RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
HDLBP-211ENST00000425989 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
HDLBP-211ENST00000425989 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
HDLBP-211ENST00000425989 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-211ENST00000425989 WDR17Q8IZU2 1322 aa12.42□□□□□ -0.42
HDLBP-211ENST00000425989 FAM83GA6ND36 823 aa12.42□□□□□ -0.42
HDLBP-211ENST00000425989 CHL1O00533 1208 aa12.42□□□□□ -0.42
HDLBP-211ENST00000425989 MS4A1P11836 297 aa12.42□□□□□ -0.42
HDLBP-211ENST00000425989 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
HDLBP-211ENST00000425989 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
HDLBP-211ENST00000425989 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
HDLBP-211ENST00000425989 FKBP8Q14318 412 aa12.41□□□□□ -0.42
HDLBP-211ENST00000425989 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
HDLBP-211ENST00000425989 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-211ENST00000425989 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
HDLBP-211ENST00000425989 PIP4K2BP78356 416 aa12.4□□□□□ -0.42
HDLBP-211ENST00000425989 TAF7Q15545 349 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-211ENST00000425989 CHRNA2Q15822 529 aa12.4□□□□□ -0.42
HDLBP-211ENST00000425989 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
HDLBP-211ENST00000425989 RGPD2P0DJD1 1756 aa12.4□□□□□ -0.42
HDLBP-211ENST00000425989 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
HDLBP-211ENST00000425989 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
HDLBP-211ENST00000425989 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
HDLBP-211ENST00000425989 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
HDLBP-211ENST00000425989 COL14A1Q05707 1796 aaKnown RBP12.38□□□□□ -0.43
HDLBP-211ENST00000425989 ABCA3Q99758 1704 aa12.38□□□□□ -0.43
HDLBP-211ENST00000425989 IPO8O15397 1037 aaKnown RBP12.38□□□□□ -0.43
HDLBP-211ENST00000425989 RARSP54136 660 aaKnown RBP12.38□□□□□ -0.43
HDLBP-211ENST00000425989 EXOSC9Q06265 439 aaKnown RBP12.38□□□□□ -0.43
HDLBP-211ENST00000425989 AAMPQ13685 434 aa12.38□□□□□ -0.43
HDLBP-211ENST00000425989 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
HDLBP-211ENST00000425989 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
HDLBP-211ENST00000425989 CDCA7Q9BWT1 371 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-211ENST00000425989 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
HDLBP-211ENST00000425989 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
HDLBP-211ENST00000425989 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-211ENST00000425989 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-211ENST00000425989 USHBP1Q8N6Y0 703 aa12.37□□□□□ -0.43
HDLBP-211ENST00000425989 IL17REQ8NFR9 667 aa12.37□□□□□ -0.43
HDLBP-211ENST00000425989 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
HDLBP-211ENST00000425989 JCADQ9P266 1359 aa12.37□□□□□ -0.43
HDLBP-211ENST00000425989 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
HDLBP-211ENST00000425989 CEMIPQ8WUJ3 1361 aa12.36□□□□□ -0.43
HDLBP-211ENST00000425989 VAMP4O75379 141 aa12.36□□□□□ -0.43
HDLBP-211ENST00000425989 MCM10Q7L590 875 aa12.36□□□□□ -0.43
HDLBP-211ENST00000425989 MBIPQ9NS73 344 aa12.36□□□□□ -0.43
HDLBP-211ENST00000425989 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
HDLBP-211ENST00000425989 CRB1P82279 1406 aa12.36□□□□□ -0.43
HDLBP-211ENST00000425989 COL5A2P05997 1499 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-211ENST00000425989 IL2RBP14784 551 aa12.35□□□□□ -0.43
HDLBP-211ENST00000425989 TEFQ10587 303 aa12.35□□□□□ -0.43
HDLBP-211ENST00000425989 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
HDLBP-211ENST00000425989 ZCRB1Q8TBF4 217 aaKnown RBP12.35□□□□□ -0.43
HDLBP-211ENST00000425989 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
HDLBP-211ENST00000425989 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
HDLBP-211ENST00000425989 CACNA1FO60840 1977 aa12.35□□□□□ -0.43
HDLBP-211ENST00000425989 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
HDLBP-211ENST00000425989 TSR2Q969E8 191 aaKnown RBP12.34□□□□□ -0.43
HDLBP-211ENST00000425989 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
HDLBP-211ENST00000425989 TSPYL4Q9UJ04 414 aa12.34□□□□□ -0.43
HDLBP-211ENST00000425989 HOXB7P09629 217 aa12.33□□□□□ -0.44
HDLBP-211ENST00000425989 PHKG2P15735 406 aa12.33□□□□□ -0.44
HDLBP-211ENST00000425989 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-211ENST00000425989 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-211ENST00000425989 THUMPD2Q9BTF0 503 aaKnown RBP12.33□□□□□ -0.44
HDLBP-211ENST00000425989 CHMP4BQ9H444 224 aaKnown RBP12.33□□□□□ -0.44
HDLBP-211ENST00000425989 STRN4Q9NRL3 753 aa12.33□□□□□ -0.44
HDLBP-211ENST00000425989 ZKSCAN2Q63HK3 967 aa12.32□□□□□ -0.44
HDLBP-211ENST00000425989 LARP1Q6PKG0 1096 aaKnown RBP12.32□□□□□ -0.44
HDLBP-211ENST00000425989 KIF16BQ96L93 1317 aa12.32□□□□□ -0.44
HDLBP-211ENST00000425989 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
HDLBP-211ENST00000425989 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
HDLBP-211ENST00000425989 ERVV-2B6SEH9 535 aa12.31□□□□□ -0.44
HDLBP-211ENST00000425989 BCAR3O75815 825 aa12.31□□□□□ -0.44
HDLBP-211ENST00000425989 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
HDLBP-211ENST00000425989 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
HDLBP-211ENST00000425989 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
HDLBP-211ENST00000425989 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
HDLBP-211ENST00000425989 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
HDLBP-211ENST00000425989 EXOC5O00471 708 aa12.3□□□□□ -0.44
HDLBP-211ENST00000425989 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
HDLBP-211ENST00000425989 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
HDLBP-211ENST00000425989 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
HDLBP-211ENST00000425989 PKD1L3Q7Z443 1732 aa12.29□□□□□ -0.44
HDLBP-211ENST00000425989 NUTM2BA6NNL0 878 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-211ENST00000425989 NUTM2EB1AL46 878 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-211ENST00000425989 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
HDLBP-211ENST00000425989 NUTM2AQ8IVF1 878 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-211ENST00000425989 FNBP4Q8N3X1 1017 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-211ENST00000425989 C8orf58Q8NAV2 365 aa12.29□□□□□ -0.44
HDLBP-211ENST00000425989 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
HDLBP-211ENST00000425989 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
HDLBP-211ENST00000425989 ADAMTS7Q9UKP4 1686 aa12.29□□□□□ -0.44
HDLBP-211ENST00000425989 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
HDLBP-211ENST00000425989 ADAMTS2O95450 1211 aa12.28□□□□□ -0.44
HDLBP-211ENST00000425989 BARGINQ6ZT62 677 aa12.28□□□□□ -0.44
HDLBP-211ENST00000425989 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
HDLBP-211ENST00000425989 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
HDLBP-211ENST00000425989 SLC52A2Q9HAB3 445 aa12.28□□□□□ -0.44
HDLBP-211ENST00000425989 LRRC37A3O60309 1634 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms