RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 RAPGEF4Q8WZA2 1011 aa16.45■□□□□ 0.22
TMEM253-201ENST00000418511 CDCA7Q9BWT1 371 aaPredicted RBP16.45■□□□□ 0.22
TMEM253-201ENST00000418511 DDB1Q16531 1140 aa16.45■□□□□ 0.22
TMEM253-201ENST00000418511 FAM182BQ5T319 152 aa16.45■□□□□ 0.22
TMEM253-201ENST00000418511 RTN4Q9NQC3 1192 aaKnown RBP16.45■□□□□ 0.22
TMEM253-201ENST00000418511 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
TMEM253-201ENST00000418511 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
TMEM253-201ENST00000418511 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
TMEM253-201ENST00000418511 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
TMEM253-201ENST00000418511 KRT27Q7Z3Y8 459 aa16.43■□□□□ 0.22
TMEM253-201ENST00000418511 EXOC5O00471 708 aa16.42■□□□□ 0.22
TMEM253-201ENST00000418511 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
TMEM253-201ENST00000418511 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
TMEM253-201ENST00000418511 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
TMEM253-201ENST00000418511 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
TMEM253-201ENST00000418511 MARCH10Q8NA82 808 aaPredicted RBP16.4■□□□□ 0.22
TMEM253-201ENST00000418511 RSPH6AQ9H0K4 717 aa16.4■□□□□ 0.22
TMEM253-201ENST00000418511 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
TMEM253-201ENST00000418511 KAT6BQ8WYB5 2073 aa16.4■□□□□ 0.22
TMEM253-201ENST00000418511 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
TMEM253-201ENST00000418511 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
TMEM253-201ENST00000418511 PRKAR2BP31323 418 aa16.39■□□□□ 0.21
TMEM253-201ENST00000418511 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
TMEM253-201ENST00000418511 MIER1Q8N108 512 aa16.38■□□□□ 0.21
TMEM253-201ENST00000418511 CYP27B1O15528 508 aa16.37■□□□□ 0.21
TMEM253-201ENST00000418511 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
TMEM253-201ENST00000418511 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
TMEM253-201ENST00000418511 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
TMEM253-201ENST00000418511 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
TMEM253-201ENST00000418511 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
TMEM253-201ENST00000418511 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
TMEM253-201ENST00000418511 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
TMEM253-201ENST00000418511 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
TMEM253-201ENST00000418511 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
TMEM253-201ENST00000418511 FCHSD2O94868 740 aa16.35■□□□□ 0.21
TMEM253-201ENST00000418511 PLEKHO1Q53GL0 409 aaPredicted RBP16.35■□□□□ 0.21
TMEM253-201ENST00000418511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.21
TMEM253-201ENST00000418511 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
TMEM253-201ENST00000418511 PLEKHG2Q9H7P9 1386 aa16.35■□□□□ 0.21
TMEM253-201ENST00000418511 MTHFSDQ2M296 383 aaKnown RBP16.35■□□□□ 0.21
TMEM253-201ENST00000418511 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
TMEM253-201ENST00000418511 ITGB4P16144 1822 aa16.34■□□□□ 0.21
TMEM253-201ENST00000418511 AMOTQ4VCS5 1084 aa16.34■□□□□ 0.21
TMEM253-201ENST00000418511 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
TMEM253-201ENST00000418511 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
TMEM253-201ENST00000418511 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
TMEM253-201ENST00000418511 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
TMEM253-201ENST00000418511 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.2
TMEM253-201ENST00000418511 PHKG2P15735 406 aa16.33■□□□□ 0.2
TMEM253-201ENST00000418511 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
TMEM253-201ENST00000418511 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
TMEM253-201ENST00000418511 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
TMEM253-201ENST00000418511 BCL9O00512 1426 aa16.31■□□□□ 0.2
TMEM253-201ENST00000418511 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
TMEM253-201ENST00000418511 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
TMEM253-201ENST00000418511 BTAF1O14981 1849 aa16.3■□□□□ 0.2
TMEM253-201ENST00000418511 KDM6AO15550 1401 aaPredicted RBP16.3■□□□□ 0.2
TMEM253-201ENST00000418511 TRIM37O94972 964 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 C1orf141Q5JVX7 400 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 MAPK8IP3Q9UPT6 1336 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 KCNQ2O43526 872 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 DEFB132Q7Z7B7 95 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
TMEM253-201ENST00000418511 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
TMEM253-201ENST00000418511 AKAP4Q5JQC9 854 aa16.28■□□□□ 0.2
TMEM253-201ENST00000418511 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
TMEM253-201ENST00000418511 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
TMEM253-201ENST00000418511 NEFMP07197 916 aa16.27■□□□□ 0.2
TMEM253-201ENST00000418511 KCNA4P22459 653 aa16.27■□□□□ 0.2
TMEM253-201ENST00000418511 PNNQ9H307 717 aaKnown RBP16.27■□□□□ 0.2
TMEM253-201ENST00000418511 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
TMEM253-201ENST00000418511 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
TMEM253-201ENST00000418511 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
TMEM253-201ENST00000418511 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
TMEM253-201ENST00000418511 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
TMEM253-201ENST00000418511 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
TMEM253-201ENST00000418511 LGR6Q9HBX8 967 aa16.25■□□□□ 0.19
TMEM253-201ENST00000418511 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
TMEM253-201ENST00000418511 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
TMEM253-201ENST00000418511 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
TMEM253-201ENST00000418511 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
TMEM253-201ENST00000418511 RNMTO43148 476 aaKnown RBP16.23■□□□□ 0.19
TMEM253-201ENST00000418511 TMPOP42166 694 aaKnown RBP16.23■□□□□ 0.19
TMEM253-201ENST00000418511 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
TMEM253-201ENST00000418511 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
TMEM253-201ENST00000418511 BCL11BQ9C0K0 894 aaPredicted RBP16.23■□□□□ 0.19
TMEM253-201ENST00000418511 MRC1P22897 1456 aa16.22■□□□□ 0.19
TMEM253-201ENST00000418511 RREB1Q92766 1687 aa16.22■□□□□ 0.19
TMEM253-201ENST00000418511 APAF1O14727 1248 aa16.22■□□□□ 0.19
TMEM253-201ENST00000418511 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
TMEM253-201ENST00000418511 MCM10Q7L590 875 aa16.22■□□□□ 0.19
TMEM253-201ENST00000418511 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
TMEM253-201ENST00000418511 RIPK4P57078 832 aa16.21■□□□□ 0.19
TMEM253-201ENST00000418511 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
TMEM253-201ENST00000418511 APBA3O96018 575 aa16.2■□□□□ 0.18
TMEM253-201ENST00000418511 PIGBQ92521 554 aa16.2■□□□□ 0.18
TMEM253-201ENST00000418511 THUMPD2Q9BTF0 503 aaKnown RBP16.2■□□□□ 0.18
TMEM253-201ENST00000418511 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms