RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PTK2Q05397 1052 aa10.28□□□□□ -0.76
SFXN1-202ENST00000421887 NR6A1Q15406 480 aa10.28□□□□□ -0.76
SFXN1-202ENST00000421887 MBIPQ9NS73 344 aa10.28□□□□□ -0.76
SFXN1-202ENST00000421887 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
SFXN1-202ENST00000421887 ADAM32Q8TC27 787 aa10.27□□□□□ -0.77
SFXN1-202ENST00000421887 IGF1RP08069 1367 aa10.26□□□□□ -0.77
SFXN1-202ENST00000421887 PDE4DQ08499 809 aa10.26□□□□□ -0.77
SFXN1-202ENST00000421887 FOXR1Q6PIV2 292 aa10.26□□□□□ -0.77
SFXN1-202ENST00000421887 RIPOR1Q6ZS17 1223 aa10.26□□□□□ -0.77
SFXN1-202ENST00000421887 ERVH48-1M5A8F1 160 aa10.25□□□□□ -0.77
SFXN1-202ENST00000421887 ITGB2P05107 769 aa10.25□□□□□ -0.77
SFXN1-202ENST00000421887 ZNF837Q96EG3 531 aaPredicted RBP10.25□□□□□ -0.77
SFXN1-202ENST00000421887 OCSTAMPQ9BR26 566 aa10.25□□□□□ -0.77
SFXN1-202ENST00000421887 BCRP11274 1271 aa10.24□□□□□ -0.77
SFXN1-202ENST00000421887 KDF1Q8NAX2 398 aaPredicted RBP10.24□□□□□ -0.77
SFXN1-202ENST00000421887 LILRA1O75019 489 aa10.23□□□□□ -0.77
SFXN1-202ENST00000421887 TRIM22Q8IYM9 498 aa10.23□□□□□ -0.77
SFXN1-202ENST00000421887 RSPH6AQ9H0K4 717 aa10.23□□□□□ -0.77
SFXN1-202ENST00000421887 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
SFXN1-202ENST00000421887 CUX2O14529 1486 aa10.23□□□□□ -0.77
SFXN1-202ENST00000421887 SCRIBQ14160 1630 aa10.22□□□□□ -0.77
SFXN1-202ENST00000421887 PROCP04070 461 aa10.22□□□□□ -0.77
SFXN1-202ENST00000421887 DZIP3Q86Y13 1208 aaKnown RBP10.22□□□□□ -0.77
SFXN1-202ENST00000421887 DBN1Q16643 649 aa10.21□□□□□ -0.77
SFXN1-202ENST00000421887 GMCL1Q96IK5 515 aa10.21□□□□□ -0.77
SFXN1-202ENST00000421887 CYLDQ9NQC7 956 aa10.21□□□□□ -0.77
SFXN1-202ENST00000421887 GTPBP3Q969Y2 492 aaKnown RBP10.2□□□□□ -0.78
SFXN1-202ENST00000421887 ACDQ96AP0 544 aa10.2□□□□□ -0.78
SFXN1-202ENST00000421887 ATP1B4Q9UN42 357 aaPredicted RBP10.2□□□□□ -0.78
SFXN1-202ENST00000421887 GPSM3Q9Y4H4 160 aa10.2□□□□□ -0.78
SFXN1-202ENST00000421887 RNF144AP50876 292 aaPredicted RBP10.19□□□□□ -0.78
SFXN1-202ENST00000421887 GAS2L1Q99501 681 aaPredicted RBP10.19□□□□□ -0.78
SFXN1-202ENST00000421887 K7ELQ4 463 aaPredicted RBP10.18□□□□□ -0.78
SFXN1-202ENST00000421887 TRERF1Q96PN7 1200 aa10.18□□□□□ -0.78
SFXN1-202ENST00000421887 MEN1O00255 615 aa10.17□□□□□ -0.78
SFXN1-202ENST00000421887 H7C1W4 665 aa10.16□□□□□ -0.78
SFXN1-202ENST00000421887 MX2P20592 715 aa10.16□□□□□ -0.78
SFXN1-202ENST00000421887 ATP5J2-PTCD1G3V325 749 aa10.15□□□□□ -0.78
SFXN1-202ENST00000421887 EPS8L1Q8TE68 723 aa10.15□□□□□ -0.78
SFXN1-202ENST00000421887 NSFL1CQ9UNZ2 370 aaKnown RBP10.15□□□□□ -0.78
SFXN1-202ENST00000421887 ERCC6Q03468 1493 aa10.15□□□□□ -0.78
SFXN1-202ENST00000421887 AP1G2O75843 785 aa10.14□□□□□ -0.79
SFXN1-202ENST00000421887 POU4F2Q12837 409 aa10.14□□□□□ -0.79
SFXN1-202ENST00000421887 PNMA1Q8ND90 353 aa10.14□□□□□ -0.79
SFXN1-202ENST00000421887 SLC27A3Q5K4L6 730 aa10.13□□□□□ -0.79
SFXN1-202ENST00000421887 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
SFXN1-202ENST00000421887 DYRK1BQ9Y463 629 aa10.13□□□□□ -0.79
SFXN1-202ENST00000421887 ESPNB1AK53 854 aa10.12□□□□□ -0.79
SFXN1-202ENST00000421887 BAG6P46379 1132 aa10.12□□□□□ -0.79
SFXN1-202ENST00000421887 PPP2R2DQ66LE6 453 aa10.12□□□□□ -0.79
SFXN1-202ENST00000421887 OIP5O43482 229 aa10.11□□□□□ -0.79
SFXN1-202ENST00000421887 SNRPNP63162 240 aaKnown RBP10.11□□□□□ -0.79
SFXN1-202ENST00000421887 Q8N3U1 123 aa10.11□□□□□ -0.79
SFXN1-202ENST00000421887 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
SFXN1-202ENST00000421887 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
SFXN1-202ENST00000421887 DCAF1Q9Y4B6 1507 aa10.11□□□□□ -0.79
SFXN1-202ENST00000421887 KRBA1A5PL33 1030 aa10.1□□□□□ -0.79
SFXN1-202ENST00000421887 FURINP09958 794 aa10.1□□□□□ -0.79
SFXN1-202ENST00000421887 GPC1P35052 558 aa10.1□□□□□ -0.79
SFXN1-202ENST00000421887 LRRC4BQ9NT99 713 aa10.1□□□□□ -0.79
SFXN1-202ENST00000421887 A0A1W2PRU2 124 aa10.09□□□□□ -0.79
SFXN1-202ENST00000421887 SEPT12Q8IYM1 358 aa10.09□□□□□ -0.79
SFXN1-202ENST00000421887 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
SFXN1-202ENST00000421887 NLRP3Q96P20 1036 aa10.09□□□□□ -0.79
SFXN1-202ENST00000421887 OXCT2Q9BYC2 517 aaPredicted RBP10.09□□□□□ -0.79
SFXN1-202ENST00000421887 RRAGCQ9HB90 399 aa10.09□□□□□ -0.79
SFXN1-202ENST00000421887 SKIV2LQ15477 1246 aaKnown RBP10.08□□□□□ -0.8
SFXN1-202ENST00000421887 NUCKS1Q9H1E3 243 aaKnown RBP10.08□□□□□ -0.8
SFXN1-202ENST00000421887 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
SFXN1-202ENST00000421887 ZCCHC6Q5VYS8 1495 aaKnown RBP10.08□□□□□ -0.8
SFXN1-202ENST00000421887 MKL2Q9ULH7 1088 aa10.07□□□□□ -0.8
SFXN1-202ENST00000421887 GIGYF1O75420 1035 aaPredicted RBP10.06□□□□□ -0.8
SFXN1-202ENST00000421887 NBPF10Q6P3W6 841 aaKnown RBP10.06□□□□□ -0.8
SFXN1-202ENST00000421887 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
SFXN1-202ENST00000421887 KRTAP4-8Q9BYQ9 185 aa10.06□□□□□ -0.8
SFXN1-202ENST00000421887 SHISA8B8ZZ34 492 aa10.05□□□□□ -0.8
SFXN1-202ENST00000421887 MAP2K3P46734 347 aa10.05□□□□□ -0.8
SFXN1-202ENST00000421887 TIMMDC1Q9NPL8 285 aa10.05□□□□□ -0.8
SFXN1-202ENST00000421887 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
SFXN1-202ENST00000421887 F11P03951 625 aa10.03□□□□□ -0.8
SFXN1-202ENST00000421887 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
SFXN1-202ENST00000421887 COL8A1P27658 744 aa10.03□□□□□ -0.8
SFXN1-202ENST00000421887 GRIN2CQ14957 1233 aa10.03□□□□□ -0.8
SFXN1-202ENST00000421887 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
SFXN1-202ENST00000421887 PCDHB9Q9Y5E1 797 aa10.03□□□□□ -0.8
SFXN1-202ENST00000421887 CC2D2BQ6DHV5 1058 aa10.02□□□□□ -0.81
SFXN1-202ENST00000421887 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
SFXN1-202ENST00000421887 TAS1R3Q7RTX0 852 aa10.01□□□□□ -0.81
SFXN1-202ENST00000421887 KLRG1Q96E93 195 aa10.01□□□□□ -0.81
SFXN1-202ENST00000421887 PSMG3-AS1Q96PY0 264 aa10.01□□□□□ -0.81
SFXN1-202ENST00000421887 GPAMQ9HCL2 828 aa10.01□□□□□ -0.81
SFXN1-202ENST00000421887 WASLO00401 505 aaPredicted RBP10□□□□□ -0.81
SFXN1-202ENST00000421887 AMPD1P23109 780 aa10□□□□□ -0.81
SFXN1-202ENST00000421887 SH3D19Q5HYK7 790 aa10□□□□□ -0.81
SFXN1-202ENST00000421887 ALYREFQ86V81 257 aaKnown RBP10□□□□□ -0.81
SFXN1-202ENST00000421887 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
SFXN1-202ENST00000421887 ERVK-9P63128 1117 aa9.99□□□□□ -0.81
SFXN1-202ENST00000421887 CLN3Q13286 438 aa9.99□□□□□ -0.81
SFXN1-202ENST00000421887 CFHR5Q9BXR6 569 aa9.99□□□□□ -0.81
SFXN1-202ENST00000421887 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms