RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 MICALL1Q8N3F8 863 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
CCDC171-202ENST00000432954 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC171-202ENST00000432954 DDIT3P35638 169 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 TBC1D25Q3MII6 688 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 MFSD4BQ5TF39 518 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
CCDC171-202ENST00000432954 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
CCDC171-202ENST00000432954 GRIK3Q13003 919 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
CCDC171-202ENST00000432954 CCDC181Q5TID7 509 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 DRAXINQ8NBI3 349 aaPredicted RBP13□□□□□ -0.33
CCDC171-202ENST00000432954 ZNF397Q8NF99 534 aaPredicted RBP13□□□□□ -0.33
CCDC171-202ENST00000432954 SMAPO00193 183 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 IMPDH2P12268 514 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 TEX35Q5T0J7 233 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 AGAP3Q96P47 875 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 RCAN3Q9UKA8 241 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 BLOC1S6Q9UL45 172 aa13□□□□□ -0.33
CCDC171-202ENST00000432954 SGSM2O43147 1006 aa12.99□□□□□ -0.33
CCDC171-202ENST00000432954 RPS6KA3P51812 740 aa12.99□□□□□ -0.33
CCDC171-202ENST00000432954 TBC1D8BQ0IIM8 1120 aa12.99□□□□□ -0.33
CCDC171-202ENST00000432954 HSP90B2PQ58FF3 399 aa12.99□□□□□ -0.33
CCDC171-202ENST00000432954 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
CCDC171-202ENST00000432954 OATP04181 439 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 CCDC186Q7Z3E2 898 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 THOC1Q96FV9 657 aaKnown RBP12.98□□□□□ -0.33
CCDC171-202ENST00000432954 PSMD2Q13200 908 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 PUS10Q3MIT2 529 aaKnown RBP12.98□□□□□ -0.33
CCDC171-202ENST00000432954 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 RBM12BQ8IXT5 1001 aaKnown RBP12.98□□□□□ -0.33
CCDC171-202ENST00000432954 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 TBC1D32Q96NH3 1257 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 KIF2CQ99661 725 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 RBSNQ9H1K0 784 aa12.98□□□□□ -0.33
CCDC171-202ENST00000432954 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
CCDC171-202ENST00000432954 NEBLO76041 1014 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 ALDH1B1P30837 517 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
CCDC171-202ENST00000432954 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC171-202ENST00000432954 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 ERBB3P21860 1342 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 RBM47A0AV96 593 aaKnown RBP12.97□□□□□ -0.33
CCDC171-202ENST00000432954 CDKL5O76039 1030 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 NFXL1Q6ZNB6 911 aa12.97□□□□□ -0.33
CCDC171-202ENST00000432954 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
CCDC171-202ENST00000432954 A1CFQ9NQ94 594 aaKnown RBP12.97□□□□□ -0.33
CCDC171-202ENST00000432954 NUCB2P80303 420 aa12.96□□□□□ -0.33
CCDC171-202ENST00000432954 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
CCDC171-202ENST00000432954 ZNF483Q8TF39 744 aaPredicted RBP12.96□□□□□ -0.33
CCDC171-202ENST00000432954 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
CCDC171-202ENST00000432954 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
CCDC171-202ENST00000432954 HMGXB3Q12766 1538 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 GPS2Q13227 327 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 PDIA5Q14554 519 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 MCM6Q14566 821 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 CLEC17AQ6ZS10 378 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 CACTIN-AS1Q8N1I8 211 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 OGFOD1Q8N543 542 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.34
CCDC171-202ENST00000432954 CHMLP26374 656 aa12.95□□□□□ -0.34
CCDC171-202ENST00000432954 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
CCDC171-202ENST00000432954 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
CCDC171-202ENST00000432954 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
CCDC171-202ENST00000432954 CTTNBP2Q8WZ74 1663 aa12.94□□□□□ -0.34
CCDC171-202ENST00000432954 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
CCDC171-202ENST00000432954 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
CCDC171-202ENST00000432954 IQCGQ9H095 443 aaKnown RBP12.94□□□□□ -0.34
CCDC171-202ENST00000432954 SPATS2LQ9NUQ6 558 aaKnown RBP12.94□□□□□ -0.34
CCDC171-202ENST00000432954 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
CCDC171-202ENST00000432954 V9GYY5 206 aaPredicted RBP12.94□□□□□ -0.34
CCDC171-202ENST00000432954 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
CCDC171-202ENST00000432954 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
CCDC171-202ENST00000432954 CLIP1P30622 1438 aa12.94□□□□□ -0.34
CCDC171-202ENST00000432954 RAB3GAP1Q15042 981 aa12.94□□□□□ -0.34
CCDC171-202ENST00000432954 VPS8Q8N3P4 1428 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 PEX19P40855 299 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 NEK11Q8NG66 645 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
CCDC171-202ENST00000432954 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 ROCK2O75116 1388 aaKnown RBP12.93□□□□□ -0.34
CCDC171-202ENST00000432954 SNUPNO95149 360 aaKnown RBP12.93□□□□□ -0.34
CCDC171-202ENST00000432954 USP8P40818 1118 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
CCDC171-202ENST00000432954 CRACR2AQ9BSW2 395 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 GNL3LQ9NVN8 582 aaKnown RBP12.93□□□□□ -0.34
CCDC171-202ENST00000432954 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
CCDC171-202ENST00000432954 TMCO5BA8MYB1 307 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms