□□□□ 0.74
TMEM40-204ENST00000435218 IFT57Q9NWB7 429 aa19.66■□□□□ 0.74
TMEM40-204ENST00000435218 RNF123Q5XPI4 1314 aa19.65■□□□□ 0.74
TMEM40-204ENST00000435218 TATP17735 454 aaPredicted RBP19.65■□□□□ 0.74
TMEM40-204ENST00000435218 GNAI1P63096 354 aa19.65■□□□□ 0.74
TMEM40-204ENST00000435218 EVA1CP58658 441 aa19.64■□□□□ 0.73
TMEM40-204ENST00000435218 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
TMEM40-204ENST00000435218 CFAP44Q96MT7 982 aa19.64■□□□□ 0.73
TMEM40-204ENST00000435218 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
TMEM40-204ENST00000435218 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
TMEM40-204ENST00000435218 AKAP4Q5JQC9 854 aa19.63■□□□□ 0.73
TMEM40-204ENST00000435218 LARP1Q6PKG0 1096 aaKnown RBP19.63■□□□□ 0.73
TMEM40-204ENST00000435218 SUPT16HQ9Y5B9 1047 aaKnown RBP19.63■□□□□ 0.73
TMEM40-204ENST00000435218 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
TMEM40-204ENST00000435218 KDM3BQ7LBC6 1761 aa19.63■□□□□ 0.73
TMEM40-204ENST00000435218 CT47B1P0C2W7 299 aaPredicted RBP19.62■□□□□ 0.73
TMEM40-204ENST00000435218 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
TMEM40-204ENST00000435218 LRP6O75581 1613 aa19.61■□□□□ 0.73
TMEM40-204ENST00000435218 HSPA1LP34931 641 aa19.61■□□□□ 0.73
TMEM40-204ENST00000435218 ZNF530Q6P9A1 599 aaPredicted RBP19.61■□□□□ 0.73
TMEM40-204ENST00000435218 STRN4Q9NRL3 753 aa19.61■□□□□ 0.73
TMEM40-204ENST00000435218 ADAMTS2O95450 1211 aa19.61■□□□□ 0.73
TMEM40-204ENST00000435218 DCTN1Q14203 1278 aa19.61■□□□□ 0.73
TMEM40-204ENST00000435218 MCM10Q7L590 875 aa19.61■□□□□ 0.73
TMEM40-204ENST00000435218 SPG7Q9UQ90 795 aa19.61■□□□□ 0.73
TMEM40-204ENST00000435218 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
TMEM40-204ENST00000435218 NUTM2BA6NNL0 878 aaPredicted RBP19.59■□□□□ 0.73
TMEM40-204ENST00000435218 NUTM2EB1AL46 878 aaPredicted RBP19.59■□□□□ 0.73
TMEM40-204ENST00000435218 NUTM2AQ8IVF1 878 aaPredicted RBP19.59■□□□□ 0.73
TMEM40-204ENST00000435218 TSR2Q969E8 191 aaKnown RBP19.59■□□□□ 0.73
TMEM40-204ENST00000435218 BABAM1Q9NWV8 329 aa19.59■□□□□ 0.73
TMEM40-204ENST00000435218 CHL1O00533 1208 aa19.58■□□□□ 0.73
TMEM40-204ENST00000435218 IL2RBP14784 551 aa19.58■□□□□ 0.73
TMEM40-204ENST00000435218 C1orf141Q5JVX7 400 aa19.58■□□□□ 0.73
TMEM40-204ENST00000435218 IL17REQ8NFR9 667 aa19.58■□□□□ 0.73
TMEM40-204ENST00000435218 MBIPQ9NS73 344 aa19.57■□□□□ 0.72
TMEM40-204ENST00000435218 CACNA1FO60840 1977 aa19.57■□□□□ 0.72
TMEM40-204ENST00000435218 GTF3C3Q9Y5Q9 886 aa19.56■□□□□ 0.72
TMEM40-204ENST00000435218 MRC1P22897 1456 aa19.56■□□□□ 0.72
TMEM40-204ENST00000435218 BCL9LQ86UU0 1499 aa19.55■□□□□ 0.72
TMEM40-204ENST00000435218 PHKG2P15735 406 aa19.55■□□□□ 0.72
TMEM40-204ENST00000435218 EXOSC9Q06265 439 aaKnown RBP19.55■□□□□ 0.72
TMEM40-204ENST00000435218 IFNL2Q8IZJ0 200 aa19.55■□□□□ 0.72
TMEM40-204ENST00000435218 ZNF428Q96B54 188 aa19.55■□□□□ 0.72
TMEM40-204ENST00000435218 THRAP3Q9Y2W1 955 aaKnown RBP19.55■□□□□ 0.72
TMEM40-204ENST00000435218 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
TMEM40-204ENST00000435218 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
TMEM40-204ENST00000435218 NEFLP07196 543 aa19.54■□□□□ 0.72
TMEM40-204ENST00000435218 FNBP4Q8N3X1 1017 aaPredicted RBP19.54■□□□□ 0.72
TMEM40-204ENST00000435218 SPATA31A1Q5TZJ5 1347 aa19.53■□□□□ 0.72
TMEM40-204ENST00000435218 KDM6AO15550 1401 aaPredicted RBP19.53■□□□□ 0.72
TMEM40-204ENST00000435218 RNMTO43148 476 aaKnown RBP19.53■□□□□ 0.72
TMEM40-204ENST00000435218 RRP1P56182 461 aaKnown RBP19.53■□□□□ 0.72
TMEM40-204ENST00000435218 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
TMEM40-204ENST00000435218 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.72
TMEM40-204ENST00000435218 ZCRB1Q8TBF4 217 aaKnown RBP19.52■□□□□ 0.72
TMEM40-204ENST00000435218 FBXO41Q8TF61 875 aa19.52■□□□□ 0.72
TMEM40-204ENST00000435218 CDCA7Q9BWT1 371 aaPredicted RBP19.52■□□□□ 0.72
TMEM40-204ENST00000435218 SPATA31A5Q5VU36 1347 aa19.52■□□□□ 0.71
TMEM40-204ENST00000435218 SPATA31A7Q8IWB4 1347 aa19.52■□□□□ 0.71
TMEM40-204ENST00000435218 CYP27B1O15528 508 aa19.51■□□□□ 0.71
TMEM40-204ENST00000435218 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
TMEM40-204ENST00000435218 UNC5CLQ8IV45 518 aa19.51■□□□□ 0.71
TMEM40-204ENST00000435218 LGR6Q9HBX8 967 aa19.51■□□□□ 0.71
TMEM40-204ENST00000435218 TOGARAM1Q9Y4F4 1720 aa19.5■□□□□ 0.71
TMEM40-204ENST00000435218 ITGB4P16144 1822 aa19.5■□□□□ 0.71
TMEM40-204ENST00000435218 RARSP54136 660 aaKnown RBP19.5■□□□□ 0.71
TMEM40-204ENST00000435218 MPRIPQ6WCQ1 1025 aa19.5■□□□□ 0.71
TMEM40-204ENST00000435218 DCAF5Q96JK2 942 aa19.5■□□□□ 0.71
TMEM40-204ENST00000435218 C8orf37Q96NL8 207 aa19.5■□□□□ 0.71
TMEM40-204ENST00000435218 TEFQ10587 303 aa19.49■□□□□ 0.71
TMEM40-204ENST00000435218 NKX1-1Q15270 411 aaPredicted RBP19.49■□□□□ 0.71
TMEM40-204ENST00000435218 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
TMEM40-204ENST00000435218 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
TMEM40-204ENST00000435218 TNS2Q63HR2 1409 aa19.49■□□□□ 0.71
TMEM40-204ENST00000435218 ERICH6BQ5W0A0 696 aa19.48■□□□□ 0.71
TMEM40-204ENST00000435218 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
TMEM40-204ENST00000435218 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
TMEM40-204ENST00000435218 SOS1Q07889 1333 aaPredicted RBP19.48■□□□□ 0.71
TMEM40-204ENST00000435218 PAPPAQ13219 1627 aa19.48■□□□□ 0.71
TMEM40-204ENST00000435218 VPS72Q15906 364 aa19.47■□□□□ 0.71
TMEM40-204ENST00000435218 ALDH1L2Q3SY69 923 aa19.47■□□□□ 0.71
TMEM40-204ENST00000435218 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
TMEM40-204ENST00000435218 UBR2Q8IWV8 1755 aa19.47■□□□□ 0.71
TMEM40-204ENST00000435218 VAMP4O75379 141 aa19.46■□□□□ 0.71
TMEM40-204ENST00000435218 TWISTNBQ3B726 338 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms