RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FAM181BA6NEQ2 426 aa6.09□□□□□ -1.43
SF3B1-205ENST00000424674 FOXD4L5Q5VV16 416 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-205ENST00000424674 CCDC155Q8N6L0 562 aa6.09□□□□□ -1.43
SF3B1-205ENST00000424674 KDF1Q8NAX2 398 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-205ENST00000424674 SLC35F4A4IF30 521 aa6.08□□□□□ -1.44
SF3B1-205ENST00000424674 ATP5J2-PTCD1G3V325 749 aa6.08□□□□□ -1.44
SF3B1-205ENST00000424674 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-205ENST00000424674 ERVK-9P63128 1117 aa6.08□□□□□ -1.44
SF3B1-205ENST00000424674 CC2D2BQ6DHV5 1058 aa6.08□□□□□ -1.44
SF3B1-205ENST00000424674 TBC1D2BQ9UPU7 963 aa6.08□□□□□ -1.44
SF3B1-205ENST00000424674 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
SF3B1-205ENST00000424674 PRM3Q9NNZ6 103 aa6.07□□□□□ -1.44
SF3B1-205ENST00000424674 PCDHB11Q9Y5F2 797 aa6.07□□□□□ -1.44
SF3B1-205ENST00000424674 ITGA6P23229 1130 aa6.06□□□□□ -1.44
SF3B1-205ENST00000424674 LYSMD3Q7Z3D4 306 aa6.06□□□□□ -1.44
SF3B1-205ENST00000424674 CYP2U1Q7Z449 544 aa6.06□□□□□ -1.44
SF3B1-205ENST00000424674 NANOS1Q8WY41 292 aaKnown RBP6.06□□□□□ -1.44
SF3B1-205ENST00000424674 MEN1O00255 615 aa6.05□□□□□ -1.44
SF3B1-205ENST00000424674 SCTRP47872 440 aa6.05□□□□□ -1.44
SF3B1-205ENST00000424674 RNF144AP50876 292 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-205ENST00000424674 SENP3-EIF4A1A0A087X0R7 540 aa6.04□□□□□ -1.44
SF3B1-205ENST00000424674 CDC14CA4D256 554 aa6.04□□□□□ -1.44
SF3B1-205ENST00000424674 GPC1P35052 558 aa6.04□□□□□ -1.44
SF3B1-205ENST00000424674 GPR161Q8N6U8 529 aaKnown RBP6.04□□□□□ -1.44
SF3B1-205ENST00000424674 A0A1W2PRU2 124 aa6.03□□□□□ -1.44
SF3B1-205ENST00000424674 ZBTB7CA1YPR0 619 aa6.03□□□□□ -1.44
SF3B1-205ENST00000424674 EIF4G2P78344 907 aaKnown RBP eCLIP6.03□□□□□ -1.44
SF3B1-205ENST00000424674 OSBPL3Q9H4L5 887 aa6.03□□□□□ -1.44
SF3B1-205ENST00000424674 ESF1Q9H501 851 aaKnown RBP6.03□□□□□ -1.44
SF3B1-205ENST00000424674 TRAK2O60296 914 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 RHOQP17081 205 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 KRT76Q01546 638 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 CLN3Q13286 438 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 IRF5Q13568 498 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 SV2AQ7L0J3 742 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 PRICKLE2Q7Z3G6 844 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 VWA5B2Q8N398 1253 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 CNTNAP3BQ96NU0 1288 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 NLRP3Q96P20 1036 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 CCDC85AQ96PX6 553 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-205ENST00000424674 COL25A1Q9BXS0 654 aaPredicted RBP6.02□□□□□ -1.45
SF3B1-205ENST00000424674 CNTNAP3Q9BZ76 1288 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 ARHGEF10LQ9HCE6 1279 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 CEP126Q9P2H0 1117 aa6.02□□□□□ -1.45
SF3B1-205ENST00000424674 MYCP01106 439 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-205ENST00000424674 MCM6Q14566 821 aa6.01□□□□□ -1.45
SF3B1-205ENST00000424674 SLC27A3Q5K4L6 730 aa6.01□□□□□ -1.45
SF3B1-205ENST00000424674 GDPD2Q9HCC8 539 aa6.01□□□□□ -1.45
SF3B1-205ENST00000424674 ABL2P42684 1182 aa6□□□□□ -1.45
SF3B1-205ENST00000424674 RAB6BQ9NRW1 208 aa6□□□□□ -1.45
SF3B1-205ENST00000424674 GNRH1P01148 92 aa5.99□□□□□ -1.45
SF3B1-205ENST00000424674 VAC14Q08AM6 782 aa5.99□□□□□ -1.45
SF3B1-205ENST00000424674 SLFNL1Q499Z3 407 aa5.99□□□□□ -1.45
SF3B1-205ENST00000424674 RNFT1Q5M7Z0 435 aa5.99□□□□□ -1.45
SF3B1-205ENST00000424674 CDCA7Q9BWT1 371 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-205ENST00000424674 CUEDC1Q9NWM3 386 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-205ENST00000424674 DOLKQ9UPQ8 538 aa5.99□□□□□ -1.45
SF3B1-205ENST00000424674 SPATA31C2B4DYI2 1134 aa5.98□□□□□ -1.45
SF3B1-205ENST00000424674 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
SF3B1-205ENST00000424674 RNF135Q8IUD6 432 aa5.98□□□□□ -1.45
SF3B1-205ENST00000424674 ZNF837Q96EG3 531 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-205ENST00000424674 GRIP2Q9C0E4 1043 aa5.98□□□□□ -1.45
SF3B1-205ENST00000424674 ZMYND15Q9H091 742 aa5.98□□□□□ -1.45
SF3B1-205ENST00000424674 DYRK1BQ9Y463 629 aa5.98□□□□□ -1.45
SF3B1-205ENST00000424674 EIF5BO60841 1220 aaKnown RBP5.97□□□□□ -1.45
SF3B1-205ENST00000424674 IL2RAP01589 272 aa5.97□□□□□ -1.45
SF3B1-205ENST00000424674 POU4F2Q12837 409 aa5.97□□□□□ -1.45
SF3B1-205ENST00000424674 NBPF10Q6P3W6 841 aaKnown RBP5.97□□□□□ -1.45
SF3B1-205ENST00000424674 PHTF2Q8N3S3 785 aa5.97□□□□□ -1.45
SF3B1-205ENST00000424674 NBPF15Q8N660 670 aa5.97□□□□□ -1.45
SF3B1-205ENST00000424674 CNKSR1Q969H4 720 aa5.97□□□□□ -1.45
SF3B1-205ENST00000424674 GMCL1Q96IK5 515 aa5.97□□□□□ -1.45
SF3B1-205ENST00000424674 ESYT1Q9BSJ8 1104 aa5.97□□□□□ -1.45
SF3B1-205ENST00000424674 OXLD1Q5BKU9 147 aa5.96□□□□□ -1.46
SF3B1-205ENST00000424674 WDR44Q5JSH3 913 aa5.96□□□□□ -1.46
SF3B1-205ENST00000424674 RIPOR1Q6ZS17 1223 aa5.96□□□□□ -1.46
SF3B1-205ENST00000424674 TAS1R3Q7RTX0 852 aa5.96□□□□□ -1.46
SF3B1-205ENST00000424674 TRIM22Q8IYM9 498 aa5.96□□□□□ -1.46
SF3B1-205ENST00000424674 WASLO00401 505 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-205ENST00000424674 HMGB1P09429 215 aaKnown RBP5.95□□□□□ -1.46
SF3B1-205ENST00000424674 SLURP2P0DP57 97 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 PDIA4P13667 645 aaKnown RBP5.95□□□□□ -1.46
SF3B1-205ENST00000424674 SOX11P35716 441 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 USP4Q13107 963 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 TSGA10IPQ3SY00 556 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 ESCO1Q5FWF5 840 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 ZNF385CQ66K41 422 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-205ENST00000424674 SVOPQ8N4V2 548 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 SIRT1Q96EB6 747 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 GAS2L1Q99501 681 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-205ENST00000424674 CHIC2Q9UKJ5 165 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 COG6Q9Y2V7 657 aa5.95□□□□□ -1.46
SF3B1-205ENST00000424674 H7C1W4 665 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 GTF2E1P29083 439 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-205ENST00000424674 CENPCQ03188 943 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 SEMA3FQ13275 785 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 GAS6Q14393 721 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 DBN1Q16643 649 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 FOXR1Q6PIV2 292 aa5.94□□□□□ -1.46
SF3B1-205ENST00000424674 ZSCAN10Q96SZ4 725 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms