RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 LTV1Q96GA3 475 aaPredicted RBP15.8■□□□□ 0.12
LMO3-206ENST00000424192 CFAP53Q96M91 514 aa15.79■□□□□ 0.12
LMO3-206ENST00000424192 IL2RBP14784 551 aa15.78■□□□□ 0.12
LMO3-206ENST00000424192 BRWD3Q6RI45 1802 aa15.78■□□□□ 0.12
LMO3-206ENST00000424192 MTHFSP49914 203 aa15.77■□□□□ 0.12
LMO3-206ENST00000424192 KRT27Q7Z3Y8 459 aa15.77■□□□□ 0.12
LMO3-206ENST00000424192 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
LMO3-206ENST00000424192 IGSF1Q8N6C5 1336 aa15.76■□□□□ 0.11
LMO3-206ENST00000424192 PDE3BQ13370 1112 aa15.76■□□□□ 0.11
LMO3-206ENST00000424192 EIF4A2Q14240 407 aaKnown RBP15.76■□□□□ 0.11
LMO3-206ENST00000424192 DDB1Q16531 1140 aa15.76■□□□□ 0.11
LMO3-206ENST00000424192 RAPGEF4Q8WZA2 1011 aa15.76■□□□□ 0.11
LMO3-206ENST00000424192 RGPD1P0DJD0 1748 aa15.76■□□□□ 0.11
LMO3-206ENST00000424192 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
LMO3-206ENST00000424192 RGPD2P0DJD1 1756 aa15.75■□□□□ 0.11
LMO3-206ENST00000424192 SPDYE4A6NLX3 237 aa15.75■□□□□ 0.11
LMO3-206ENST00000424192 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
LMO3-206ENST00000424192 PPP2R1AP30153 589 aa15.74■□□□□ 0.11
LMO3-206ENST00000424192 NBPF6Q5VWK0 638 aa15.74■□□□□ 0.11
LMO3-206ENST00000424192 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
LMO3-206ENST00000424192 MEGF6O75095 1541 aa15.73■□□□□ 0.11
LMO3-206ENST00000424192 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
LMO3-206ENST00000424192 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
LMO3-206ENST00000424192 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
LMO3-206ENST00000424192 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
LMO3-206ENST00000424192 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
LMO3-206ENST00000424192 PKD1L3Q7Z443 1732 aa15.73■□□□□ 0.11
LMO3-206ENST00000424192 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
LMO3-206ENST00000424192 BCL9O00512 1426 aa15.72■□□□□ 0.11
LMO3-206ENST00000424192 EXOC5O00471 708 aa15.72■□□□□ 0.11
LMO3-206ENST00000424192 SOCS7O14512 581 aa15.72■□□□□ 0.11
LMO3-206ENST00000424192 KDRP35968 1356 aa15.72■□□□□ 0.11
LMO3-206ENST00000424192 IL13P35225 146 aa15.71■□□□□ 0.11
LMO3-206ENST00000424192 EYA1Q99502 592 aa15.71■□□□□ 0.11
LMO3-206ENST00000424192 NUDCQ9Y266 331 aa15.71■□□□□ 0.11
LMO3-206ENST00000424192 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
LMO3-206ENST00000424192 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
LMO3-206ENST00000424192 PCDH11XQ9BZA7 1347 aa15.69■□□□□ 0.1
LMO3-206ENST00000424192 PCDH11YQ9BZA8 1340 aa15.69■□□□□ 0.1
LMO3-206ENST00000424192 PRKRIP1Q9H875 184 aaPredicted RBP15.69■□□□□ 0.1
LMO3-206ENST00000424192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.69■□□□□ 0.1
LMO3-206ENST00000424192 CCDC125Q86Z20 511 aa15.68■□□□□ 0.1
LMO3-206ENST00000424192 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
LMO3-206ENST00000424192 ZCRB1Q8TBF4 217 aaKnown RBP15.67■□□□□ 0.1
LMO3-206ENST00000424192 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
LMO3-206ENST00000424192 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
LMO3-206ENST00000424192 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
LMO3-206ENST00000424192 EP400Q96L91 3159 aa15.65■□□□□ 0.1
LMO3-206ENST00000424192 ANP32CO43423 234 aa15.65■□□□□ 0.1
LMO3-206ENST00000424192 SF3B2Q13435 895 aaKnown RBP15.65■□□□□ 0.1
LMO3-206ENST00000424192 AMOTQ4VCS5 1084 aa15.65■□□□□ 0.1
LMO3-206ENST00000424192 SULT6B1Q6IMI4 303 aa15.65■□□□□ 0.1
LMO3-206ENST00000424192 NHSQ6T4R5 1651 aa15.64■□□□□ 0.09
LMO3-206ENST00000424192 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
LMO3-206ENST00000424192 TNS1Q9HBL0 1735 aaKnown RBP15.64■□□□□ 0.09
LMO3-206ENST00000424192 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
LMO3-206ENST00000424192 MARCH10Q8NA82 808 aaPredicted RBP15.63■□□□□ 0.09
LMO3-206ENST00000424192 UPF1Q92900 1129 aaKnown RBP eCLIP15.63■□□□□ 0.09
LMO3-206ENST00000424192 RGPD3A6NKT7 1758 aaPredicted RBP15.62■□□□□ 0.09
LMO3-206ENST00000424192 RGPD4Q7Z3J3 1758 aa15.62■□□□□ 0.09
LMO3-206ENST00000424192 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
LMO3-206ENST00000424192 HSP90AB1P08238 724 aaKnown RBP15.61■□□□□ 0.09
LMO3-206ENST00000424192 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
LMO3-206ENST00000424192 DDX54Q8TDD1 881 aaKnown RBP15.61■□□□□ 0.09
LMO3-206ENST00000424192 SBF2Q86WG5 1849 aa15.6■□□□□ 0.09
LMO3-206ENST00000424192 NEFMP07197 916 aa15.6■□□□□ 0.09
LMO3-206ENST00000424192 U2AF1L5P0DN76 240 aaPredicted RBP15.6■□□□□ 0.09
LMO3-206ENST00000424192 U2AF1Q01081 240 aaKnown RBP eCLIP15.6■□□□□ 0.09
LMO3-206ENST00000424192 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
LMO3-206ENST00000424192 HMOX1P09601 288 aa15.59■□□□□ 0.09
LMO3-206ENST00000424192 BAG6P46379 1132 aa15.59■□□□□ 0.09
LMO3-206ENST00000424192 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
LMO3-206ENST00000424192 FAM182BQ5T319 152 aa15.59■□□□□ 0.09
LMO3-206ENST00000424192 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
LMO3-206ENST00000424192 FCHSD2O94868 740 aa15.58■□□□□ 0.08
LMO3-206ENST00000424192 ZNF530Q6P9A1 599 aaPredicted RBP15.58■□□□□ 0.08
LMO3-206ENST00000424192 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
LMO3-206ENST00000424192 CYP27B1O15528 508 aa15.57■□□□□ 0.08
LMO3-206ENST00000424192 PHKG2P15735 406 aa15.57■□□□□ 0.08
LMO3-206ENST00000424192 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
LMO3-206ENST00000424192 NKX1-1Q15270 411 aaPredicted RBP15.57■□□□□ 0.08
LMO3-206ENST00000424192 GAS2L2Q8NHY3 880 aa15.57■□□□□ 0.08
LMO3-206ENST00000424192 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
LMO3-206ENST00000424192 TRIM37O94972 964 aa15.56■□□□□ 0.08
LMO3-206ENST00000424192 PROM2Q8N271 834 aa15.56■□□□□ 0.08
LMO3-206ENST00000424192 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
LMO3-206ENST00000424192 PRKAR2BP31323 418 aa15.55■□□□□ 0.08
LMO3-206ENST00000424192 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
LMO3-206ENST00000424192 MAPK8IP3Q9UPT6 1336 aa15.54■□□□□ 0.08
LMO3-206ENST00000424192 AKAP4Q5JQC9 854 aa15.54■□□□□ 0.08
LMO3-206ENST00000424192 MAP3K5Q99683 1374 aa15.53■□□□□ 0.08
LMO3-206ENST00000424192 BTAF1O14981 1849 aa15.53■□□□□ 0.08
LMO3-206ENST00000424192 MRC1P22897 1456 aa15.52■□□□□ 0.08
LMO3-206ENST00000424192 ADAMTS7Q9UKP4 1686 aa15.52■□□□□ 0.08
LMO3-206ENST00000424192 APBA3O96018 575 aa15.52■□□□□ 0.08
LMO3-206ENST00000424192 AKT1S1Q96B36 256 aa15.52■□□□□ 0.08
LMO3-206ENST00000424192 KDM6AO15550 1401 aaPredicted RBP15.51■□□□□ 0.07
LMO3-206ENST00000424192 RREB1Q92766 1687 aa15.51■□□□□ 0.07
LMO3-206ENST00000424192 PLSCR1O15162 318 aa15.51■□□□□ 0.07
LMO3-206ENST00000424192 HMGB2P26583 209 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms