RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
SYNC-203ENST00000417633 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
SYNC-203ENST00000417633 MEGF6O75095 1541 aa15.3■□□□□ 0.04
SYNC-203ENST00000417633 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
SYNC-203ENST00000417633 PLEKHO1Q53GL0 409 aaPredicted RBP15.3■□□□□ 0.04
SYNC-203ENST00000417633 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
SYNC-203ENST00000417633 APAF1O14727 1248 aa15.29■□□□□ 0.04
SYNC-203ENST00000417633 PARP4Q9UKK3 1724 aaKnown RBP15.29■□□□□ 0.04
SYNC-203ENST00000417633 GLI3P10071 1580 aa15.28■□□□□ 0.04
SYNC-203ENST00000417633 TMPOP42166 694 aaKnown RBP15.28■□□□□ 0.04
SYNC-203ENST00000417633 MTHFSDQ2M296 383 aaKnown RBP15.28■□□□□ 0.04
SYNC-203ENST00000417633 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
SYNC-203ENST00000417633 GAS2L2Q8NHY3 880 aa15.28■□□□□ 0.04
SYNC-203ENST00000417633 ZCRB1Q8TBF4 217 aaKnown RBP15.28■□□□□ 0.04
SYNC-203ENST00000417633 SPG7Q9UQ90 795 aa15.28■□□□□ 0.04
SYNC-203ENST00000417633 WNK3Q9BYP7 1800 aa15.28■□□□□ 0.04
SYNC-203ENST00000417633 RBM6P78332 1123 aaKnown RBP15.27■□□□□ 0.04
SYNC-203ENST00000417633 NFE2L2Q16236 605 aa15.27■□□□□ 0.04
SYNC-203ENST00000417633 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
SYNC-203ENST00000417633 PKD1L3Q7Z443 1732 aa15.26■□□□□ 0.03
SYNC-203ENST00000417633 EXOC5O00471 708 aa15.26■□□□□ 0.03
SYNC-203ENST00000417633 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
SYNC-203ENST00000417633 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
SYNC-203ENST00000417633 RIPK4P57078 832 aa15.24■□□□□ 0.03
SYNC-203ENST00000417633 DDB1Q16531 1140 aa15.24■□□□□ 0.03
SYNC-203ENST00000417633 CCDC27Q2M243 656 aa15.24■□□□□ 0.03
SYNC-203ENST00000417633 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
SYNC-203ENST00000417633 POTEAQ6S8J7 498 aa15.24■□□□□ 0.03
SYNC-203ENST00000417633 THSD7AQ9UPZ6 1657 aa15.24■□□□□ 0.03
SYNC-203ENST00000417633 PCDH11XQ9BZA7 1347 aa15.23■□□□□ 0.03
SYNC-203ENST00000417633 PCDH11YQ9BZA8 1340 aa15.23■□□□□ 0.03
SYNC-203ENST00000417633 CYP27B1O15528 508 aa15.23■□□□□ 0.03
SYNC-203ENST00000417633 RXRBP28702 533 aa15.23■□□□□ 0.03
SYNC-203ENST00000417633 ZNF530Q6P9A1 599 aaPredicted RBP15.23■□□□□ 0.03
SYNC-203ENST00000417633 IFNL2Q8IZJ0 200 aa15.23■□□□□ 0.03
SYNC-203ENST00000417633 DLG5Q8TDM6 1919 aa15.23■□□□□ 0.03
SYNC-203ENST00000417633 GNAT3A8MTJ3 354 aa15.22■□□□□ 0.03
SYNC-203ENST00000417633 PHKG2P15735 406 aa15.22■□□□□ 0.03
SYNC-203ENST00000417633 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
SYNC-203ENST00000417633 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
SYNC-203ENST00000417633 C1orf141Q5JVX7 400 aa15.22■□□□□ 0.03
SYNC-203ENST00000417633 SEPT12Q8IYM1 358 aa15.22■□□□□ 0.03
SYNC-203ENST00000417633 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
SYNC-203ENST00000417633 RRP7AQ9Y3A4 280 aaKnown RBP15.22■□□□□ 0.03
SYNC-203ENST00000417633 TNS2Q63HR2 1409 aa15.22■□□□□ 0.03
SYNC-203ENST00000417633 SHANK3Q9BYB0 1731 aa15.22■□□□□ 0.03
SYNC-203ENST00000417633 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
SYNC-203ENST00000417633 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
SYNC-203ENST00000417633 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
SYNC-203ENST00000417633 MAP3K5Q99683 1374 aa15.21■□□□□ 0.02
SYNC-203ENST00000417633 LRRC37A3O60309 1634 aa15.21■□□□□ 0.02
SYNC-203ENST00000417633 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
SYNC-203ENST00000417633 WWC1Q8IX03 1113 aa15.19■□□□□ 0.02
SYNC-203ENST00000417633 RTF1Q92541 710 aaKnown RBP15.19■□□□□ 0.02
SYNC-203ENST00000417633 ZNF521Q96K83 1311 aa15.18■□□□□ 0.02
SYNC-203ENST00000417633 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
SYNC-203ENST00000417633 PDE3BQ13370 1112 aa15.18■□□□□ 0.02
SYNC-203ENST00000417633 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
SYNC-203ENST00000417633 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
SYNC-203ENST00000417633 DCAF5Q96JK2 942 aa15.18■□□□□ 0.02
SYNC-203ENST00000417633 SALL2Q9Y467 1007 aaPredicted RBP15.18■□□□□ 0.02
SYNC-203ENST00000417633 CEMIPQ8WUJ3 1361 aa15.18■□□□□ 0.02
SYNC-203ENST00000417633 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 A0A0G2JS52 829 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 MYT1Q01538 1121 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 MPRIPQ6WCQ1 1025 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
SYNC-203ENST00000417633 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
SYNC-203ENST00000417633 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
SYNC-203ENST00000417633 MCM10Q7L590 875 aa15.15■□□□□ 0.02
SYNC-203ENST00000417633 SCN11AQ9UI33 1791 aa15.15■□□□□ 0.02
SYNC-203ENST00000417633 BCL9O00512 1426 aa15.15■□□□□ 0.02
SYNC-203ENST00000417633 KDM6AO15550 1401 aaPredicted RBP15.15■□□□□ 0.02
SYNC-203ENST00000417633 VIRMAQ69YN4 1812 aaKnown RBP15.15■□□□□ 0.02
SYNC-203ENST00000417633 IL16Q14005 1332 aa15.15■□□□□ 0.02
SYNC-203ENST00000417633 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
SYNC-203ENST00000417633 KRT27Q7Z3Y8 459 aa15.14■□□□□ 0.01
SYNC-203ENST00000417633 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
SYNC-203ENST00000417633 BRWD3Q6RI45 1802 aa15.14■□□□□ 0.01
SYNC-203ENST00000417633 RGS12O14924 1447 aa15.14■□□□□ 0.01
SYNC-203ENST00000417633 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
SYNC-203ENST00000417633 KAT6BQ8WYB5 2073 aa15.12■□□□□ 0.01
SYNC-203ENST00000417633 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
SYNC-203ENST00000417633 SLC52A2Q9HAB3 445 aa15.12■□□□□ 0.01
SYNC-203ENST00000417633 BABAM1Q9NWV8 329 aa15.12■□□□□ 0.01
SYNC-203ENST00000417633 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
SYNC-203ENST00000417633 TEFQ10587 303 aa15.11■□□□□ 0.01
SYNC-203ENST00000417633 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
SYNC-203ENST00000417633 CFAP44Q96MT7 982 aa15.11■□□□□ 0.01
SYNC-203ENST00000417633 MRC1P22897 1456 aa15.11■□□□□ 0.01
SYNC-203ENST00000417633 CHL1O00533 1208 aa15.1■□□□□ 0.01
SYNC-203ENST00000417633 CABP4P57796 275 aa15.1■□□□□ 0.01
SYNC-203ENST00000417633 GNAI1P63096 354 aa15.1■□□□□ 0.01
SYNC-203ENST00000417633 FAM196AQ6ZSG2 479 aa15.1■□□□□ 0.01
SYNC-203ENST00000417633 IFT57Q9NWB7 429 aa15.1■□□□□ 0.01
SYNC-203ENST00000417633 TOGARAM1Q9Y4F4 1720 aa15.09■□□□□ 0.01
SYNC-203ENST00000417633 SIPA1L3O60292 1781 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms