RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 NCAPD2Q15021 1401 aa22.74■■□□□ 1.23
FOXN4-203ENST00000423960 RGPD2P0DJD1 1756 aa22.74■■□□□ 1.23
FOXN4-203ENST00000423960 DDB1Q16531 1140 aa22.74■■□□□ 1.23
FOXN4-203ENST00000423960 HMOX1P09601 288 aa22.73■■□□□ 1.23
FOXN4-203ENST00000423960 AEBP1Q8IUX7 1158 aa22.73■■□□□ 1.23
FOXN4-203ENST00000423960 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
FOXN4-203ENST00000423960 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
FOXN4-203ENST00000423960 ZCRB1Q8TBF4 217 aaKnown RBP22.71■■□□□ 1.23
FOXN4-203ENST00000423960 KDRP35968 1356 aa22.7■■□□□ 1.22
FOXN4-203ENST00000423960 MEGF6O75095 1541 aa22.69■■□□□ 1.22
FOXN4-203ENST00000423960 APBA3O96018 575 aa22.69■■□□□ 1.22
FOXN4-203ENST00000423960 OVOS2A0A0G2JMS6 1433 aa22.68■■□□□ 1.22
FOXN4-203ENST00000423960 CCDC184Q52MB2 194 aa22.68■■□□□ 1.22
FOXN4-203ENST00000423960 RGPD1P0DJD0 1748 aa22.68■■□□□ 1.22
FOXN4-203ENST00000423960 EZH2Q15910 746 aaKnown RBP22.67■■□□□ 1.22
FOXN4-203ENST00000423960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.67■■□□□ 1.22
FOXN4-203ENST00000423960 SPG7Q9UQ90 795 aa22.67■■□□□ 1.22
FOXN4-203ENST00000423960 PARP4Q9UKK3 1724 aaKnown RBP22.67■■□□□ 1.22
FOXN4-203ENST00000423960 FCHSD2O94868 740 aa22.66■■□□□ 1.22
FOXN4-203ENST00000423960 PLEKHO1Q53GL0 409 aaPredicted RBP22.66■■□□□ 1.22
FOXN4-203ENST00000423960 DDX54Q8TDD1 881 aaKnown RBP22.66■■□□□ 1.22
FOXN4-203ENST00000423960 SRCAPQ6ZRS2 3230 aa22.66■■□□□ 1.22
FOXN4-203ENST00000423960 WDR43Q15061 677 aaKnown RBP eCLIP22.65■■□□□ 1.22
FOXN4-203ENST00000423960 MARCH10Q8NA82 808 aaPredicted RBP22.65■■□□□ 1.22
FOXN4-203ENST00000423960 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
FOXN4-203ENST00000423960 LRRC37A3O60309 1634 aa22.64■■□□□ 1.22
FOXN4-203ENST00000423960 AMOTQ4VCS5 1084 aa22.64■■□□□ 1.21
FOXN4-203ENST00000423960 CAMKK2Q96RR4 588 aa22.64■■□□□ 1.21
FOXN4-203ENST00000423960 RSPH6AQ9H0K4 717 aa22.64■■□□□ 1.21
FOXN4-203ENST00000423960 TNS1Q9HBL0 1735 aaKnown RBP22.64■■□□□ 1.21
FOXN4-203ENST00000423960 TNS2Q63HR2 1409 aa22.64■■□□□ 1.21
FOXN4-203ENST00000423960 PLEKHG2Q9H7P9 1386 aa22.63■■□□□ 1.21
FOXN4-203ENST00000423960 PSDA5PKW4 1024 aaPredicted RBP22.63■■□□□ 1.21
FOXN4-203ENST00000423960 WNK3Q9BYP7 1800 aa22.63■■□□□ 1.21
FOXN4-203ENST00000423960 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
FOXN4-203ENST00000423960 PNNQ9H307 717 aaKnown RBP22.62■■□□□ 1.21
FOXN4-203ENST00000423960 PCDH11XQ9BZA7 1347 aa22.6■■□□□ 1.21
FOXN4-203ENST00000423960 PCDH11YQ9BZA8 1340 aa22.6■■□□□ 1.21
FOXN4-203ENST00000423960 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
FOXN4-203ENST00000423960 CYP27B1O15528 508 aa22.59■■□□□ 1.21
FOXN4-203ENST00000423960 PTF1AQ7RTS3 328 aa22.59■■□□□ 1.21
FOXN4-203ENST00000423960 MIER1Q8N108 512 aa22.59■■□□□ 1.21
FOXN4-203ENST00000423960 ZNF530Q6P9A1 599 aaPredicted RBP22.58■■□□□ 1.21
FOXN4-203ENST00000423960 IFNL2Q8IZJ0 200 aa22.58■■□□□ 1.21
FOXN4-203ENST00000423960 PNISRQ8TF01 805 aaKnown RBP22.58■■□□□ 1.21
FOXN4-203ENST00000423960 PHACTR3Q96KR7 559 aa22.58■■□□□ 1.21
FOXN4-203ENST00000423960 CCER2I3L3R5 266 aa22.57■■□□□ 1.2
FOXN4-203ENST00000423960 NEFMP07197 916 aa22.57■■□□□ 1.2
FOXN4-203ENST00000423960 R3HDM1Q15032 1099 aaKnown RBP22.57■■□□□ 1.2
FOXN4-203ENST00000423960 MTHFSDQ2M296 383 aaKnown RBP22.57■■□□□ 1.2
FOXN4-203ENST00000423960 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
FOXN4-203ENST00000423960 PHKG2P15735 406 aa22.56■■□□□ 1.2
FOXN4-203ENST00000423960 C1orf141Q5JVX7 400 aa22.55■■□□□ 1.2
FOXN4-203ENST00000423960 GAS2L2Q8NHY3 880 aa22.55■■□□□ 1.2
FOXN4-203ENST00000423960 NKX1-1Q15270 411 aaPredicted RBP22.54■■□□□ 1.2
FOXN4-203ENST00000423960 BCL11BQ9C0K0 894 aaPredicted RBP22.54■■□□□ 1.2
FOXN4-203ENST00000423960 HSP90AB1P08238 724 aaKnown RBP22.53■■□□□ 1.2
FOXN4-203ENST00000423960 AKAP4Q5JQC9 854 aa22.53■■□□□ 1.2
FOXN4-203ENST00000423960 BCL9O00512 1426 aa22.53■■□□□ 1.2
FOXN4-203ENST00000423960 PKD1L3Q7Z443 1732 aa22.53■■□□□ 1.2
FOXN4-203ENST00000423960 RUNDC1Q96C34 613 aa22.52■■□□□ 1.2
FOXN4-203ENST00000423960 MAPK8IP3Q9UPT6 1336 aa22.52■■□□□ 1.2
FOXN4-203ENST00000423960 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
FOXN4-203ENST00000423960 ACSBG1Q96GR2 724 aa22.51■■□□□ 1.19
FOXN4-203ENST00000423960 KCNQ2O43526 872 aa22.5■■□□□ 1.19
FOXN4-203ENST00000423960 SHANK3Q9BYB0 1731 aa22.49■■□□□ 1.19
FOXN4-203ENST00000423960 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
FOXN4-203ENST00000423960 DCAF5Q96JK2 942 aa22.49■■□□□ 1.19
FOXN4-203ENST00000423960 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
FOXN4-203ENST00000423960 MPRIPQ6WCQ1 1025 aa22.48■■□□□ 1.19
FOXN4-203ENST00000423960 GNAT3A8MTJ3 354 aa22.47■■□□□ 1.19
FOXN4-203ENST00000423960 PLSCR1O15162 318 aa22.47■■□□□ 1.19
FOXN4-203ENST00000423960 NFE2L2Q16236 605 aa22.47■■□□□ 1.19
FOXN4-203ENST00000423960 NBPF14Q5TI25 921 aa22.47■■□□□ 1.19
FOXN4-203ENST00000423960 SYTL4Q96C24 671 aaPredicted RBP22.46■■□□□ 1.19
FOXN4-203ENST00000423960 LGR6Q9HBX8 967 aa22.45■■□□□ 1.18
FOXN4-203ENST00000423960 ERVV-2B6SEH9 535 aa22.44■■□□□ 1.18
FOXN4-203ENST00000423960 RNMTO43148 476 aaKnown RBP22.44■■□□□ 1.18
FOXN4-203ENST00000423960 TMPOP42166 694 aaKnown RBP22.44■■□□□ 1.18
FOXN4-203ENST00000423960 SBF2Q86WG5 1849 aa22.44■■□□□ 1.18
FOXN4-203ENST00000423960 RREB1Q92766 1687 aa22.44■■□□□ 1.18
FOXN4-203ENST00000423960 MAP3K5Q99683 1374 aa22.44■■□□□ 1.18
FOXN4-203ENST00000423960 HTATSF1O43719 755 aaKnown RBP22.43■■□□□ 1.18
FOXN4-203ENST00000423960 PROM2Q8N271 834 aa22.43■■□□□ 1.18
FOXN4-203ENST00000423960 RTF1Q92541 710 aaKnown RBP22.43■■□□□ 1.18
FOXN4-203ENST00000423960 RIPK4P57078 832 aa22.42■■□□□ 1.18
FOXN4-203ENST00000423960 IL17REQ8NFR9 667 aa22.42■■□□□ 1.18
FOXN4-203ENST00000423960 NUP188Q5SRE5 1749 aa22.42■■□□□ 1.18
FOXN4-203ENST00000423960 KDM6AO15550 1401 aaPredicted RBP22.41■■□□□ 1.18
FOXN4-203ENST00000423960 APAF1O14727 1248 aa22.41■■□□□ 1.18
FOXN4-203ENST00000423960 CABP4P57796 275 aa22.41■■□□□ 1.18
FOXN4-203ENST00000423960 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
FOXN4-203ENST00000423960 TXNRD1Q16881 649 aa22.4■■□□□ 1.18
FOXN4-203ENST00000423960 TMOD3Q9NYL9 352 aa22.4■■□□□ 1.18
FOXN4-203ENST00000423960 RRP7AQ9Y3A4 280 aaKnown RBP22.4■■□□□ 1.18
FOXN4-203ENST00000423960 PIGBQ92521 554 aa22.39■■□□□ 1.17
FOXN4-203ENST00000423960 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.17
FOXN4-203ENST00000423960 MCM10Q7L590 875 aa22.38■■□□□ 1.17
FOXN4-203ENST00000423960 NFATC2IPQ8NCF5 419 aa22.38■■□□□ 1.17
FOXN4-203ENST00000423960 LMOD3Q0VAK6 560 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms