RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.68
AP001042.1-201ENST00000416842 PROM2Q8N271 834 aa10.81□□□□□ -0.68
AP001042.1-201ENST00000416842 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
AP001042.1-201ENST00000416842 SMG6Q86US8 1419 aaKnown RBP10.8□□□□□ -0.68
AP001042.1-201ENST00000416842 ZBED9Q6R2W3 1325 aa10.8□□□□□ -0.68
AP001042.1-201ENST00000416842 CRB1P82279 1406 aa10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 COG3Q96JB2 828 aa10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 SGIP1Q9BQI5 828 aa10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 COL18A1P39060 1754 aa10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 RGPD5Q99666 1765 aa10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 COL3A1P02461 1466 aaPredicted RBP10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 USP19O94966 1318 aa10.79□□□□□ -0.68
AP001042.1-201ENST00000416842 SHANK3Q9BYB0 1731 aa10.78□□□□□ -0.68
AP001042.1-201ENST00000416842 CAPN15O75808 1086 aa10.78□□□□□ -0.68
AP001042.1-201ENST00000416842 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
AP001042.1-201ENST00000416842 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
AP001042.1-201ENST00000416842 PAPPAQ13219 1627 aa10.77□□□□□ -0.68
AP001042.1-201ENST00000416842 GIGYF1O75420 1035 aaPredicted RBP10.77□□□□□ -0.69
AP001042.1-201ENST00000416842 TNNT2P45379 298 aaPredicted RBP10.77□□□□□ -0.69
AP001042.1-201ENST00000416842 STK32BQ9NY57 414 aa10.77□□□□□ -0.69
AP001042.1-201ENST00000416842 MAP3K5Q99683 1374 aa10.77□□□□□ -0.69
AP001042.1-201ENST00000416842 BCL9O00512 1426 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 COL24A1Q17RW2 1714 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 FBLN1P23142 703 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 SLC15A2Q16348 729 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 DDB1Q16531 1140 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 TXNRD1Q16881 649 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 NGEFQ8N5V2 710 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 ABTB2Q8N961 1025 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 CFAP53Q96M91 514 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 MTFR1LQ9H019 292 aa10.76□□□□□ -0.69
AP001042.1-201ENST00000416842 GCP02774 474 aa10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 IL13P35225 146 aa10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 MARCH10Q8NA82 808 aaPredicted RBP10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 ZNF521Q96K83 1311 aa10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 NHSQ6T4R5 1651 aa10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 USP54Q70EL1 1684 aa10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
AP001042.1-201ENST00000416842 KIF20BQ96Q89 1820 aa10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 ARXQ96QS3 562 aa10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 PLEKHF1Q96S99 279 aa10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 QSER1Q2KHR3 1735 aa10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 KIF24Q5T7B8 1368 aa10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 SLIT3O75094 1523 aa10.74□□□□□ -0.69
AP001042.1-201ENST00000416842 BTAF1O14981 1849 aa10.73□□□□□ -0.69
AP001042.1-201ENST00000416842 TUBGCP6Q96RT7 1819 aa10.73□□□□□ -0.69
AP001042.1-201ENST00000416842 DIAPH1O60610 1272 aaKnown RBP10.73□□□□□ -0.69
AP001042.1-201ENST00000416842 GPR162Q16538 588 aa10.73□□□□□ -0.69
AP001042.1-201ENST00000416842 ZBTB7CA1YPR0 619 aa10.72□□□□□ -0.69
AP001042.1-201ENST00000416842 NLRP6P59044 892 aa10.72□□□□□ -0.69
AP001042.1-201ENST00000416842 TOM1L2Q6ZVM7 507 aa10.72□□□□□ -0.69
AP001042.1-201ENST00000416842 PIK3C2AO00443 1686 aa10.71□□□□□ -0.69
AP001042.1-201ENST00000416842 FCHSD2O94868 740 aa10.71□□□□□ -0.69
AP001042.1-201ENST00000416842 RRS1Q15050 365 aaKnown RBP10.71□□□□□ -0.69
AP001042.1-201ENST00000416842 MAP3K19Q56UN5 1328 aa10.71□□□□□ -0.69
AP001042.1-201ENST00000416842 TRMT2AQ8IZ69 625 aaKnown RBP10.71□□□□□ -0.69
AP001042.1-201ENST00000416842 RUNDC1Q96C34 613 aa10.71□□□□□ -0.69
AP001042.1-201ENST00000416842 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
AP001042.1-201ENST00000416842 WDR17Q8IZU2 1322 aa10.7□□□□□ -0.7
AP001042.1-201ENST00000416842 CEP350Q5VT06 3117 aa10.69□□□□□ -0.7
AP001042.1-201ENST00000416842 APAF1O14727 1248 aa10.69□□□□□ -0.7
AP001042.1-201ENST00000416842 CCDC27Q2M243 656 aa10.69□□□□□ -0.7
AP001042.1-201ENST00000416842 KCNH5Q8NCM2 988 aa10.69□□□□□ -0.7
AP001042.1-201ENST00000416842 CDCA7Q9BWT1 371 aaPredicted RBP10.69□□□□□ -0.7
AP001042.1-201ENST00000416842 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
AP001042.1-201ENST00000416842 MAP2P11137 1827 aaKnown RBP10.69□□□□□ -0.7
AP001042.1-201ENST00000416842 EIF4A2Q14240 407 aaKnown RBP10.68□□□□□ -0.7
AP001042.1-201ENST00000416842 ZNF827Q17R98 1081 aa10.68□□□□□ -0.7
AP001042.1-201ENST00000416842 HSP90AB2PQ58FF8 381 aa10.68□□□□□ -0.7
AP001042.1-201ENST00000416842 ARHGEF25Q86VW2 580 aa10.68□□□□□ -0.7
AP001042.1-201ENST00000416842 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
AP001042.1-201ENST00000416842 RSPH6AQ9H0K4 717 aa10.68□□□□□ -0.7
AP001042.1-201ENST00000416842 NFAT5O94916 1531 aa10.68□□□□□ -0.7
AP001042.1-201ENST00000416842 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
AP001042.1-201ENST00000416842 U2AF1L5P0DN76 240 aaPredicted RBP10.67□□□□□ -0.7
AP001042.1-201ENST00000416842 U2AF1Q01081 240 aaKnown RBP eCLIP10.67□□□□□ -0.7
AP001042.1-201ENST00000416842 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
AP001042.1-201ENST00000416842 IP6K1Q92551 441 aa10.67□□□□□ -0.7
AP001042.1-201ENST00000416842 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
AP001042.1-201ENST00000416842 ABCC6O95255 1503 aa10.67□□□□□ -0.7
AP001042.1-201ENST00000416842 FLT4P35916 1363 aa10.66□□□□□ -0.7
AP001042.1-201ENST00000416842 HOXC9P31274 260 aa10.66□□□□□ -0.7
AP001042.1-201ENST00000416842 CCDC146Q8IYE0 955 aa10.66□□□□□ -0.7
AP001042.1-201ENST00000416842 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
AP001042.1-201ENST00000416842 RTL1A6NKG5 1358 aa10.65□□□□□ -0.7
AP001042.1-201ENST00000416842 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
AP001042.1-201ENST00000416842 EXOC5O00471 708 aa10.65□□□□□ -0.7
AP001042.1-201ENST00000416842 WWC1Q8IX03 1113 aa10.65□□□□□ -0.7
AP001042.1-201ENST00000416842 ACSBG1Q96GR2 724 aa10.65□□□□□ -0.7
AP001042.1-201ENST00000416842 CARD10Q9BWT7 1032 aa10.65□□□□□ -0.7
AP001042.1-201ENST00000416842 ATP10DQ9P241 1426 aa10.65□□□□□ -0.7
AP001042.1-201ENST00000416842 PPM1GO15355 546 aaPredicted RBP10.64□□□□□ -0.71
AP001042.1-201ENST00000416842 YBX3P16989 372 aaKnown RBP eCLIP10.64□□□□□ -0.71
AP001042.1-201ENST00000416842 TMPOP42166 694 aaKnown RBP10.64□□□□□ -0.71
AP001042.1-201ENST00000416842 SLFN5Q08AF3 891 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms