RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 C1QTNF8P60827 252 aa17.1■□□□□ 0.33
HLA-DQB3-203ENST00000425319 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB3-203ENST00000425319 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
HLA-DQB3-203ENST00000425319 NHSQ6T4R5 1651 aa17.08■□□□□ 0.32
HLA-DQB3-203ENST00000425319 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
HLA-DQB3-203ENST00000425319 PNPLA7Q6ZV29 1317 aa17.08■□□□□ 0.32
HLA-DQB3-203ENST00000425319 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB3-203ENST00000425319 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
HLA-DQB3-203ENST00000425319 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
HLA-DQB3-203ENST00000425319 MON2Q7Z3U7 1717 aa17.06■□□□□ 0.32
HLA-DQB3-203ENST00000425319 PCDH11XQ9BZA7 1347 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 PCDH11YQ9BZA8 1340 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 MYOM1P52179 1685 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 FYB1O15117 783 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 KCNQ4P56696 695 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 RRS1Q15050 365 aaKnown RBP17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 TESK2Q96S53 571 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
HLA-DQB3-203ENST00000425319 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
HLA-DQB3-203ENST00000425319 FBLN1P23142 703 aa17.03■□□□□ 0.32
HLA-DQB3-203ENST00000425319 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
HLA-DQB3-203ENST00000425319 COL23A1Q86Y22 540 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB3-203ENST00000425319 AK7Q96M32 723 aa17.03■□□□□ 0.32
HLA-DQB3-203ENST00000425319 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
HLA-DQB3-203ENST00000425319 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.32
HLA-DQB3-203ENST00000425319 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB3-203ENST00000425319 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
HLA-DQB3-203ENST00000425319 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
HLA-DQB3-203ENST00000425319 USP54Q70EL1 1684 aa17■□□□□ 0.31
HLA-DQB3-203ENST00000425319 LTN1O94822 1766 aa17■□□□□ 0.31
HLA-DQB3-203ENST00000425319 BTAF1O14981 1849 aa16.99■□□□□ 0.31
HLA-DQB3-203ENST00000425319 HSP90AB2PQ58FF8 381 aa16.99■□□□□ 0.31
HLA-DQB3-203ENST00000425319 NLGN2Q8NFZ4 835 aa16.99■□□□□ 0.31
HLA-DQB3-203ENST00000425319 INSRP06213 1382 aa16.99■□□□□ 0.31
HLA-DQB3-203ENST00000425319 MSL1Q68DK7 614 aa16.98■□□□□ 0.31
HLA-DQB3-203ENST00000425319 FLT4P35916 1363 aa16.98■□□□□ 0.31
HLA-DQB3-203ENST00000425319 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB3-203ENST00000425319 NSD3Q9BZ95 1437 aa16.97■□□□□ 0.31
HLA-DQB3-203ENST00000425319 GPBP1L1Q9HC44 474 aaPredicted RBP16.96■□□□□ 0.31
HLA-DQB3-203ENST00000425319 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
HLA-DQB3-203ENST00000425319 TMOD3Q9NYL9 352 aa16.95■□□□□ 0.3
HLA-DQB3-203ENST00000425319 PAPPAQ13219 1627 aa16.95■□□□□ 0.3
HLA-DQB3-203ENST00000425319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.3
HLA-DQB3-203ENST00000425319 NSD2O96028 1365 aa16.93■□□□□ 0.3
HLA-DQB3-203ENST00000425319 MEGF6O75095 1541 aa16.93■□□□□ 0.3
HLA-DQB3-203ENST00000425319 PHF14O94880 888 aa16.93■□□□□ 0.3
HLA-DQB3-203ENST00000425319 SSFA2P28290 1259 aa16.93■□□□□ 0.3
HLA-DQB3-203ENST00000425319 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
HLA-DQB3-203ENST00000425319 TIMELESSQ9UNS1 1208 aa16.93■□□□□ 0.3
HLA-DQB3-203ENST00000425319 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.3
HLA-DQB3-203ENST00000425319 CYP27B1O15528 508 aa16.91■□□□□ 0.3
HLA-DQB3-203ENST00000425319 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB3-203ENST00000425319 PIGBQ92521 554 aa16.91■□□□□ 0.3
HLA-DQB3-203ENST00000425319 CHD4Q14839 1912 aa16.91■□□□□ 0.3
HLA-DQB3-203ENST00000425319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB3-203ENST00000425319 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
HLA-DQB3-203ENST00000425319 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB3-203ENST00000425319 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
HLA-DQB3-203ENST00000425319 SIK1P57059 783 aa16.9■□□□□ 0.3
HLA-DQB3-203ENST00000425319 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
HLA-DQB3-203ENST00000425319 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB3-203ENST00000425319 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
HLA-DQB3-203ENST00000425319 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
HLA-DQB3-203ENST00000425319 TRAPPC3LQ5T215 181 aa16.88■□□□□ 0.29
HLA-DQB3-203ENST00000425319 NLGN1Q8N2Q7 840 aa16.88■□□□□ 0.29
HLA-DQB3-203ENST00000425319 GNPATO15228 680 aa16.87■□□□□ 0.29
HLA-DQB3-203ENST00000425319 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB3-203ENST00000425319 QSER1Q2KHR3 1735 aa16.87■□□□□ 0.29
HLA-DQB3-203ENST00000425319 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB3-203ENST00000425319 EYA1Q99502 592 aa16.86■□□□□ 0.29
HLA-DQB3-203ENST00000425319 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB3-203ENST00000425319 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
HLA-DQB3-203ENST00000425319 IGSF1Q8N6C5 1336 aa16.85■□□□□ 0.29
HLA-DQB3-203ENST00000425319 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
HLA-DQB3-203ENST00000425319 PHKG2P15735 406 aa16.84■□□□□ 0.29
HLA-DQB3-203ENST00000425319 TGFB2P61812 414 aa16.84■□□□□ 0.29
HLA-DQB3-203ENST00000425319 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB3-203ENST00000425319 ERVV-2B6SEH9 535 aa16.83■□□□□ 0.28
HLA-DQB3-203ENST00000425319 LY75O60449 1722 aa16.83■□□□□ 0.28
HLA-DQB3-203ENST00000425319 RFC4P35249 363 aa16.83■□□□□ 0.28
HLA-DQB3-203ENST00000425319 AMOTQ4VCS5 1084 aa16.83■□□□□ 0.28
HLA-DQB3-203ENST00000425319 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
HLA-DQB3-203ENST00000425319 ADRA2BP18089 450 aa16.82■□□□□ 0.28
HLA-DQB3-203ENST00000425319 CABP4P57796 275 aa16.82■□□□□ 0.28
HLA-DQB3-203ENST00000425319 CCDC87Q9NVE4 849 aa16.82■□□□□ 0.28
HLA-DQB3-203ENST00000425319 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
HLA-DQB3-203ENST00000425319 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
HLA-DQB3-203ENST00000425319 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
HLA-DQB3-203ENST00000425319 MMP10P09238 476 aa16.81■□□□□ 0.28
HLA-DQB3-203ENST00000425319 HSPA6P17066 643 aa16.81■□□□□ 0.28
HLA-DQB3-203ENST00000425319 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
HLA-DQB3-203ENST00000425319 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
HLA-DQB3-203ENST00000425319 LINC00116Q8NCU8 138 aa16.81■□□□□ 0.28
HLA-DQB3-203ENST00000425319 DCAF5Q96JK2 942 aa16.81■□□□□ 0.28
HLA-DQB3-203ENST00000425319 RC3H1Q5TC82 1133 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB3-203ENST00000425319 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
HLA-DQB3-203ENST00000425319 ATG3Q9NT62 314 aa16.8■□□□□ 0.28
HLA-DQB3-203ENST00000425319 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms