RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PRR12Q9ULL5 1215 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 MRPL42Q9Y6G3 142 aaKnown RBP4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 RPS6KL1Q9Y6S9 549 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 H3BRB1 525 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 KIF3BO15066 747 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 ST18O60284 1047 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 PHF14O94880 888 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 PDGFRBP09619 1106 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 BDNFP23560 247 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 ZNF76P36508 570 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 GYS2P54840 703 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 FOXK1P85037 733 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 UBE4AQ14139 1066 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 SWI5Q1ZZU3 235 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 PRPF38BQ5VTL8 546 aaKnown RBP4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 RSBN1LQ6PCB5 846 aaPredicted RBP4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 METTL3Q86U44 580 aaKnown RBP4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 NUTM1Q86Y26 1132 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 RGL4Q8IZJ4 473 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 TUT1Q9H6E5 874 aaKnown RBP4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 ANAPC4Q9UJX5 808 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 INPP5FQ9Y2H2 1132 aa4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.03□□□□□ -1.76
CTDSPL-203ENST00000416688 USP17L15C9J2P7 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L10C9JJH3 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L13C9JLJ4 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L12C9JPN9 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L11C9JVI0 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L21D6R901 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L18D6R9N7 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L22D6RA61 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L17D6RBQ6 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L19D6RCP7 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L20D6RJB6 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 C21orf2O43822 256 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 ZNF500O60304 480 aaPredicted RBP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 ICMTO60725 284 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 GIGYF1O75420 1035 aaPredicted RBP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 PPP4CP60510 307 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 FANCCQ00597 558 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 POU5F1BQ06416 359 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L24Q0WX57 530 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 ENOX2Q16206 610 aaKnown RBP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 ODR4Q5SWX8 454 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 NBPF6Q5VWK0 638 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 RPUSD2Q8IZ73 545 aaKnown RBP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 SDR16C5Q8N3Y7 309 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 SPIRE2Q8WWL2 714 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 NBPF4Q96M43 638 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 ACBD3Q9H3P7 528 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 QTRT2Q9H974 415 aaKnown RBP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 SCINQ9Y6U3 715 aa4.02□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L3A6NCW0 530 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L4A6NCW7 530 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 SORBS3O60504 671 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 CAND2O75155 1236 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 CD53P19397 219 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 POU5F1Q01860 360 aaKnown RBP4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 LMOD3Q0VAK6 560 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 BRD3Q15059 726 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 VPS72Q15906 364 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 QPCTQ16769 361 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 GLIPR1L2Q4G1C9 344 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PLEKHG4Q58EX7 1191 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 L1TD1Q5T7N2 865 aaKnown RBP4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L2Q6R6M4 530 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 USP17L1Q7RTZ2 530 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PLEKHM2Q8IWE5 1019 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 CKAP2LQ8IYA6 745 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PAF1Q8N7H5 531 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PDILTQ8N807 584 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PPM1EQ8WY54 764 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PAGR1Q9BTK6 254 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 TMEM121BQ9BXQ6 578 aaPredicted RBP4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 PCDH10Q9P2E7 1040 aa4.01□□□□□ -1.77
CTDSPL-203ENST00000416688 ATP5J2-PTCD1G3V325 749 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 K7ELQ4 463 aaPredicted RBP4□□□□□ -1.77
CTDSPL-203ENST00000416688 NPHP1O15259 732 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 EPB41L2O43491 1005 aaKnown RBP4□□□□□ -1.77
CTDSPL-203ENST00000416688 NRDCO43847 1150 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 KRT18P05783 430 aaKnown RBP4□□□□□ -1.77
CTDSPL-203ENST00000416688 VIL1P09327 827 aaKnown RBP4□□□□□ -1.77
CTDSPL-203ENST00000416688 RASA1P20936 1047 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 FAM69CQ0P6D2 419 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 PDE3BQ13370 1112 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 SF3B2Q13435 895 aaKnown RBP4□□□□□ -1.77
CTDSPL-203ENST00000416688 DHX8Q14562 1220 aaKnown RBP4□□□□□ -1.77
CTDSPL-203ENST00000416688 LDLRAD1Q5T700 205 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 CCDC174Q6PII3 467 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 CASC1Q6TDU7 716 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 FERMT3Q86UX7 667 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 ZNF654Q8IZM8 581 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 SAMD3Q8N6K7 520 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 HELBQ8NG08 1087 aaPredicted RBP4□□□□□ -1.77
CTDSPL-203ENST00000416688 MKL1Q969V6 931 aa4□□□□□ -1.77
CTDSPL-203ENST00000416688 IL17RAQ96F46 866 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms