RNA–Protein interactions for RNA: ENST00000424320.5

SGIP1-205, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-205ENST00000424320 RAPGEF6Q8TEU7 1601 aa11.46□□□□□ -0.58
SGIP1-205ENST00000424320 SAMD9Q5K651 1589 aa11.45□□□□□ -0.58
SGIP1-205ENST00000424320 ATP10BO94823 1461 aa11.45□□□□□ -0.58
SGIP1-205ENST00000424320 PRPF38BQ5VTL8 546 aaKnown RBP11.45□□□□□ -0.58
SGIP1-205ENST00000424320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.45□□□□□ -0.58
SGIP1-205ENST00000424320 MAP4K5Q9Y4K4 846 aa11.45□□□□□ -0.58
SGIP1-205ENST00000424320 ADGRL1O94910 1474 aa11.44□□□□□ -0.58
SGIP1-205ENST00000424320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.44□□□□□ -0.58
SGIP1-205ENST00000424320 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
SGIP1-205ENST00000424320 TSEN34Q9BSV6 310 aaKnown RBP11.44□□□□□ -0.58
SGIP1-205ENST00000424320 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
SGIP1-205ENST00000424320 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
SGIP1-205ENST00000424320 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
SGIP1-205ENST00000424320 PLEKHD1A6NEE1 506 aa11.43□□□□□ -0.58
SGIP1-205ENST00000424320 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
SGIP1-205ENST00000424320 MAGI3Q5TCQ9 1506 aa11.43□□□□□ -0.58
SGIP1-205ENST00000424320 KIF21BO75037 1637 aa11.42□□□□□ -0.58
SGIP1-205ENST00000424320 PER1O15534 1290 aaPredicted RBP11.42□□□□□ -0.58
SGIP1-205ENST00000424320 FSHRP23945 695 aa11.42□□□□□ -0.58
SGIP1-205ENST00000424320 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
SGIP1-205ENST00000424320 NANOS1Q8WY41 292 aaKnown RBP11.42□□□□□ -0.58
SGIP1-205ENST00000424320 TRMT44Q8IYL2 757 aaKnown RBP11.41□□□□□ -0.58
SGIP1-205ENST00000424320 EMILIN1Q9Y6C2 1016 aa11.41□□□□□ -0.58
SGIP1-205ENST00000424320 TTLL8A6PVC2 850 aa11.4□□□□□ -0.58
SGIP1-205ENST00000424320 PTSQ03393 145 aa11.4□□□□□ -0.58
SGIP1-205ENST00000424320 ARMC2Q8NEN0 867 aa11.4□□□□□ -0.58
SGIP1-205ENST00000424320 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.59
SGIP1-205ENST00000424320 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
SGIP1-205ENST00000424320 CABLES1Q8TDN4 633 aa11.39□□□□□ -0.59
SGIP1-205ENST00000424320 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
SGIP1-205ENST00000424320 ARID4BQ4LE39 1312 aaPredicted RBP11.38□□□□□ -0.59
SGIP1-205ENST00000424320 ZMYND10O75800 440 aa11.38□□□□□ -0.59
SGIP1-205ENST00000424320 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
SGIP1-205ENST00000424320 VASH1Q7L8A9 365 aaPredicted RBP11.38□□□□□ -0.59
SGIP1-205ENST00000424320 RIC3Q7Z5B4 369 aa11.38□□□□□ -0.59
SGIP1-205ENST00000424320 ZNF385CQ66K41 422 aaPredicted RBP11.37□□□□□ -0.59
SGIP1-205ENST00000424320 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
SGIP1-205ENST00000424320 CCDC116Q8IYX3 515 aa11.37□□□□□ -0.59
SGIP1-205ENST00000424320 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
SGIP1-205ENST00000424320 CDK13Q14004 1512 aaKnown RBP11.35□□□□□ -0.59
SGIP1-205ENST00000424320 ABCA9Q8IUA7 1624 aa11.35□□□□□ -0.59
SGIP1-205ENST00000424320 RNFT1Q5M7Z0 435 aa11.35□□□□□ -0.59
SGIP1-205ENST00000424320 CCDC155Q8N6L0 562 aa11.35□□□□□ -0.59
SGIP1-205ENST00000424320 PARP9Q8IXQ6 854 aa11.34□□□□□ -0.59
SGIP1-205ENST00000424320 SPINT1O43278 529 aa11.33□□□□□ -0.6
SGIP1-205ENST00000424320 SLURP2P0DP57 97 aa11.33□□□□□ -0.6
SGIP1-205ENST00000424320 Q6ZVU0 165 aa11.33□□□□□ -0.6
SGIP1-205ENST00000424320 VSIG10Q8N0Z9 540 aa11.33□□□□□ -0.6
SGIP1-205ENST00000424320 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
SGIP1-205ENST00000424320 DNMT3AQ9Y6K1 912 aaPredicted RBP11.33□□□□□ -0.6
SGIP1-205ENST00000424320 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
SGIP1-205ENST00000424320 PHLDB1Q86UU1 1377 aa11.32□□□□□ -0.6
SGIP1-205ENST00000424320 ARAP3Q8WWN8 1544 aa11.32□□□□□ -0.6
SGIP1-205ENST00000424320 FIGNL2A6NMB9 653 aa11.32□□□□□ -0.6
SGIP1-205ENST00000424320 CDK11AQ9UQ88 783 aaPredicted RBP11.32□□□□□ -0.6
SGIP1-205ENST00000424320 NEO1Q92859 1461 aa11.32□□□□□ -0.6
SGIP1-205ENST00000424320 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
SGIP1-205ENST00000424320 CSPP1Q1MSJ5 1256 aa11.31□□□□□ -0.6
SGIP1-205ENST00000424320 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
SGIP1-205ENST00000424320 TSC1Q92574 1164 aa11.31□□□□□ -0.6
SGIP1-205ENST00000424320 FANCAO15360 1455 aa11.31□□□□□ -0.6
SGIP1-205ENST00000424320 ARHGAP35Q9NRY4 1499 aa11.31□□□□□ -0.6
SGIP1-205ENST00000424320 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
SGIP1-205ENST00000424320 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
SGIP1-205ENST00000424320 ARHGEF15O94989 841 aa11.3□□□□□ -0.6
SGIP1-205ENST00000424320 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
SGIP1-205ENST00000424320 PGPEP1Q9NXJ5 209 aa11.3□□□□□ -0.6
SGIP1-205ENST00000424320 DENND4BO75064 1496 aaPredicted RBP11.3□□□□□ -0.6
SGIP1-205ENST00000424320 AKNAQ7Z591 1439 aa11.29□□□□□ -0.6
SGIP1-205ENST00000424320 IGHA1P01876 353 aa11.29□□□□□ -0.6
SGIP1-205ENST00000424320 CBLBQ13191 982 aa11.29□□□□□ -0.6
SGIP1-205ENST00000424320 PPP1R26Q5T8A7 1209 aaPredicted RBP11.29□□□□□ -0.6
SGIP1-205ENST00000424320 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
SGIP1-205ENST00000424320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.29□□□□□ -0.6
SGIP1-205ENST00000424320 LILRB3O75022 631 aa11.28□□□□□ -0.6
SGIP1-205ENST00000424320 ITGA6P23229 1130 aa11.28□□□□□ -0.6
SGIP1-205ENST00000424320 MLECQ14165 292 aa11.28□□□□□ -0.6
SGIP1-205ENST00000424320 QPCTQ16769 361 aa11.28□□□□□ -0.6
SGIP1-205ENST00000424320 ERFEQ4G0M1 354 aa11.28□□□□□ -0.6
SGIP1-205ENST00000424320 LIMD1Q9UGP4 676 aa11.28□□□□□ -0.6
SGIP1-205ENST00000424320 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
SGIP1-205ENST00000424320 CLIP1P30622 1438 aa11.27□□□□□ -0.6
SGIP1-205ENST00000424320 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
SGIP1-205ENST00000424320 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
SGIP1-205ENST00000424320 IRS1P35568 1242 aa11.27□□□□□ -0.61
SGIP1-205ENST00000424320 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
SGIP1-205ENST00000424320 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.61
SGIP1-205ENST00000424320 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
SGIP1-205ENST00000424320 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
SGIP1-205ENST00000424320 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
SGIP1-205ENST00000424320 CFAP74Q9C0B2 1584 aa11.27□□□□□ -0.61
SGIP1-205ENST00000424320 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
SGIP1-205ENST00000424320 VWA5B2Q8N398 1253 aa11.26□□□□□ -0.61
SGIP1-205ENST00000424320 CARD14Q9BXL6 1004 aa11.26□□□□□ -0.61
SGIP1-205ENST00000424320 HECW2Q9P2P5 1572 aa11.25□□□□□ -0.61
SGIP1-205ENST00000424320 FOXK2Q01167 660 aa11.25□□□□□ -0.61
SGIP1-205ENST00000424320 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
SGIP1-205ENST00000424320 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
SGIP1-205ENST00000424320 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
SGIP1-205ENST00000424320 TRIM66O15016 1216 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms