RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 TATP17735 454 aaPredicted RBP27.18■■□□□ 1.94
EGFR-204ENST00000420316 EP400Q96L91 3159 aa27.18■■□□□ 1.94
EGFR-204ENST00000420316 TNS2Q63HR2 1409 aa27.16■■□□□ 1.94
EGFR-204ENST00000420316 OVOS2A0A0G2JMS6 1433 aa27.15■■□□□ 1.94
EGFR-204ENST00000420316 U2AF1L5P0DN76 240 aaPredicted RBP27.15■■□□□ 1.94
EGFR-204ENST00000420316 U2AF1Q01081 240 aaKnown RBP eCLIP27.15■■□□□ 1.94
EGFR-204ENST00000420316 FAM196AQ6ZSG2 479 aa27.14■■□□□ 1.94
EGFR-204ENST00000420316 MARCH10Q8NA82 808 aaPredicted RBP27.14■■□□□ 1.94
EGFR-204ENST00000420316 ZCRB1Q8TBF4 217 aaKnown RBP27.14■■□□□ 1.94
EGFR-204ENST00000420316 NUDCQ9Y266 331 aa27.14■■□□□ 1.94
EGFR-204ENST00000420316 KDRP35968 1356 aa27.12■■□□□ 1.93
EGFR-204ENST00000420316 PLEKHG2Q9H7P9 1386 aa27.12■■□□□ 1.93
EGFR-204ENST00000420316 SHANK3Q9BYB0 1731 aa27.12■■□□□ 1.93
EGFR-204ENST00000420316 UPF1Q92900 1129 aaKnown RBP eCLIP27.11■■□□□ 1.93
EGFR-204ENST00000420316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.11■■□□□ 1.93
EGFR-204ENST00000420316 DDX54Q8TDD1 881 aaKnown RBP27.1■■□□□ 1.93
EGFR-204ENST00000420316 MRS2Q9HD23 443 aa27.09■■□□□ 1.93
EGFR-204ENST00000420316 BCL9O00512 1426 aa27.08■■□□□ 1.93
EGFR-204ENST00000420316 CCDC125Q86Z20 511 aa27.08■■□□□ 1.93
EGFR-204ENST00000420316 SPG7Q9UQ90 795 aa27.08■■□□□ 1.93
EGFR-204ENST00000420316 RSPH6AQ9H0K4 717 aa27.07■■□□□ 1.92
EGFR-204ENST00000420316 PKD1L3Q7Z443 1732 aa27.07■■□□□ 1.92
EGFR-204ENST00000420316 PRKAR2BP31323 418 aa27.06■■□□□ 1.92
EGFR-204ENST00000420316 MIER1Q8N108 512 aa27.06■■□□□ 1.92
EGFR-204ENST00000420316 PCDH11XQ9BZA7 1347 aa27.05■■□□□ 1.92
EGFR-204ENST00000420316 PCDH11YQ9BZA8 1340 aa27.05■■□□□ 1.92
EGFR-204ENST00000420316 WDR43Q15061 677 aaKnown RBP eCLIP27.03■■□□□ 1.92
EGFR-204ENST00000420316 AMOTQ4VCS5 1084 aa27.03■■□□□ 1.92
EGFR-204ENST00000420316 PLEKHO1Q53GL0 409 aaPredicted RBP27.03■■□□□ 1.92
EGFR-204ENST00000420316 CYP27B1O15528 508 aa27.02■■□□□ 1.92
EGFR-204ENST00000420316 PHACTR3Q96KR7 559 aa27.02■■□□□ 1.92
EGFR-204ENST00000420316 ADAMTS8Q9UP79 889 aa27.01■■□□□ 1.92
EGFR-204ENST00000420316 TRIM37O94972 964 aa27■■□□□ 1.91
EGFR-204ENST00000420316 ZNF530Q6P9A1 599 aaPredicted RBP27■■□□□ 1.91
EGFR-204ENST00000420316 CCDC146Q8IYE0 955 aa27■■□□□ 1.91
EGFR-204ENST00000420316 FCHSD2O94868 740 aa26.99■■□□□ 1.91
EGFR-204ENST00000420316 MTHFSDQ2M296 383 aaKnown RBP26.99■■□□□ 1.91
EGFR-204ENST00000420316 SF3B2Q13435 895 aaKnown RBP26.98■■□□□ 1.91
EGFR-204ENST00000420316 IFNL2Q8IZJ0 200 aa26.98■■□□□ 1.91
EGFR-204ENST00000420316 ACSBG1Q96GR2 724 aa26.98■■□□□ 1.91
EGFR-204ENST00000420316 KAT6BQ8WYB5 2073 aa26.98■■□□□ 1.91
EGFR-204ENST00000420316 NKX1-1Q15270 411 aaPredicted RBP26.97■■□□□ 1.91
EGFR-204ENST00000420316 PHKG2P15735 406 aa26.96■■□□□ 1.91
EGFR-204ENST00000420316 PNISRQ8TF01 805 aaKnown RBP26.96■■□□□ 1.91
EGFR-204ENST00000420316 BCL11BQ9C0K0 894 aaPredicted RBP26.96■■□□□ 1.91
EGFR-204ENST00000420316 PTF1AQ7RTS3 328 aa26.95■■□□□ 1.9
EGFR-204ENST00000420316 PLEKHF1Q96S99 279 aa26.95■■□□□ 1.9
EGFR-204ENST00000420316 SBF2Q86WG5 1849 aa26.94■■□□□ 1.9
EGFR-204ENST00000420316 SENP3-EIF4A1A0A087X0R7 540 aa26.94■■□□□ 1.9
EGFR-204ENST00000420316 FAM9BQ8IZU0 186 aa26.93■■□□□ 1.9
EGFR-204ENST00000420316 DOT1LQ8TEK3 1739 aa26.93■■□□□ 1.9
EGFR-204ENST00000420316 KCNQ2O43526 872 aa26.92■■□□□ 1.9
EGFR-204ENST00000420316 TOGARAM1Q9Y4F4 1720 aa26.91■■□□□ 1.9
EGFR-204ENST00000420316 HSP90AB1P08238 724 aaKnown RBP26.91■■□□□ 1.9
EGFR-204ENST00000420316 C1orf141Q5JVX7 400 aa26.91■■□□□ 1.9
EGFR-204ENST00000420316 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
EGFR-204ENST00000420316 APBA3O96018 575 aa26.9■■□□□ 1.9
EGFR-204ENST00000420316 PNNQ9H307 717 aaKnown RBP26.9■■□□□ 1.9
EGFR-204ENST00000420316 BAG6P46379 1132 aa26.89■■□□□ 1.9
EGFR-204ENST00000420316 PRIM1P49642 420 aaKnown RBP26.89■■□□□ 1.9
EGFR-204ENST00000420316 MAPK8IP3Q9UPT6 1336 aa26.89■■□□□ 1.9
EGFR-204ENST00000420316 AKAP4Q5JQC9 854 aa26.88■■□□□ 1.89
EGFR-204ENST00000420316 SYTL4Q96C24 671 aaPredicted RBP26.88■■□□□ 1.89
EGFR-204ENST00000420316 VIRMAQ69YN4 1812 aaKnown RBP26.88■■□□□ 1.89
EGFR-204ENST00000420316 CCER2I3L3R5 266 aa26.88■■□□□ 1.89
EGFR-204ENST00000420316 GAS2L2Q8NHY3 880 aa26.88■■□□□ 1.89
EGFR-204ENST00000420316 DCAF5Q96JK2 942 aa26.88■■□□□ 1.89
EGFR-204ENST00000420316 DLG5Q8TDM6 1919 aa26.87■■□□□ 1.89
EGFR-204ENST00000420316 NEFMP07197 916 aa26.87■■□□□ 1.89
EGFR-204ENST00000420316 RRP7AQ9Y3A4 280 aaKnown RBP26.87■■□□□ 1.89
EGFR-204ENST00000420316 KDM6AO15550 1401 aaPredicted RBP26.86■■□□□ 1.89
EGFR-204ENST00000420316 DEFB132Q7Z7B7 95 aa26.86■■□□□ 1.89
EGFR-204ENST00000420316 LGR6Q9HBX8 967 aa26.86■■□□□ 1.89
EGFR-204ENST00000420316 RUNDC1Q96C34 613 aa26.85■■□□□ 1.89
EGFR-204ENST00000420316 NHSQ6T4R5 1651 aa26.85■■□□□ 1.89
EGFR-204ENST00000420316 ITGB4P16144 1822 aa26.85■■□□□ 1.89
EGFR-204ENST00000420316 PLSCR1O15162 318 aa26.84■■□□□ 1.89
EGFR-204ENST00000420316 TNS1Q9HBL0 1735 aaKnown RBP26.84■■□□□ 1.89
EGFR-204ENST00000420316 NEUROD2Q15784 382 aa26.84■■□□□ 1.89
EGFR-204ENST00000420316 MAP3K5Q99683 1374 aa26.84■■□□□ 1.89
EGFR-204ENST00000420316 ERVV-2B6SEH9 535 aa26.83■■□□□ 1.89
EGFR-204ENST00000420316 SCN11AQ9UI33 1791 aa26.82■■□□□ 1.88
EGFR-204ENST00000420316 GNAT3A8MTJ3 354 aa26.82■■□□□ 1.88
EGFR-204ENST00000420316 EN1Q05925 392 aaPredicted RBP26.82■■□□□ 1.88
EGFR-204ENST00000420316 DCTN1Q14203 1278 aa26.82■■□□□ 1.88
EGFR-204ENST00000420316 NFE2L2Q16236 605 aa26.82■■□□□ 1.88
EGFR-204ENST00000420316 CAMKK2Q96RR4 588 aa26.81■■□□□ 1.88
EGFR-204ENST00000420316 RNMTO43148 476 aaKnown RBP26.8■■□□□ 1.88
EGFR-204ENST00000420316 BTAF1O14981 1849 aa26.8■■□□□ 1.88
EGFR-204ENST00000420316 APAF1O14727 1248 aa26.8■■□□□ 1.88
EGFR-204ENST00000420316 TMPOP42166 694 aaKnown RBP26.8■■□□□ 1.88
EGFR-204ENST00000420316 MCM10Q7L590 875 aa26.8■■□□□ 1.88
EGFR-204ENST00000420316 IL17REQ8NFR9 667 aa26.8■■□□□ 1.88
EGFR-204ENST00000420316 RIPK4P57078 832 aa26.78■■□□□ 1.88
EGFR-204ENST00000420316 TMOD3Q9NYL9 352 aa26.78■■□□□ 1.88
EGFR-204ENST00000420316 EZH2Q15910 746 aaKnown RBP26.77■■□□□ 1.88
EGFR-204ENST00000420316 PIGBQ92521 554 aa26.77■■□□□ 1.88
EGFR-204ENST00000420316 THUMPD2Q9BTF0 503 aaKnown RBP26.77■■□□□ 1.88
EGFR-204ENST00000420316 ADAMTS7Q9UKP4 1686 aa26.76■■□□□ 1.87
EGFR-204ENST00000420316 CABP4P57796 275 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms