RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 DDB1Q16531 1140 aa13.64□□□□□ -0.23
NCSTN-204ENST00000424645 PNNQ9H307 717 aaKnown RBP13.64□□□□□ -0.23
NCSTN-204ENST00000424645 KDRP35968 1356 aa13.63□□□□□ -0.23
NCSTN-204ENST00000424645 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
NCSTN-204ENST00000424645 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
NCSTN-204ENST00000424645 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
NCSTN-204ENST00000424645 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
NCSTN-204ENST00000424645 A0A0G2JS52 829 aa13.62□□□□□ -0.23
NCSTN-204ENST00000424645 MYT1Q01538 1121 aa13.62□□□□□ -0.23
NCSTN-204ENST00000424645 AMOTQ4VCS5 1084 aa13.62□□□□□ -0.23
NCSTN-204ENST00000424645 KRT27Q7Z3Y8 459 aa13.62□□□□□ -0.23
NCSTN-204ENST00000424645 RGS12O14924 1447 aa13.62□□□□□ -0.23
NCSTN-204ENST00000424645 FCHSD2O94868 740 aa13.61□□□□□ -0.23
NCSTN-204ENST00000424645 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
NCSTN-204ENST00000424645 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
NCSTN-204ENST00000424645 OVOS2A0A0G2JMS6 1433 aa13.6□□□□□ -0.23
NCSTN-204ENST00000424645 BCL9O00512 1426 aa13.6□□□□□ -0.23
NCSTN-204ENST00000424645 SULT6B1Q6IMI4 303 aa13.6□□□□□ -0.23
NCSTN-204ENST00000424645 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
NCSTN-204ENST00000424645 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
NCSTN-204ENST00000424645 TNS2Q63HR2 1409 aa13.59□□□□□ -0.23
NCSTN-204ENST00000424645 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
NCSTN-204ENST00000424645 DSG3P32926 999 aa13.59□□□□□ -0.23
NCSTN-204ENST00000424645 PLEKHO1Q53GL0 409 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-204ENST00000424645 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
NCSTN-204ENST00000424645 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
NCSTN-204ENST00000424645 NEFMP07197 916 aa13.58□□□□□ -0.24
NCSTN-204ENST00000424645 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
NCSTN-204ENST00000424645 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.24
NCSTN-204ENST00000424645 DIEXFQ68CQ4 756 aaKnown RBP13.58□□□□□ -0.24
NCSTN-204ENST00000424645 CCDC125Q86Z20 511 aa13.58□□□□□ -0.24
NCSTN-204ENST00000424645 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
NCSTN-204ENST00000424645 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
NCSTN-204ENST00000424645 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
NCSTN-204ENST00000424645 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
NCSTN-204ENST00000424645 MEGF6O75095 1541 aa13.56□□□□□ -0.24
NCSTN-204ENST00000424645 HSP90AB1P08238 724 aaKnown RBP13.56□□□□□ -0.24
NCSTN-204ENST00000424645 WDR43Q15061 677 aaKnown RBP eCLIP13.56□□□□□ -0.24
NCSTN-204ENST00000424645 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
NCSTN-204ENST00000424645 LRRC37A3O60309 1634 aa13.55□□□□□ -0.24
NCSTN-204ENST00000424645 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
NCSTN-204ENST00000424645 IFNL2Q8IZJ0 200 aa13.55□□□□□ -0.24
NCSTN-204ENST00000424645 HMOX1P09601 288 aa13.54□□□□□ -0.24
NCSTN-204ENST00000424645 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
NCSTN-204ENST00000424645 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
NCSTN-204ENST00000424645 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
NCSTN-204ENST00000424645 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
NCSTN-204ENST00000424645 RSPH6AQ9H0K4 717 aa13.54□□□□□ -0.24
NCSTN-204ENST00000424645 ILDR2Q71H61 639 aa13.53□□□□□ -0.24
NCSTN-204ENST00000424645 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.25
NCSTN-204ENST00000424645 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.25
NCSTN-204ENST00000424645 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
NCSTN-204ENST00000424645 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
NCSTN-204ENST00000424645 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
NCSTN-204ENST00000424645 PHKG2P15735 406 aa13.51□□□□□ -0.25
NCSTN-204ENST00000424645 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
NCSTN-204ENST00000424645 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
NCSTN-204ENST00000424645 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
NCSTN-204ENST00000424645 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
NCSTN-204ENST00000424645 CYP27B1O15528 508 aa13.5□□□□□ -0.25
NCSTN-204ENST00000424645 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
NCSTN-204ENST00000424645 HMGB2P26583 209 aaKnown RBP13.5□□□□□ -0.25
NCSTN-204ENST00000424645 PNISRQ8TF01 805 aaKnown RBP13.5□□□□□ -0.25
NCSTN-204ENST00000424645 PLEKHF1Q96S99 279 aa13.5□□□□□ -0.25
NCSTN-204ENST00000424645 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
NCSTN-204ENST00000424645 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
NCSTN-204ENST00000424645 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
NCSTN-204ENST00000424645 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
NCSTN-204ENST00000424645 ADAMTS8Q9UP79 889 aa13.49□□□□□ -0.25
NCSTN-204ENST00000424645 ABCB7O75027 752 aa13.48□□□□□ -0.25
NCSTN-204ENST00000424645 SF3B2Q13435 895 aaKnown RBP13.48□□□□□ -0.25
NCSTN-204ENST00000424645 MTHFSDQ2M296 383 aaKnown RBP13.48□□□□□ -0.25
NCSTN-204ENST00000424645 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
NCSTN-204ENST00000424645 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
NCSTN-204ENST00000424645 SOCS7O14512 581 aa13.46□□□□□ -0.25
NCSTN-204ENST00000424645 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
NCSTN-204ENST00000424645 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
NCSTN-204ENST00000424645 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
NCSTN-204ENST00000424645 PHACTR3Q96KR7 559 aa13.46□□□□□ -0.25
NCSTN-204ENST00000424645 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
NCSTN-204ENST00000424645 PLSCR1O15162 318 aa13.45□□□□□ -0.26
NCSTN-204ENST00000424645 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
NCSTN-204ENST00000424645 RTF1Q92541 710 aaKnown RBP13.45□□□□□ -0.26
NCSTN-204ENST00000424645 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
NCSTN-204ENST00000424645 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
NCSTN-204ENST00000424645 FAM182BQ5T319 152 aa13.44□□□□□ -0.26
NCSTN-204ENST00000424645 TRIM37O94972 964 aa13.43□□□□□ -0.26
NCSTN-204ENST00000424645 BAG6P46379 1132 aa13.43□□□□□ -0.26
NCSTN-204ENST00000424645 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
NCSTN-204ENST00000424645 RNMTO43148 476 aaKnown RBP13.42□□□□□ -0.26
NCSTN-204ENST00000424645 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
NCSTN-204ENST00000424645 CABP4P57796 275 aa13.42□□□□□ -0.26
NCSTN-204ENST00000424645 MIER1Q8N108 512 aa13.42□□□□□ -0.26
NCSTN-204ENST00000424645 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
NCSTN-204ENST00000424645 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
NCSTN-204ENST00000424645 NHSQ6T4R5 1651 aa13.41□□□□□ -0.26
NCSTN-204ENST00000424645 APBA3O96018 575 aa13.41□□□□□ -0.26
NCSTN-204ENST00000424645 MPRIPQ6WCQ1 1025 aa13.41□□□□□ -0.26
NCSTN-204ENST00000424645 CEMIPQ8WUJ3 1361 aa13.41□□□□□ -0.26
NCSTN-204ENST00000424645 KCNQ2O43526 872 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms