RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 RREB1Q92766 1687 aa10.31□□□□□ -0.76
CASP4-202ENST00000417440 KTN1Q86UP2 1357 aaKnown RBP10.31□□□□□ -0.76
CASP4-202ENST00000417440 TXNRD1Q16881 649 aa10.31□□□□□ -0.76
CASP4-202ENST00000417440 NLRP2Q9NX02 1062 aa10.31□□□□□ -0.76
CASP4-202ENST00000417440 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.31□□□□□ -0.76
CASP4-202ENST00000417440 PARP4Q9UKK3 1724 aaKnown RBP10.3□□□□□ -0.76
CASP4-202ENST00000417440 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
CASP4-202ENST00000417440 ZNF467Q7Z7K2 595 aaPredicted RBP10.3□□□□□ -0.76
CASP4-202ENST00000417440 TTC21AQ8NDW8 1320 aa10.3□□□□□ -0.76
CASP4-202ENST00000417440 LRRC37A3O60309 1634 aa10.29□□□□□ -0.76
CASP4-202ENST00000417440 NINLQ9Y2I6 1382 aa10.29□□□□□ -0.76
CASP4-202ENST00000417440 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
CASP4-202ENST00000417440 SLC15A2Q16348 729 aa10.29□□□□□ -0.76
CASP4-202ENST00000417440 NME9Q86XW9 330 aa10.29□□□□□ -0.76
CASP4-202ENST00000417440 PIK3C2AO00443 1686 aa10.28□□□□□ -0.76
CASP4-202ENST00000417440 CCDC7Q96M83 1385 aa10.27□□□□□ -0.76
CASP4-202ENST00000417440 PEAK1Q9H792 1746 aa10.27□□□□□ -0.76
CASP4-202ENST00000417440 PTGER2P43116 358 aa10.27□□□□□ -0.77
CASP4-202ENST00000417440 HDGFL2Q7Z4V5 671 aaPredicted RBP10.27□□□□□ -0.77
CASP4-202ENST00000417440 ZNF579Q8NAF0 562 aaKnown RBP10.27□□□□□ -0.77
CASP4-202ENST00000417440 ANKRD24Q8TF21 1146 aa10.27□□□□□ -0.77
CASP4-202ENST00000417440 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
CASP4-202ENST00000417440 LTV1Q96GA3 475 aaPredicted RBP10.27□□□□□ -0.77
CASP4-202ENST00000417440 CARD11Q9BXL7 1154 aa10.27□□□□□ -0.77
CASP4-202ENST00000417440 SLC12A5Q9H2X9 1139 aa10.27□□□□□ -0.77
CASP4-202ENST00000417440 IL2RBP14784 551 aa10.26□□□□□ -0.77
CASP4-202ENST00000417440 FHDC1Q9C0D6 1143 aaPredicted RBP10.26□□□□□ -0.77
CASP4-202ENST00000417440 COL18A1P39060 1754 aa10.26□□□□□ -0.77
CASP4-202ENST00000417440 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
CASP4-202ENST00000417440 DDX54Q8TDD1 881 aaKnown RBP10.25□□□□□ -0.77
CASP4-202ENST00000417440 BCL9O00512 1426 aa10.24□□□□□ -0.77
CASP4-202ENST00000417440 NFAT5O94916 1531 aa10.24□□□□□ -0.77
CASP4-202ENST00000417440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
CASP4-202ENST00000417440 STK25O00506 426 aa10.24□□□□□ -0.77
CASP4-202ENST00000417440 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
CASP4-202ENST00000417440 SYT17Q9BSW7 474 aa10.24□□□□□ -0.77
CASP4-202ENST00000417440 MTFR1LQ9H019 292 aa10.24□□□□□ -0.77
CASP4-202ENST00000417440 ERBB3P21860 1342 aa10.24□□□□□ -0.77
CASP4-202ENST00000417440 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
CASP4-202ENST00000417440 MAP3K13O43283 966 aa10.23□□□□□ -0.77
CASP4-202ENST00000417440 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
CASP4-202ENST00000417440 ZNF827Q17R98 1081 aa10.23□□□□□ -0.77
CASP4-202ENST00000417440 SYTL4Q96C24 671 aaPredicted RBP10.23□□□□□ -0.77
CASP4-202ENST00000417440 ARXQ96QS3 562 aa10.23□□□□□ -0.77
CASP4-202ENST00000417440 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
CASP4-202ENST00000417440 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
CASP4-202ENST00000417440 USP31Q70CQ4 1352 aa10.23□□□□□ -0.77
CASP4-202ENST00000417440 RGPD5Q99666 1765 aa10.22□□□□□ -0.77
CASP4-202ENST00000417440 SBF2Q86WG5 1849 aa10.22□□□□□ -0.77
CASP4-202ENST00000417440 KCNQ4P56696 695 aa10.22□□□□□ -0.77
CASP4-202ENST00000417440 PELP1Q8IZL8 1130 aaKnown RBP10.22□□□□□ -0.77
CASP4-202ENST00000417440 LRRC4BQ9NT99 713 aa10.22□□□□□ -0.77
CASP4-202ENST00000417440 TERF2IPQ9NYB0 399 aa10.22□□□□□ -0.77
CASP4-202ENST00000417440 SBNO2Q9Y2G9 1366 aa10.22□□□□□ -0.77
CASP4-202ENST00000417440 FBLN1P23142 703 aa10.21□□□□□ -0.77
CASP4-202ENST00000417440 ZNF784Q8NCA9 323 aaPredicted RBP10.21□□□□□ -0.77
CASP4-202ENST00000417440 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
CASP4-202ENST00000417440 AKAP12Q02952 1782 aa10.21□□□□□ -0.78
CASP4-202ENST00000417440 CASZ1Q86V15 1759 aa10.21□□□□□ -0.78
CASP4-202ENST00000417440 RGPD3A6NKT7 1758 aaPredicted RBP10.2□□□□□ -0.78
CASP4-202ENST00000417440 AMPHP49418 695 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 PRIM1P49642 420 aaKnown RBP10.2□□□□□ -0.78
CASP4-202ENST00000417440 MYOM1P52179 1685 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 GPR162Q16538 588 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
CASP4-202ENST00000417440 RGPD4Q7Z3J3 1758 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 IFNL1Q8IU54 200 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 IP6K1Q92551 441 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 CD163L1Q9NR16 1453 aa10.2□□□□□ -0.78
CASP4-202ENST00000417440 WNK3Q9BYP7 1800 aa10.19□□□□□ -0.78
CASP4-202ENST00000417440 EDC4Q6P2E9 1401 aaKnown RBP10.19□□□□□ -0.78
CASP4-202ENST00000417440 A0A1W2PP64 1363 aa10.19□□□□□ -0.78
CASP4-202ENST00000417440 TONSLQ96HA7 1378 aa10.19□□□□□ -0.78
CASP4-202ENST00000417440 COG3Q96JB2 828 aa10.19□□□□□ -0.78
CASP4-202ENST00000417440 TFCP2L1Q9NZI6 479 aa10.19□□□□□ -0.78
CASP4-202ENST00000417440 POLD1P28340 1107 aa10.18□□□□□ -0.78
CASP4-202ENST00000417440 PSEN1P49768 467 aa10.18□□□□□ -0.78
CASP4-202ENST00000417440 NKX1-1Q15270 411 aaPredicted RBP10.18□□□□□ -0.78
CASP4-202ENST00000417440 STK24Q9Y6E0 443 aa10.18□□□□□ -0.78
CASP4-202ENST00000417440 ABCC6O95255 1503 aa10.17□□□□□ -0.78
CASP4-202ENST00000417440 MAP3K19Q56UN5 1328 aa10.17□□□□□ -0.78
CASP4-202ENST00000417440 ST20-MTHFSA0A0A6YYL1 179 aa10.17□□□□□ -0.78
CASP4-202ENST00000417440 HOXC9P31274 260 aa10.17□□□□□ -0.78
CASP4-202ENST00000417440 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
CASP4-202ENST00000417440 USHBP1Q8N6Y0 703 aa10.17□□□□□ -0.78
CASP4-202ENST00000417440 MON2Q7Z3U7 1717 aa10.16□□□□□ -0.78
CASP4-202ENST00000417440 NHSQ6T4R5 1651 aa10.16□□□□□ -0.78
CASP4-202ENST00000417440 PNPLA7Q6ZV29 1317 aa10.16□□□□□ -0.78
CASP4-202ENST00000417440 SENP3-EIF4A1A0A087X0R7 540 aa10.16□□□□□ -0.78
CASP4-202ENST00000417440 RRS1Q15050 365 aaKnown RBP10.16□□□□□ -0.78
CASP4-202ENST00000417440 ZCRB1Q8TBF4 217 aaKnown RBP10.16□□□□□ -0.78
CASP4-202ENST00000417440 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
CASP4-202ENST00000417440 GGNBP2Q9H3C7 697 aa10.15□□□□□ -0.78
CASP4-202ENST00000417440 CCNL1Q9UK58 526 aaPredicted RBP10.15□□□□□ -0.78
CASP4-202ENST00000417440 HAX1O00165 279 aa10.14□□□□□ -0.79
CASP4-202ENST00000417440 NBPF6Q5VWK0 638 aa10.14□□□□□ -0.79
CASP4-202ENST00000417440 MSL1Q68DK7 614 aa10.14□□□□□ -0.79
CASP4-202ENST00000417440 NLGN2Q8NFZ4 835 aa10.14□□□□□ -0.79
CASP4-202ENST00000417440 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms