RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
ACTN4-203ENST00000424234 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
ACTN4-203ENST00000424234 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
ACTN4-203ENST00000424234 USP35Q9P2H5 1018 aa18.53■□□□□ 0.56
ACTN4-203ENST00000424234 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
ACTN4-203ENST00000424234 FCHSD2O94868 740 aa18.52■□□□□ 0.56
ACTN4-203ENST00000424234 PRKAR2BP31323 418 aa18.52■□□□□ 0.56
ACTN4-203ENST00000424234 ADAMTS7Q9UKP4 1686 aa18.52■□□□□ 0.55
ACTN4-203ENST00000424234 PLEKHF1Q96S99 279 aa18.51■□□□□ 0.55
ACTN4-203ENST00000424234 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
ACTN4-203ENST00000424234 TOGARAM1Q9Y4F4 1720 aa18.51■□□□□ 0.55
ACTN4-203ENST00000424234 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
ACTN4-203ENST00000424234 TCP11L2Q8N4U5 519 aa18.51■□□□□ 0.55
ACTN4-203ENST00000424234 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
ACTN4-203ENST00000424234 ITGB4P16144 1822 aa18.51■□□□□ 0.55
ACTN4-203ENST00000424234 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
ACTN4-203ENST00000424234 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
ACTN4-203ENST00000424234 TNS2Q63HR2 1409 aa18.5■□□□□ 0.55
ACTN4-203ENST00000424234 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
ACTN4-203ENST00000424234 PDE3BQ13370 1112 aa18.49■□□□□ 0.55
ACTN4-203ENST00000424234 ZNF772Q68DY9 489 aaPredicted RBP18.49■□□□□ 0.55
ACTN4-203ENST00000424234 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
ACTN4-203ENST00000424234 RAPGEF4Q8WZA2 1011 aa18.48■□□□□ 0.55
ACTN4-203ENST00000424234 IL2RBP14784 551 aa18.47■□□□□ 0.55
ACTN4-203ENST00000424234 BARGINQ6ZT62 677 aa18.47■□□□□ 0.55
ACTN4-203ENST00000424234 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
ACTN4-203ENST00000424234 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
ACTN4-203ENST00000424234 RGS17Q9UGC6 210 aaPredicted RBP18.47■□□□□ 0.55
ACTN4-203ENST00000424234 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
ACTN4-203ENST00000424234 PHACTR3Q96KR7 559 aa18.47■□□□□ 0.55
ACTN4-203ENST00000424234 PNNQ9H307 717 aaKnown RBP18.47■□□□□ 0.55
ACTN4-203ENST00000424234 QTRT2Q9H974 415 aaKnown RBP18.47■□□□□ 0.55
ACTN4-203ENST00000424234 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
ACTN4-203ENST00000424234 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
ACTN4-203ENST00000424234 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
ACTN4-203ENST00000424234 NEFMP07197 916 aa18.42■□□□□ 0.54
ACTN4-203ENST00000424234 CDCA7Q9BWT1 371 aaPredicted RBP18.42■□□□□ 0.54
ACTN4-203ENST00000424234 APAF1O14727 1248 aa18.42■□□□□ 0.54
ACTN4-203ENST00000424234 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
ACTN4-203ENST00000424234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.54
ACTN4-203ENST00000424234 RGS12O14924 1447 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 SENP3-EIF4A1A0A087X0R7 540 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 AMOTQ4VCS5 1084 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-203ENST00000424234 POTEAQ6S8J7 498 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 PCDH11XQ9BZA7 1347 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 PCDH11YQ9BZA8 1340 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
ACTN4-203ENST00000424234 KDM3BQ7LBC6 1761 aa18.39■□□□□ 0.53
ACTN4-203ENST00000424234 TMPOP42166 694 aaKnown RBP18.39■□□□□ 0.53
ACTN4-203ENST00000424234 RBM6P78332 1123 aaKnown RBP18.39■□□□□ 0.53
ACTN4-203ENST00000424234 NHSQ6T4R5 1651 aa18.39■□□□□ 0.53
ACTN4-203ENST00000424234 ONECUT3O60422 494 aaPredicted RBP18.38■□□□□ 0.53
ACTN4-203ENST00000424234 ZNF530Q6P9A1 599 aaPredicted RBP18.38■□□□□ 0.53
ACTN4-203ENST00000424234 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
ACTN4-203ENST00000424234 RRP7AQ9Y3A4 280 aaKnown RBP18.38■□□□□ 0.53
ACTN4-203ENST00000424234 MRC1P22897 1456 aa18.38■□□□□ 0.53
ACTN4-203ENST00000424234 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
ACTN4-203ENST00000424234 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
ACTN4-203ENST00000424234 KDM6AO15550 1401 aaPredicted RBP18.38■□□□□ 0.53
ACTN4-203ENST00000424234 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
ACTN4-203ENST00000424234 CYP27B1O15528 508 aa18.37■□□□□ 0.53
ACTN4-203ENST00000424234 DDB1Q16531 1140 aa18.37■□□□□ 0.53
ACTN4-203ENST00000424234 A0A0G2JS52 829 aa18.36■□□□□ 0.53
ACTN4-203ENST00000424234 MYT1Q01538 1121 aa18.36■□□□□ 0.53
ACTN4-203ENST00000424234 B4GALNT3Q6L9W6 998 aa18.36■□□□□ 0.53
ACTN4-203ENST00000424234 BTAF1O14981 1849 aa18.36■□□□□ 0.53
ACTN4-203ENST00000424234 PHKG2P15735 406 aa18.35■□□□□ 0.53
ACTN4-203ENST00000424234 RXRBP28702 533 aa18.35■□□□□ 0.53
ACTN4-203ENST00000424234 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
ACTN4-203ENST00000424234 EXOC5O00471 708 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 RIPK4P57078 832 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
ACTN4-203ENST00000424234 C1orf141Q5JVX7 400 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 IFNL2Q8IZJ0 200 aa18.34■□□□□ 0.53
ACTN4-203ENST00000424234 EP400Q96L91 3159 aa18.33■□□□□ 0.53
ACTN4-203ENST00000424234 TRIM35Q9UPQ4 493 aa18.33■□□□□ 0.52
ACTN4-203ENST00000424234 CEMIPQ8WUJ3 1361 aa18.32■□□□□ 0.52
ACTN4-203ENST00000424234 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
ACTN4-203ENST00000424234 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
ACTN4-203ENST00000424234 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
ACTN4-203ENST00000424234 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
ACTN4-203ENST00000424234 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
ACTN4-203ENST00000424234 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
ACTN4-203ENST00000424234 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
ACTN4-203ENST00000424234 MARCH10Q8NA82 808 aaPredicted RBP18.31■□□□□ 0.52
ACTN4-203ENST00000424234 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
ACTN4-203ENST00000424234 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
ACTN4-203ENST00000424234 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
ACTN4-203ENST00000424234 NKX1-1Q15270 411 aaPredicted RBP18.3■□□□□ 0.52
ACTN4-203ENST00000424234 MCM10Q7L590 875 aa18.3■□□□□ 0.52
ACTN4-203ENST00000424234 BCL9O00512 1426 aa18.29■□□□□ 0.52
ACTN4-203ENST00000424234 HTATSF1O43719 755 aaKnown RBP18.29■□□□□ 0.52
ACTN4-203ENST00000424234 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms